RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SYNMO15061 1565 aa24.92■■□□□ 1.58
HLA-DQB1-201ENST00000374943 PREX1Q8TCU6 1659 aa24.89■■□□□ 1.58
HLA-DQB1-201ENST00000374943 PRKRIP1Q9H875 184 aaPredicted RBP24.89■■□□□ 1.58
HLA-DQB1-201ENST00000374943 ARHGEF40Q8TER5 1519 aa24.88■■□□□ 1.57
HLA-DQB1-201ENST00000374943 SCAF11Q99590 1463 aaKnown RBP24.87■■□□□ 1.57
HLA-DQB1-201ENST00000374943 TESK2Q96S53 571 aa24.85■■□□□ 1.57
HLA-DQB1-201ENST00000374943 GTF3C3Q9Y5Q9 886 aa24.84■■□□□ 1.57
HLA-DQB1-201ENST00000374943 SETBP1Q9Y6X0 1596 aa24.83■■□□□ 1.57
HLA-DQB1-201ENST00000374943 MYO3AQ8NEV4 1616 aa24.8■■□□□ 1.56
HLA-DQB1-201ENST00000374943 RPGRIP1LQ68CZ1 1315 aa24.79■■□□□ 1.56
HLA-DQB1-201ENST00000374943 POLR3GLQ9BT43 218 aa24.78■■□□□ 1.56
HLA-DQB1-201ENST00000374943 PPP6R1Q9UPN7 881 aa24.78■■□□□ 1.56
HLA-DQB1-201ENST00000374943 EIF3AQ14152 1382 aaKnown RBP24.77■■□□□ 1.56
HLA-DQB1-201ENST00000374943 DISP3Q9P2K9 1392 aa24.77■■□□□ 1.56
HLA-DQB1-201ENST00000374943 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
HLA-DQB1-201ENST00000374943 CLTCQ00610 1675 aaKnown RBP24.77■■□□□ 1.56
HLA-DQB1-201ENST00000374943 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
HLA-DQB1-201ENST00000374943 ADGRF5Q8IZF2 1346 aa24.76■■□□□ 1.55
HLA-DQB1-201ENST00000374943 PIK3C2GO75747 1445 aa24.76■■□□□ 1.55
HLA-DQB1-201ENST00000374943 KTN1Q86UP2 1357 aaKnown RBP24.75■■□□□ 1.55
HLA-DQB1-201ENST00000374943 TMF1P82094 1093 aa24.75■■□□□ 1.55
HLA-DQB1-201ENST00000374943 TMEM131LA2VDJ0 1609 aa24.74■■□□□ 1.55
HLA-DQB1-201ENST00000374943 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
HLA-DQB1-201ENST00000374943 ERVK-7P63135 1459 aa24.71■■□□□ 1.55
HLA-DQB1-201ENST00000374943 KDM5AP29375 1690 aaKnown RBP24.7■■□□□ 1.54
HLA-DQB1-201ENST00000374943 ADGRB1O14514 1584 aa24.7■■□□□ 1.54
HLA-DQB1-201ENST00000374943 CHGAP10645 457 aaKnown RBP24.69■■□□□ 1.54
HLA-DQB1-201ENST00000374943 CFAP70Q5T0N1 1121 aa24.69■■□□□ 1.54
HLA-DQB1-201ENST00000374943 ZFYVE9O95405 1425 aa24.68■■□□□ 1.54
HLA-DQB1-201ENST00000374943 SPATA31D1Q6ZQQ2 1576 aa24.68■■□□□ 1.54
HLA-DQB1-201ENST00000374943 MYOM1P52179 1685 aa24.68■■□□□ 1.54
HLA-DQB1-201ENST00000374943 CCDC184Q52MB2 194 aa24.66■■□□□ 1.54
HLA-DQB1-201ENST00000374943 SLC24A1O60721 1099 aa24.66■■□□□ 1.54
HLA-DQB1-201ENST00000374943 SBNO2Q9Y2G9 1366 aa24.65■■□□□ 1.54
HLA-DQB1-201ENST00000374943 MRS2Q9HD23 443 aa24.65■■□□□ 1.54
HLA-DQB1-201ENST00000374943 IDI1Q13907 227 aa24.64■■□□□ 1.53
HLA-DQB1-201ENST00000374943 CDCA8Q53HL2 280 aa24.64■■□□□ 1.53
HLA-DQB1-201ENST00000374943 C14orf93Q9H972 538 aaKnown RBP24.64■■□□□ 1.53
HLA-DQB1-201ENST00000374943 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
HLA-DQB1-201ENST00000374943 RALBP1Q15311 655 aa24.62■■□□□ 1.53
HLA-DQB1-201ENST00000374943 PER1O15534 1290 aaPredicted RBP24.61■■□□□ 1.53
HLA-DQB1-201ENST00000374943 PARD3Q8TEW0 1356 aa24.6■■□□□ 1.53
HLA-DQB1-201ENST00000374943 ARHGEF28Q8N1W1 1705 aaKnown RBP24.6■■□□□ 1.53
HLA-DQB1-201ENST00000374943 VGFO15240 615 aaPredicted RBP24.59■■□□□ 1.53
HLA-DQB1-201ENST00000374943 MYBBP1AQ9BQG0 1328 aaKnown RBP24.57■■□□□ 1.52
HLA-DQB1-201ENST00000374943 BRD4O60885 1362 aaPredicted RBP24.56■■□□□ 1.52
HLA-DQB1-201ENST00000374943 HNRNPUQ00839 825 aaKnown RBP eCLIP24.55■■□□□ 1.52
HLA-DQB1-201ENST00000374943 FBXO31Q5XUX0 539 aaPredicted RBP24.54■■□□□ 1.52
HLA-DQB1-201ENST00000374943 PANK3Q9H999 370 aa24.53■■□□□ 1.52
HLA-DQB1-201ENST00000374943 ILDR1Q86SU0 546 aaPredicted RBP24.52■■□□□ 1.52
HLA-DQB1-201ENST00000374943 ASXL1Q8IXJ9 1541 aa24.51■■□□□ 1.51
HLA-DQB1-201ENST00000374943 CENPJQ9HC77 1338 aaPredicted RBP24.51■■□□□ 1.51
HLA-DQB1-201ENST00000374943 FAM9BQ8IZU0 186 aa24.5■■□□□ 1.51
HLA-DQB1-201ENST00000374943 A2ML1A8K2U0 1454 aa24.49■■□□□ 1.51
HLA-DQB1-201ENST00000374943 MLECQ14165 292 aa24.46■■□□□ 1.51
HLA-DQB1-201ENST00000374943 ZMYM3Q14202 1370 aa24.45■■□□□ 1.5
HLA-DQB1-201ENST00000374943 ZBED9Q6R2W3 1325 aa24.45■■□□□ 1.5
HLA-DQB1-201ENST00000374943 NLRP13Q86W25 1043 aa24.45■■□□□ 1.5
HLA-DQB1-201ENST00000374943 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
HLA-DQB1-201ENST00000374943 LRPPRCP42704 1394 aaKnown RBP24.44■■□□□ 1.5
HLA-DQB1-201ENST00000374943 NPC1L1Q9UHC9 1359 aa24.44■■□□□ 1.5
HLA-DQB1-201ENST00000374943 TMC1Q8TDI8 760 aa24.44■■□□□ 1.5
HLA-DQB1-201ENST00000374943 PNISRQ8TF01 805 aaKnown RBP24.44■■□□□ 1.5
HLA-DQB1-201ENST00000374943 ALKQ9UM73 1620 aa24.44■■□□□ 1.5
HLA-DQB1-201ENST00000374943 CNGB1Q14028 1251 aaPredicted RBP24.43■■□□□ 1.5
HLA-DQB1-201ENST00000374943 TRAK1Q9UPV9 953 aa24.43■■□□□ 1.5
HLA-DQB1-201ENST00000374943 TMEM132EQ6IEE7 984 aa24.42■■□□□ 1.5
HLA-DQB1-201ENST00000374943 NUTM2DQ5VT03 806 aaPredicted RBP24.41■■□□□ 1.5
HLA-DQB1-201ENST00000374943 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
HLA-DQB1-201ENST00000374943 KNSTRNQ9Y448 316 aa24.39■■□□□ 1.49
HLA-DQB1-201ENST00000374943 RIMS2Q9UQ26 1411 aa24.38■■□□□ 1.49
HLA-DQB1-201ENST00000374943 PUS7Q96PZ0 661 aaKnown RBP24.38■■□□□ 1.49
HLA-DQB1-201ENST00000374943 TULP4Q9NRJ4 1543 aa24.38■■□□□ 1.49
HLA-DQB1-201ENST00000374943 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
HLA-DQB1-201ENST00000374943 AMER1Q5JTC6 1135 aaPredicted RBP24.37■■□□□ 1.49
HLA-DQB1-201ENST00000374943 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
HLA-DQB1-201ENST00000374943 PTPRMP28827 1452 aa24.37■■□□□ 1.49
HLA-DQB1-201ENST00000374943 USP32Q8NFA0 1604 aa24.36■■□□□ 1.49
HLA-DQB1-201ENST00000374943 NRXN3Q9Y4C0 1643 aa24.36■■□□□ 1.49
HLA-DQB1-201ENST00000374943 INSRP06213 1382 aa24.36■■□□□ 1.49
HLA-DQB1-201ENST00000374943 CC2D1BQ5T0F9 858 aaKnown RBP24.36■■□□□ 1.49
HLA-DQB1-201ENST00000374943 FER1L4A9Z1Z3 1794 aa24.35■■□□□ 1.49
HLA-DQB1-201ENST00000374943 TNRQ92752 1358 aa24.35■■□□□ 1.49
HLA-DQB1-201ENST00000374943 YTHDC2Q9H6S0 1430 aaKnown RBP24.35■■□□□ 1.49
HLA-DQB1-201ENST00000374943 DLC1Q96QB1 1528 aa24.34■■□□□ 1.49
HLA-DQB1-201ENST00000374943 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
HLA-DQB1-201ENST00000374943 C3P01024 1663 aa24.32■■□□□ 1.48
HLA-DQB1-201ENST00000374943 EVC2Q86UK5 1308 aa24.3■■□□□ 1.48
HLA-DQB1-201ENST00000374943 KNDC1Q76NI1 1749 aa24.29■■□□□ 1.48
HLA-DQB1-201ENST00000374943 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
HLA-DQB1-201ENST00000374943 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.28■■□□□ 1.48
HLA-DQB1-201ENST00000374943 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
HLA-DQB1-201ENST00000374943 PPP2R1AP30153 589 aa24.24■■□□□ 1.47
HLA-DQB1-201ENST00000374943 CARD14Q9BXL6 1004 aa24.24■■□□□ 1.47
HLA-DQB1-201ENST00000374943 NINLQ9Y2I6 1382 aa24.24■■□□□ 1.47
HLA-DQB1-201ENST00000374943 SMG6Q86US8 1419 aaKnown RBP24.22■■□□□ 1.47
HLA-DQB1-201ENST00000374943 NEFLP07196 543 aa24.21■■□□□ 1.47
HLA-DQB1-201ENST00000374943 ADAMTSL3P82987 1691 aa24.21■■□□□ 1.47
HLA-DQB1-201ENST00000374943 HDGFP51858 240 aaKnown RBP24.21■■□□□ 1.47
HLA-DQB1-201ENST00000374943 STK26Q9P289 416 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms