RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.14
NIPAL3-204ENST00000374399 CHGAP10645 457 aaKnown RBP22.14■■□□□ 1.13
NIPAL3-204ENST00000374399 WASHC2AQ641Q2 1341 aa22.13■■□□□ 1.13
NIPAL3-204ENST00000374399 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
NIPAL3-204ENST00000374399 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
NIPAL3-204ENST00000374399 FER1L4A9Z1Z3 1794 aa22.1■■□□□ 1.13
NIPAL3-204ENST00000374399 DDX10Q13206 875 aaKnown RBP22.09■■□□□ 1.13
NIPAL3-204ENST00000374399 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
NIPAL3-204ENST00000374399 PIK3C2GO75747 1445 aa22.08■■□□□ 1.13
NIPAL3-204ENST00000374399 C3P01024 1663 aa22.08■■□□□ 1.12
NIPAL3-204ENST00000374399 IQGAP1P46940 1657 aa22.08■■□□□ 1.12
NIPAL3-204ENST00000374399 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
NIPAL3-204ENST00000374399 MIER1Q8N108 512 aa22.06■■□□□ 1.12
NIPAL3-204ENST00000374399 CCDC7Q96M83 1385 aa22.06■■□□□ 1.12
NIPAL3-204ENST00000374399 A2ML1A8K2U0 1454 aa22.05■■□□□ 1.12
NIPAL3-204ENST00000374399 ZFYVE9O95405 1425 aa22.04■■□□□ 1.12
NIPAL3-204ENST00000374399 CFAP70Q5T0N1 1121 aa22.04■■□□□ 1.12
NIPAL3-204ENST00000374399 KIF7Q2M1P5 1343 aa22.03■■□□□ 1.12
NIPAL3-204ENST00000374399 TNRQ92752 1358 aa22.02■■□□□ 1.12
NIPAL3-204ENST00000374399 CEBPAP49715 358 aaPredicted RBP22.01■■□□□ 1.11
NIPAL3-204ENST00000374399 NUTM2DQ5VT03 806 aaPredicted RBP22.01■■□□□ 1.11
NIPAL3-204ENST00000374399 SETBP1Q9Y6X0 1596 aa22■■□□□ 1.11
NIPAL3-204ENST00000374399 C14orf93Q9H972 538 aaKnown RBP22■■□□□ 1.11
NIPAL3-204ENST00000374399 ADGRB1O14514 1584 aa22■■□□□ 1.11
NIPAL3-204ENST00000374399 ADAMTSL3P82987 1691 aa21.99■■□□□ 1.11
NIPAL3-204ENST00000374399 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
NIPAL3-204ENST00000374399 TESK2Q96S53 571 aa21.98■■□□□ 1.11
NIPAL3-204ENST00000374399 KDM5AP29375 1690 aaKnown RBP21.98■■□□□ 1.11
NIPAL3-204ENST00000374399 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
NIPAL3-204ENST00000374399 UBR1Q8IWV7 1749 aa21.97■■□□□ 1.11
NIPAL3-204ENST00000374399 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
NIPAL3-204ENST00000374399 RIMS2Q9UQ26 1411 aa21.93■■□□□ 1.1
NIPAL3-204ENST00000374399 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
NIPAL3-204ENST00000374399 STAG3Q9UJ98 1225 aa21.92■■□□□ 1.1
NIPAL3-204ENST00000374399 NLRP1Q9C000 1473 aa21.92■■□□□ 1.1
NIPAL3-204ENST00000374399 MYO3AQ8NEV4 1616 aa21.9■■□□□ 1.1
NIPAL3-204ENST00000374399 DISP3Q9P2K9 1392 aa21.9■■□□□ 1.1
NIPAL3-204ENST00000374399 SETD1AO15047 1707 aaKnown RBP21.88■■□□□ 1.09
NIPAL3-204ENST00000374399 TMEM132EQ6IEE7 984 aa21.88■■□□□ 1.09
NIPAL3-204ENST00000374399 NRXN3Q9Y4C0 1643 aa21.88■■□□□ 1.09
NIPAL3-204ENST00000374399 ALKQ9UM73 1620 aa21.87■■□□□ 1.09
NIPAL3-204ENST00000374399 PTPRMP28827 1452 aa21.86■■□□□ 1.09
NIPAL3-204ENST00000374399 TMEM2Q9UHN6 1383 aa21.85■■□□□ 1.09
NIPAL3-204ENST00000374399 ARHGEF28Q8N1W1 1705 aaKnown RBP21.84■■□□□ 1.09
NIPAL3-204ENST00000374399 EIF3AQ14152 1382 aaKnown RBP21.84■■□□□ 1.09
NIPAL3-204ENST00000374399 PLPPR3Q6T4P5 718 aa21.83■■□□□ 1.09
NIPAL3-204ENST00000374399 SENP3Q9H4L4 574 aaPredicted RBP21.83■■□□□ 1.09
NIPAL3-204ENST00000374399 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
NIPAL3-204ENST00000374399 SLIT1O75093 1534 aa21.8■■□□□ 1.08
NIPAL3-204ENST00000374399 ARHGAP23Q9P227 1491 aa21.8■■□□□ 1.08
NIPAL3-204ENST00000374399 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.8■■□□□ 1.08
NIPAL3-204ENST00000374399 TMF1P82094 1093 aa21.79■■□□□ 1.08
NIPAL3-204ENST00000374399 POLR3GLQ9BT43 218 aa21.79■■□□□ 1.08
NIPAL3-204ENST00000374399 SBNO2Q9Y2G9 1366 aa21.79■■□□□ 1.08
NIPAL3-204ENST00000374399 QRICH2Q9H0J4 1663 aa21.78■■□□□ 1.08
NIPAL3-204ENST00000374399 CEP170BQ9Y4F5 1589 aaPredicted RBP21.77■■□□□ 1.08
NIPAL3-204ENST00000374399 LTKP29376 864 aa21.77■■□□□ 1.08
NIPAL3-204ENST00000374399 YTHDC2Q9H6S0 1430 aaKnown RBP21.76■■□□□ 1.07
NIPAL3-204ENST00000374399 CENPJQ9HC77 1338 aaPredicted RBP21.76■■□□□ 1.07
NIPAL3-204ENST00000374399 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
NIPAL3-204ENST00000374399 SETD1BQ9UPS6 1966 aaKnown RBP21.74■■□□□ 1.07
NIPAL3-204ENST00000374399 ANP32CO43423 234 aa21.74■■□□□ 1.07
NIPAL3-204ENST00000374399 ADAMTS13Q76LX8 1427 aa21.73■■□□□ 1.07
NIPAL3-204ENST00000374399 MYOM1P52179 1685 aa21.73■■□□□ 1.07
NIPAL3-204ENST00000374399 METP08581 1390 aa21.72■■□□□ 1.07
NIPAL3-204ENST00000374399 HDGFP51858 240 aaKnown RBP21.72■■□□□ 1.07
NIPAL3-204ENST00000374399 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
NIPAL3-204ENST00000374399 MED14O60244 1454 aa21.7■■□□□ 1.06
NIPAL3-204ENST00000374399 STK26Q9P289 416 aa21.7■■□□□ 1.06
NIPAL3-204ENST00000374399 THEMISQ8N1K5 641 aaPredicted RBP21.69■■□□□ 1.06
NIPAL3-204ENST00000374399 LRPPRCP42704 1394 aaKnown RBP21.69■■□□□ 1.06
NIPAL3-204ENST00000374399 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
NIPAL3-204ENST00000374399 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
NIPAL3-204ENST00000374399 TULP4Q9NRJ4 1543 aa21.68■■□□□ 1.06
NIPAL3-204ENST00000374399 PER1O15534 1290 aaPredicted RBP21.67■■□□□ 1.06
NIPAL3-204ENST00000374399 PRKRIP1Q9H875 184 aaPredicted RBP21.67■■□□□ 1.06
NIPAL3-204ENST00000374399 SLC24A1O60721 1099 aa21.66■■□□□ 1.06
NIPAL3-204ENST00000374399 KNDC1Q76NI1 1749 aa21.66■■□□□ 1.06
NIPAL3-204ENST00000374399 ABCC11Q96J66 1382 aa21.66■■□□□ 1.06
NIPAL3-204ENST00000374399 CCER2I3L3R5 266 aa21.66■■□□□ 1.06
NIPAL3-204ENST00000374399 CDCA8Q53HL2 280 aa21.65■■□□□ 1.06
NIPAL3-204ENST00000374399 PRAM1Q96QH2 718 aa21.63■■□□□ 1.05
NIPAL3-204ENST00000374399 PANK3Q9H999 370 aa21.63■■□□□ 1.05
NIPAL3-204ENST00000374399 EID1Q9Y6B2 187 aa21.63■■□□□ 1.05
NIPAL3-204ENST00000374399 TECPR2O15040 1411 aa21.63■■□□□ 1.05
NIPAL3-204ENST00000374399 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
NIPAL3-204ENST00000374399 SAFB2Q14151 953 aaKnown RBP eCLIP21.6■■□□□ 1.05
NIPAL3-204ENST00000374399 CPS1P31327 1500 aa21.6■■□□□ 1.05
NIPAL3-204ENST00000374399 PTPRUQ92729 1446 aa21.59■■□□□ 1.05
NIPAL3-204ENST00000374399 WAPLQ7Z5K2 1190 aa21.58■■□□□ 1.04
NIPAL3-204ENST00000374399 BCANQ96GW7 911 aa21.58■■□□□ 1.04
NIPAL3-204ENST00000374399 SLC26A8Q96RN1 970 aa21.58■■□□□ 1.04
NIPAL3-204ENST00000374399 DIP2AQ14689 1571 aa21.57■■□□□ 1.04
NIPAL3-204ENST00000374399 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
NIPAL3-204ENST00000374399 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
NIPAL3-204ENST00000374399 SIRT1Q96EB6 747 aa21.56■■□□□ 1.04
NIPAL3-204ENST00000374399 POGKQ9P215 609 aa21.56■■□□□ 1.04
NIPAL3-204ENST00000374399 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
NIPAL3-204ENST00000374399 FAM135BQ49AJ0 1406 aa21.56■■□□□ 1.04
NIPAL3-204ENST00000374399 EVC2Q86UK5 1308 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms