RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 DIP2CQ9Y2E4 1556 aa22.83■■□□□ 1.24
PHF1-202ENST00000374516 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
PHF1-202ENST00000374516 CFAP70Q5T0N1 1121 aa22.8■■□□□ 1.24
PHF1-202ENST00000374516 DIP2BQ9P265 1576 aa22.8■■□□□ 1.24
PHF1-202ENST00000374516 TMF1P82094 1093 aa22.8■■□□□ 1.24
PHF1-202ENST00000374516 ABCC3O15438 1527 aa22.79■■□□□ 1.24
PHF1-202ENST00000374516 TSPOAP1O95153 1857 aa22.78■■□□□ 1.24
PHF1-202ENST00000374516 COL17A1Q9UMD9 1497 aaPredicted RBP22.78■■□□□ 1.24
PHF1-202ENST00000374516 KIF1BO60333 1816 aa22.77■■□□□ 1.23
PHF1-202ENST00000374516 MROH2AA6NES4 1674 aa22.74■■□□□ 1.23
PHF1-202ENST00000374516 NEURL4Q96JN8 1562 aa22.73■■□□□ 1.23
PHF1-202ENST00000374516 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
PHF1-202ENST00000374516 PANK3Q9H999 370 aa22.73■■□□□ 1.23
PHF1-202ENST00000374516 PER1O15534 1290 aaPredicted RBP22.72■■□□□ 1.23
PHF1-202ENST00000374516 NOS1P29475 1434 aa22.72■■□□□ 1.23
PHF1-202ENST00000374516 MYOM2P54296 1465 aa22.71■■□□□ 1.23
PHF1-202ENST00000374516 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
PHF1-202ENST00000374516 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
PHF1-202ENST00000374516 CAMSAP1Q5T5Y3 1602 aa22.7■■□□□ 1.22
PHF1-202ENST00000374516 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
PHF1-202ENST00000374516 ADGRB3O60242 1522 aa22.69■■□□□ 1.22
PHF1-202ENST00000374516 RALBP1Q15311 655 aa22.68■■□□□ 1.22
PHF1-202ENST00000374516 SIGLEC1Q9BZZ2 1709 aa22.67■■□□□ 1.22
PHF1-202ENST00000374516 CC2D1BQ5T0F9 858 aaKnown RBP22.67■■□□□ 1.22
PHF1-202ENST00000374516 SENP3-EIF4A1A0A087X0R7 540 aa22.66■■□□□ 1.22
PHF1-202ENST00000374516 MYBBP1AQ9BQG0 1328 aaKnown RBP22.66■■□□□ 1.22
PHF1-202ENST00000374516 IDI1Q13907 227 aa22.65■■□□□ 1.22
PHF1-202ENST00000374516 IFT172Q9UG01 1749 aa22.65■■□□□ 1.22
PHF1-202ENST00000374516 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
PHF1-202ENST00000374516 NOP58Q9Y2X3 529 aaKnown RBP22.65■■□□□ 1.22
PHF1-202ENST00000374516 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.22
PHF1-202ENST00000374516 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.22
PHF1-202ENST00000374516 KTN1Q86UP2 1357 aaKnown RBP22.64■■□□□ 1.22
PHF1-202ENST00000374516 DEKP35659 375 aaKnown RBP22.64■■□□□ 1.22
PHF1-202ENST00000374516 ZMYM4Q5VZL5 1548 aa22.63■■□□□ 1.21
PHF1-202ENST00000374516 NRXN1Q9ULB1 1477 aa22.63■■□□□ 1.21
PHF1-202ENST00000374516 KIAA1210Q9ULL0 1709 aa22.63■■□□□ 1.21
PHF1-202ENST00000374516 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
PHF1-202ENST00000374516 SYNMO15061 1565 aa22.62■■□□□ 1.21
PHF1-202ENST00000374516 FBXO31Q5XUX0 539 aaPredicted RBP22.62■■□□□ 1.21
PHF1-202ENST00000374516 TMEM132EQ6IEE7 984 aa22.62■■□□□ 1.21
PHF1-202ENST00000374516 ARHGAP31Q2M1Z3 1444 aa22.61■■□□□ 1.21
PHF1-202ENST00000374516 CDCA8Q53HL2 280 aa22.6■■□□□ 1.21
PHF1-202ENST00000374516 PARD3Q8TEW0 1356 aa22.6■■□□□ 1.21
PHF1-202ENST00000374516 TRAK1Q9UPV9 953 aa22.6■■□□□ 1.21
PHF1-202ENST00000374516 RNF123Q5XPI4 1314 aa22.6■■□□□ 1.21
PHF1-202ENST00000374516 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
PHF1-202ENST00000374516 MLECQ14165 292 aa22.59■■□□□ 1.21
PHF1-202ENST00000374516 DNAJC5Q9H3Z4 198 aa22.59■■□□□ 1.21
PHF1-202ENST00000374516 C14orf93Q9H972 538 aaKnown RBP22.59■■□□□ 1.21
PHF1-202ENST00000374516 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
PHF1-202ENST00000374516 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
PHF1-202ENST00000374516 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.2
PHF1-202ENST00000374516 PAK3O75914 559 aaPredicted RBP22.58■■□□□ 1.2
PHF1-202ENST00000374516 PPLO60437 1756 aa22.57■■□□□ 1.2
PHF1-202ENST00000374516 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
PHF1-202ENST00000374516 SLC52A1Q9NWF4 448 aa22.57■■□□□ 1.2
PHF1-202ENST00000374516 ZC3H13Q5T200 1668 aaKnown RBP22.56■■□□□ 1.2
PHF1-202ENST00000374516 CCDC136Q96JN2 1154 aa22.56■■□□□ 1.2
PHF1-202ENST00000374516 PIK3C2BO00750 1634 aa22.55■■□□□ 1.2
PHF1-202ENST00000374516 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
PHF1-202ENST00000374516 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
PHF1-202ENST00000374516 KIF13AQ9H1H9 1805 aa22.53■■□□□ 1.2
PHF1-202ENST00000374516 NBR1Q14596 966 aa22.52■■□□□ 1.2
PHF1-202ENST00000374516 CENPJQ9HC77 1338 aaPredicted RBP22.52■■□□□ 1.2
PHF1-202ENST00000374516 ERVK-7P63135 1459 aa22.51■■□□□ 1.19
PHF1-202ENST00000374516 IPO9Q96P70 1041 aaKnown RBP22.49■■□□□ 1.19
PHF1-202ENST00000374516 NEXMIFQ5QGS0 1516 aa22.49■■□□□ 1.19
PHF1-202ENST00000374516 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
PHF1-202ENST00000374516 PREX1Q8TCU6 1659 aa22.49■■□□□ 1.19
PHF1-202ENST00000374516 SETBP1Q9Y6X0 1596 aa22.49■■□□□ 1.19
PHF1-202ENST00000374516 ADGRB1O14514 1584 aa22.48■■□□□ 1.19
PHF1-202ENST00000374516 SLC24A1O60721 1099 aa22.48■■□□□ 1.19
PHF1-202ENST00000374516 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
PHF1-202ENST00000374516 AMER1Q5JTC6 1135 aaPredicted RBP22.48■■□□□ 1.19
PHF1-202ENST00000374516 STAG3Q9UJ98 1225 aa22.46■■□□□ 1.19
PHF1-202ENST00000374516 AGLP35573 1532 aa22.46■■□□□ 1.19
PHF1-202ENST00000374516 KDM5AP29375 1690 aaKnown RBP22.45■■□□□ 1.18
PHF1-202ENST00000374516 REREQ9P2R6 1566 aa22.44■■□□□ 1.18
PHF1-202ENST00000374516 PPP6R1Q9UPN7 881 aa22.44■■□□□ 1.18
PHF1-202ENST00000374516 MYOM1P52179 1685 aa22.44■■□□□ 1.18
PHF1-202ENST00000374516 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
PHF1-202ENST00000374516 STK26Q9P289 416 aa22.43■■□□□ 1.18
PHF1-202ENST00000374516 SALL2Q9Y467 1007 aaPredicted RBP22.43■■□□□ 1.18
PHF1-202ENST00000374516 SBNO2Q9Y2G9 1366 aa22.43■■□□□ 1.18
PHF1-202ENST00000374516 ZBTB47Q9UFB7 747 aaPredicted RBP22.42■■□□□ 1.18
PHF1-202ENST00000374516 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
PHF1-202ENST00000374516 SAFB2Q14151 953 aaKnown RBP eCLIP22.42■■□□□ 1.18
PHF1-202ENST00000374516 CARD14Q9BXL6 1004 aa22.42■■□□□ 1.18
PHF1-202ENST00000374516 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
PHF1-202ENST00000374516 PPP2R1AP30153 589 aa22.41■■□□□ 1.18
PHF1-202ENST00000374516 MYO3AQ8NEV4 1616 aa22.4■■□□□ 1.18
PHF1-202ENST00000374516 ASXL1Q8IXJ9 1541 aa22.39■■□□□ 1.17
PHF1-202ENST00000374516 SLC12A5Q9H2X9 1139 aa22.39■■□□□ 1.17
PHF1-202ENST00000374516 ESF1Q9H501 851 aaKnown RBP22.39■■□□□ 1.17
PHF1-202ENST00000374516 ZFYVE9O95405 1425 aa22.38■■□□□ 1.17
PHF1-202ENST00000374516 ARHGEF40Q8TER5 1519 aa22.38■■□□□ 1.17
PHF1-202ENST00000374516 QRICH2Q9H0J4 1663 aa22.36■■□□□ 1.17
PHF1-202ENST00000374516 ADAMTS8Q9UP79 889 aa22.32■■□□□ 1.16
PHF1-202ENST00000374516 ZMYM3Q14202 1370 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms