RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 CT47A1Q5JQC4 288 aaPredicted RBP12.96□□□□□ -0.33
TNXB-201ENST00000375244 BICD2Q8TD16 824 aa12.96□□□□□ -0.34
TNXB-201ENST00000375244 MAP7D2Q96T17 732 aa12.96□□□□□ -0.34
TNXB-201ENST00000375244 FMN1Q68DA7 1419 aa12.96□□□□□ -0.34
TNXB-201ENST00000375244 ZKSCAN2Q63HK3 967 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.347e-11■■■■■ 260.8
TNXB-201ENST00000375244 FBXW7Q969H0 707 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
TNXB-201ENST00000375244 NFXL1Q6ZNB6 911 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 ROCK1Q13464 1354 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 APPP05067 770 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 MNS1Q8NEH6 495 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 ODF2Q5BJF6 829 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 RNF20Q5VTR2 975 aa12.95□□□□□ -0.34
TNXB-201ENST00000375244 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
TNXB-201ENST00000375244 VPS37DQ86XT2 251 aa12.94□□□□□ -0.34
TNXB-201ENST00000375244 HSP90B2PQ58FF3 399 aa12.94□□□□□ -0.34
TNXB-201ENST00000375244 TRDNQ13061 729 aa12.94□□□□□ -0.34
TNXB-201ENST00000375244 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
TNXB-201ENST00000375244 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
TNXB-201ENST00000375244 IFT57Q9NWB7 429 aa12.93□□□□□ -0.34
TNXB-201ENST00000375244 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
TNXB-201ENST00000375244 NEXNQ0ZGT2 675 aa12.93□□□□□ -0.34
TNXB-201ENST00000375244 CWC15Q9P013 229 aaKnown RBP12.92□□□□□ -0.34
TNXB-201ENST00000375244 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
TNXB-201ENST00000375244 MYO6Q9UM54 1294 aa12.92□□□□□ -0.34
TNXB-201ENST00000375244 MYBBP1AQ9BQG0 1328 aaKnown RBP12.92□□□□□ -0.34
TNXB-201ENST00000375244 CCDC73Q6ZRK6 1079 aa12.92□□□□□ -0.34
TNXB-201ENST00000375244 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNXB-201ENST00000375244 SASS6Q6UVJ0 657 aa12.91□□□□□ -0.34
TNXB-201ENST00000375244 PDE4AP27815 886 aa12.91□□□□□ -0.34
TNXB-201ENST00000375244 IFIT2P09913 472 aaKnown RBP12.91□□□□□ -0.34
TNXB-201ENST00000375244 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
TNXB-201ENST00000375244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
TNXB-201ENST00000375244 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNXB-201ENST00000375244 CAGE1Q8TC20 777 aa12.9□□□□□ -0.34
TNXB-201ENST00000375244 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
TNXB-201ENST00000375244 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
TNXB-201ENST00000375244 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
TNXB-201ENST00000375244 E9PSI1 815 aa12.9□□□□□ -0.34
TNXB-201ENST00000375244 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
TNXB-201ENST00000375244 NAT10Q9H0A0 1025 aaKnown RBP12.9□□□□□ -0.34
TNXB-201ENST00000375244 COG3Q96JB2 828 aa12.9□□□□□ -0.34
TNXB-201ENST00000375244 ERICH2A1L162 156 aa12.9□□□□□ -0.34
TNXB-201ENST00000375244 RRP1P56182 461 aaKnown RBP12.89□□□□□ -0.35
TNXB-201ENST00000375244 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
TNXB-201ENST00000375244 ZBED9Q6R2W3 1325 aa12.89□□□□□ -0.35
TNXB-201ENST00000375244 NUCB2P80303 420 aa12.89□□□□□ -0.35
TNXB-201ENST00000375244 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
TNXB-201ENST00000375244 FOSBP53539 338 aa12.89□□□□□ -0.35
TNXB-201ENST00000375244 HSP90AB2PQ58FF8 381 aa12.88□□□□□ -0.35
TNXB-201ENST00000375244 H0YHG0 523 aa12.88□□□□□ -0.35
TNXB-201ENST00000375244 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
TNXB-201ENST00000375244 CCDC18Q5T9S5 1454 aa12.88□□□□□ -0.35
TNXB-201ENST00000375244 OFD1O75665 1012 aa12.88□□□□□ -0.35
TNXB-201ENST00000375244 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
TNXB-201ENST00000375244 PANK3Q9H999 370 aa12.87□□□□□ -0.35
TNXB-201ENST00000375244 MTERF4Q7Z6M4 381 aaKnown RBP12.87□□□□□ -0.35
TNXB-201ENST00000375244 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
TNXB-201ENST00000375244 EVA1CP58658 441 aa12.87□□□□□ -0.35
TNXB-201ENST00000375244 PLIN1O60240 522 aa12.87□□□□□ -0.35
TNXB-201ENST00000375244 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
TNXB-201ENST00000375244 DDX19BQ9UMR2 479 aa12.87□□□□□ -0.35
TNXB-201ENST00000375244 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNXB-201ENST00000375244 NASPP49321 788 aaPredicted RBP12.86□□□□□ -0.35
TNXB-201ENST00000375244 ERCC4Q92889 916 aaPredicted RBP12.86□□□□□ -0.35
TNXB-201ENST00000375244 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
TNXB-201ENST00000375244 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
TNXB-201ENST00000375244 WASHC2CQ9Y4E1 1318 aa12.86□□□□□ -0.35
TNXB-201ENST00000375244 NGEFQ8N5V2 710 aa12.86□□□□□ -0.35
TNXB-201ENST00000375244 CCDC39Q9UFE4 941 aa12.86□□□□□ -0.35
TNXB-201ENST00000375244 INTS3Q68E01 1043 aaKnown RBP12.86□□□□□ -0.35
TNXB-201ENST00000375244 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
TNXB-201ENST00000375244 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
TNXB-201ENST00000375244 TEFQ10587 303 aa12.85□□□□□ -0.35
TNXB-201ENST00000375244 NINLQ9Y2I6 1382 aa12.85□□□□□ -0.35
TNXB-201ENST00000375244 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
TNXB-201ENST00000375244 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
TNXB-201ENST00000375244 ZFYVE27Q5T4F4 411 aa12.84□□□□□ -0.35
TNXB-201ENST00000375244 EFCAB2Q5VUJ9 269 aa12.84□□□□□ -0.35
TNXB-201ENST00000375244 EVC2Q86UK5 1308 aa12.84□□□□□ -0.35
TNXB-201ENST00000375244 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
TNXB-201ENST00000375244 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
TNXB-201ENST00000375244 ERC2O15083 957 aa12.84□□□□□ -0.35
TNXB-201ENST00000375244 ZRSR2Q15696 482 aaKnown RBP12.84□□□□□ -0.35
TNXB-201ENST00000375244 EIF2S2P20042 333 aaKnown RBP12.84□□□□□ -0.35
TNXB-201ENST00000375244 CCP110O43303 1012 aa12.83□□□□□ -0.36
TNXB-201ENST00000375244 PDILTQ8N807 584 aa12.83□□□□□ -0.36
TNXB-201ENST00000375244 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
TNXB-201ENST00000375244 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.36
TNXB-201ENST00000375244 KIF3BO15066 747 aa12.83□□□□□ -0.36
TNXB-201ENST00000375244 SOGA1O94964 1423 aa12.83□□□□□ -0.36
TNXB-201ENST00000375244 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
TNXB-201ENST00000375244 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
TNXB-201ENST00000375244 MSH5O43196 834 aa12.82□□□□□ -0.36
TNXB-201ENST00000375244 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
TNXB-201ENST00000375244 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
TNXB-201ENST00000375244 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
TNXB-201ENST00000375244 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms