RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 ANKRD45Q5TZF3 282 aa13.6□□□□□ -0.23
CSMD2-204ENST00000373380 ANKRD30BQ9BXX2 1392 aa13.6□□□□□ -0.23
CSMD2-204ENST00000373380 ABCC5O15440 1437 aa13.6□□□□□ -0.23
CSMD2-204ENST00000373380 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
CSMD2-204ENST00000373380 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
CSMD2-204ENST00000373380 PTPRGP23470 1445 aa13.6□□□□□ -0.23
CSMD2-204ENST00000373380 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
CSMD2-204ENST00000373380 ANKRD50Q9ULJ7 1429 aa13.59□□□□□ -0.23
CSMD2-204ENST00000373380 PRKCSHP14314 528 aaPredicted RBP13.59□□□□□ -0.23
CSMD2-204ENST00000373380 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
CSMD2-204ENST00000373380 GRIN2AQ12879 1464 aa13.58□□□□□ -0.24
CSMD2-204ENST00000373380 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
CSMD2-204ENST00000373380 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
CSMD2-204ENST00000373380 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
CSMD2-204ENST00000373380 KIF21AQ7Z4S6 1674 aa13.57□□□□□ -0.24
CSMD2-204ENST00000373380 HMMRO75330 724 aa13.57□□□□□ -0.24
CSMD2-204ENST00000373380 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
CSMD2-204ENST00000373380 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
CSMD2-204ENST00000373380 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
CSMD2-204ENST00000373380 CHAF1AQ13111 956 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-204ENST00000373380 NBPF1Q3BBV0 1214 aa13.56□□□□□ -0.24
CSMD2-204ENST00000373380 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
CSMD2-204ENST00000373380 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
CSMD2-204ENST00000373380 WDR62O43379 1518 aa13.55□□□□□ -0.24
CSMD2-204ENST00000373380 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
CSMD2-204ENST00000373380 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
CSMD2-204ENST00000373380 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
CSMD2-204ENST00000373380 NGDNQ8NEJ9 315 aaKnown RBP13.54□□□□□ -0.24
CSMD2-204ENST00000373380 PTMSP20962 102 aa13.54□□□□□ -0.24
CSMD2-204ENST00000373380 MAGI1Q96QZ7 1491 aaPredicted RBP13.54□□□□□ -0.24
CSMD2-204ENST00000373380 NRDCO43847 1150 aa13.53□□□□□ -0.24
CSMD2-204ENST00000373380 ZNF330Q9Y3S2 320 aaPredicted RBP13.53□□□□□ -0.24
CSMD2-204ENST00000373380 KIAA2012Q0VF49 1180 aa13.53□□□□□ -0.24
CSMD2-204ENST00000373380 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
CSMD2-204ENST00000373380 AMPHP49418 695 aa13.53□□□□□ -0.24
CSMD2-204ENST00000373380 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
CSMD2-204ENST00000373380 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
CSMD2-204ENST00000373380 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
CSMD2-204ENST00000373380 TARBP1Q13395 1621 aaKnown RBP13.53□□□□□ -0.24
CSMD2-204ENST00000373380 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
CSMD2-204ENST00000373380 SYNJ2O15056 1496 aa13.52□□□□□ -0.24
CSMD2-204ENST00000373380 GOLGA6L6A8MZA4 724 aa13.52□□□□□ -0.24
CSMD2-204ENST00000373380 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
CSMD2-204ENST00000373380 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
CSMD2-204ENST00000373380 PNISRQ8TF01 805 aaKnown RBP13.52□□□□□ -0.25
CSMD2-204ENST00000373380 RIPK4P57078 832 aa13.52□□□□□ -0.25
CSMD2-204ENST00000373380 NFKBIBQ15653 356 aa13.52□□□□□ -0.25
CSMD2-204ENST00000373380 NCOA1Q15788 1441 aa13.51□□□□□ -0.25
CSMD2-204ENST00000373380 NUP153P49790 1475 aaKnown RBP13.51□□□□□ -0.25
CSMD2-204ENST00000373380 ST18O60284 1047 aa13.51□□□□□ -0.25
CSMD2-204ENST00000373380 PLB1Q6P1J6 1458 aa13.51□□□□□ -0.25
CSMD2-204ENST00000373380 BRD4O60885 1362 aaPredicted RBP13.51□□□□□ -0.25
CSMD2-204ENST00000373380 MAGI3Q5TCQ9 1506 aa13.51□□□□□ -0.25
CSMD2-204ENST00000373380 C11orf95C9JLR9 678 aaPredicted RBP13.51□□□□□ -0.25
CSMD2-204ENST00000373380 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
CSMD2-204ENST00000373380 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
CSMD2-204ENST00000373380 PBRM1Q86U86 1689 aa13.5□□□□□ -0.25
CSMD2-204ENST00000373380 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
CSMD2-204ENST00000373380 TNNT3P45378 269 aaPredicted RBP13.5□□□□□ -0.25
CSMD2-204ENST00000373380 TMEM132EQ6IEE7 984 aa13.5□□□□□ -0.25
CSMD2-204ENST00000373380 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
CSMD2-204ENST00000373380 RILPL2Q969X0 211 aa13.5□□□□□ -0.25
CSMD2-204ENST00000373380 DDX19BQ9UMR2 479 aa13.5□□□□□ -0.25
CSMD2-204ENST00000373380 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
CSMD2-204ENST00000373380 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
CSMD2-204ENST00000373380 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
CSMD2-204ENST00000373380 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
CSMD2-204ENST00000373380 GGNBP2Q9H3C7 697 aa13.49□□□□□ -0.25
CSMD2-204ENST00000373380 NPHP1O15259 732 aa13.48□□□□□ -0.25
CSMD2-204ENST00000373380 DIAPH1O60610 1272 aaKnown RBP13.48□□□□□ -0.25
CSMD2-204ENST00000373380 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
CSMD2-204ENST00000373380 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
CSMD2-204ENST00000373380 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
CSMD2-204ENST00000373380 AFAP1Q8N556 730 aa13.48□□□□□ -0.25
CSMD2-204ENST00000373380 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
CSMD2-204ENST00000373380 MTHFSP49914 203 aa13.47□□□□□ -0.25
CSMD2-204ENST00000373380 COG3Q96JB2 828 aa13.47□□□□□ -0.25
CSMD2-204ENST00000373380 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
CSMD2-204ENST00000373380 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
CSMD2-204ENST00000373380 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
CSMD2-204ENST00000373380 PPP2R1AP30153 589 aa13.46□□□□□ -0.25
CSMD2-204ENST00000373380 HMOX1P09601 288 aa13.46□□□□□ -0.26
CSMD2-204ENST00000373380 GNL2Q13823 731 aaKnown RBP13.46□□□□□ -0.26
CSMD2-204ENST00000373380 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
CSMD2-204ENST00000373380 DISP1Q96F81 1524 aa13.45□□□□□ -0.26
CSMD2-204ENST00000373380 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
CSMD2-204ENST00000373380 BCAR3O75815 825 aa13.44□□□□□ -0.26
CSMD2-204ENST00000373380 GCC2Q8IWJ2 1684 aa13.44□□□□□ -0.26
CSMD2-204ENST00000373380 A0A0U1RQG5 324 aaPredicted RBP13.44□□□□□ -0.26
CSMD2-204ENST00000373380 C22orf23Q9BZE7 217 aa13.44□□□□□ -0.26
CSMD2-204ENST00000373380 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
CSMD2-204ENST00000373380 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
CSMD2-204ENST00000373380 GORABQ5T7V8 394 aa13.43□□□□□ -0.26
CSMD2-204ENST00000373380 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
CSMD2-204ENST00000373380 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
CSMD2-204ENST00000373380 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
CSMD2-204ENST00000373380 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
CSMD2-204ENST00000373380 HSP90B1P14625 803 aaKnown RBP13.42□□□□□ -0.26
CSMD2-204ENST00000373380 PKNOX2Q96KN3 472 aa13.42□□□□□ -0.26
CSMD2-204ENST00000373380 CCDC9Q9Y3X0 531 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms