RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 NEFLP07196 543 aa8.79□□□□□ -1
CHD6-202ENST00000373222 ZMYND15Q9H091 742 aa8.79□□□□□ -1
CHD6-202ENST00000373222 MRS2Q9HD23 443 aa8.79□□□□□ -1
CHD6-202ENST00000373222 NUP155O75694 1391 aa8.79□□□□□ -1
CHD6-202ENST00000373222 POLR1AO95602 1720 aaPredicted RBP8.79□□□□□ -1
CHD6-202ENST00000373222 C9orf84Q5VXU9 1444 aa8.79□□□□□ -1
CHD6-202ENST00000373222 KIAA1107Q9UPP5 1409 aa8.79□□□□□ -1
CHD6-202ENST00000373222 POTEFA5A3E0 1075 aa8.78□□□□□ -1
CHD6-202ENST00000373222 TMEM121BQ9BXQ6 578 aaPredicted RBP8.78□□□□□ -1
CHD6-202ENST00000373222 MBD5Q9P267 1494 aa8.78□□□□□ -1
CHD6-202ENST00000373222 CDC42BPBQ9Y5S2 1711 aa8.78□□□□□ -1
CHD6-202ENST00000373222 ERCC6L2Q5T890 1561 aa8.78□□□□□ -1
CHD6-202ENST00000373222 ADGRL2O95490 1459 aa8.78□□□□□ -1
CHD6-202ENST00000373222 CHD1O14646 1710 aa8.78□□□□□ -1
CHD6-202ENST00000373222 ANKRD30AQ9BXX3 1397 aa8.78□□□□□ -1
CHD6-202ENST00000373222 USP47Q96K76 1375 aa8.77□□□□□ -1.01
CHD6-202ENST00000373222 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
CHD6-202ENST00000373222 ZBTB7CA1YPR0 619 aa8.76□□□□□ -1.01
CHD6-202ENST00000373222 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
CHD6-202ENST00000373222 KDM5CP41229 1560 aa8.75□□□□□ -1.01
CHD6-202ENST00000373222 SAMD9LQ8IVG5 1584 aa8.75□□□□□ -1.01
CHD6-202ENST00000373222 NEUROD2Q15784 382 aa8.75□□□□□ -1.01
CHD6-202ENST00000373222 KIF15Q9NS87 1388 aa8.75□□□□□ -1.01
CHD6-202ENST00000373222 PTPRGP23470 1445 aa8.75□□□□□ -1.01
CHD6-202ENST00000373222 DHX29Q7Z478 1369 aaKnown RBP8.75□□□□□ -1.01
CHD6-202ENST00000373222 DCAF11Q8TEB1 546 aa8.74□□□□□ -1.01
CHD6-202ENST00000373222 TTC37Q6PGP7 1564 aa8.74□□□□□ -1.01
CHD6-202ENST00000373222 TSPY4P0CV99 314 aa8.73□□□□□ -1.01
CHD6-202ENST00000373222 TSPY10P0CW01 314 aa8.73□□□□□ -1.01
CHD6-202ENST00000373222 RGL3Q3MIN7 710 aa8.73□□□□□ -1.01
CHD6-202ENST00000373222 ST20-MTHFSA0A0A6YYL1 179 aa8.73□□□□□ -1.01
CHD6-202ENST00000373222 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
CHD6-202ENST00000373222 RBM19Q9Y4C8 960 aaKnown RBP8.73□□□□□ -1.01
CHD6-202ENST00000373222 SYCP2Q9BX26 1530 aa8.73□□□□□ -1.01
CHD6-202ENST00000373222 LMOD2Q6P5Q4 547 aa8.72□□□□□ -1.01
CHD6-202ENST00000373222 PREX2Q70Z35 1606 aa8.71□□□□□ -1.01
CHD6-202ENST00000373222 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
CHD6-202ENST00000373222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.024e-7■□□□□ 11.1
CHD6-202ENST00000373222 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
CHD6-202ENST00000373222 FAM135AQ9P2D6 1515 aa8.7□□□□□ -1.02
CHD6-202ENST00000373222 TIE1P35590 1138 aa8.7□□□□□ -1.02
CHD6-202ENST00000373222 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
CHD6-202ENST00000373222 SPOCK2Q92563 424 aa8.7□□□□□ -1.02
CHD6-202ENST00000373222 ARHGAP5Q13017 1502 aa8.69□□□□□ -1.02
CHD6-202ENST00000373222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.69□□□□□ -1.02
CHD6-202ENST00000373222 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
CHD6-202ENST00000373222 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
CHD6-202ENST00000373222 RALGAPBQ86X10 1494 aa8.69□□□□□ -1.02
CHD6-202ENST00000373222 ZBED9Q6R2W3 1325 aa8.68□□□□□ -1.02
CHD6-202ENST00000373222 ARHGEF5Q12774 1597 aa8.68□□□□□ -1.02
CHD6-202ENST00000373222 SEC24BO95487 1268 aa8.68□□□□□ -1.02
CHD6-202ENST00000373222 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
CHD6-202ENST00000373222 PLA2R1Q13018 1463 aa8.68□□□□□ -1.02
CHD6-202ENST00000373222 ARHGEF12Q9NZN5 1544 aa8.68□□□□□ -1.02
CHD6-202ENST00000373222 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
CHD6-202ENST00000373222 PLEKHH2Q8IVE3 1493 aa8.67□□□□□ -1.02
CHD6-202ENST00000373222 KDM5DQ9BY66 1539 aa8.67□□□□□ -1.02
CHD6-202ENST00000373222 SNPHO15079 494 aa8.67□□□□□ -1.02
CHD6-202ENST00000373222 IER5LQ5T953 404 aa8.67□□□□□ -1.02
CHD6-202ENST00000373222 UHRF1BP1Q6BDS2 1440 aa8.67□□□□□ -1.02
CHD6-202ENST00000373222 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
CHD6-202ENST00000373222 ROCK2O75116 1388 aaKnown RBP8.67□□□□□ -1.02
CHD6-202ENST00000373222 MYO5CQ9NQX4 1742 aa8.66□□□□□ -1.02
CHD6-202ENST00000373222 MNX1P50219 401 aaPredicted RBP8.66□□□□□ -1.02
CHD6-202ENST00000373222 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.02
CHD6-202ENST00000373222 SHROOM2Q13796 1616 aa8.65□□□□□ -1.03
CHD6-202ENST00000373222 CCDC144AA2RUR9 1427 aa8.64□□□□□ -1.03
CHD6-202ENST00000373222 PNISRQ8TF01 805 aaKnown RBP8.64□□□□□ -1.03
CHD6-202ENST00000373222 A2MP01023 1474 aa8.64□□□□□ -1.03
CHD6-202ENST00000373222 E9PCH4 1651 aa8.63□□□□□ -1.03
CHD6-202ENST00000373222 PRAG1Q86YV5 1406 aa8.63□□□□□ -1.03
CHD6-202ENST00000373222 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
CHD6-202ENST00000373222 DISP3Q9P2K9 1392 aa8.63□□□□□ -1.03
CHD6-202ENST00000373222 ZCCHC11Q5TAX3 1644 aaKnown RBP8.63□□□□□ -1.03
CHD6-202ENST00000373222 CDK11BP21127 795 aaKnown RBP8.62□□□□□ -1.03
CHD6-202ENST00000373222 ABCC2Q92887 1545 aa8.62□□□□□ -1.03
CHD6-202ENST00000373222 UNC13BO14795 1591 aa8.62□□□□□ -1.03
CHD6-202ENST00000373222 TRAPPC8Q9Y2L5 1435 aa8.62□□□□□ -1.03
CHD6-202ENST00000373222 AFAP1Q8N556 730 aa8.62□□□□□ -1.03
CHD6-202ENST00000373222 ANP32EQ9BTT0 268 aa8.62□□□□□ -1.03
CHD6-202ENST00000373222 CC2D1BQ5T0F9 858 aaKnown RBP8.61□□□□□ -1.03
CHD6-202ENST00000373222 PPP4R2Q9NY27 417 aa8.61□□□□□ -1.03
CHD6-202ENST00000373222 COLQQ9Y215 455 aaPredicted RBP8.61□□□□□ -1.03
CHD6-202ENST00000373222 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
CHD6-202ENST00000373222 CHMP4AQ9BY43 222 aa8.6□□□□□ -1.03
CHD6-202ENST00000373222 KIF12Q96FN5 646 aa8.6□□□□□ -1.03
CHD6-202ENST00000373222 IQGAP3Q86VI3 1631 aa8.6□□□□□ -1.03
CHD6-202ENST00000373222 NKX1-1Q15270 411 aaPredicted RBP8.59□□□□□ -1.03
CHD6-202ENST00000373222 TESK2Q96S53 571 aa8.59□□□□□ -1.03
CHD6-202ENST00000373222 NUDCQ9Y266 331 aa8.59□□□□□ -1.03
CHD6-202ENST00000373222 SMG6Q86US8 1419 aaKnown RBP8.59□□□□□ -1.03
CHD6-202ENST00000373222 PLXNC1O60486 1568 aa8.59□□□□□ -1.03
CHD6-202ENST00000373222 MAST1Q9Y2H9 1570 aa8.59□□□□□ -1.03
CHD6-202ENST00000373222 PER1O15534 1290 aaPredicted RBP8.58□□□□□ -1.04
CHD6-202ENST00000373222 HS6ST3Q8IZP7 471 aa8.58□□□□□ -1.04
CHD6-202ENST00000373222 KCTD17Q8N5Z5 321 aa8.58□□□□□ -1.04
CHD6-202ENST00000373222 CDCA7LQ96GN5 454 aa8.58□□□□□ -1.04
CHD6-202ENST00000373222 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
CHD6-202ENST00000373222 ARID4BQ4LE39 1312 aaPredicted RBP8.58□□□□□ -1.04
CHD6-202ENST00000373222 MYBBP1AQ9BQG0 1328 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms