RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 LMTK2Q8IWU2 1503 aa24.88■■□□□ 1.57
TRAPPC3-203ENST00000373163 ABCC5O15440 1437 aa24.87■■□□□ 1.57
TRAPPC3-203ENST00000373163 KANK4Q5T7N3 995 aaPredicted RBP24.87■■□□□ 1.57
TRAPPC3-203ENST00000373163 NOS1P29475 1434 aa24.86■■□□□ 1.57
TRAPPC3-203ENST00000373163 RXRBP28702 533 aa24.84■■□□□ 1.57
TRAPPC3-203ENST00000373163 SLC52A1Q9NWF4 448 aa24.84■■□□□ 1.57
TRAPPC3-203ENST00000373163 VPS8Q8N3P4 1428 aa24.83■■□□□ 1.57
TRAPPC3-203ENST00000373163 PLEKHG1Q9ULL1 1385 aa24.82■■□□□ 1.56
TRAPPC3-203ENST00000373163 NCOA3Q9Y6Q9 1424 aa24.81■■□□□ 1.56
TRAPPC3-203ENST00000373163 C14orf37Q86TY3 774 aa24.81■■□□□ 1.56
TRAPPC3-203ENST00000373163 CROCC2H7BZ55 1655 aa24.8■■□□□ 1.56
TRAPPC3-203ENST00000373163 ZFYVE9O95405 1425 aa24.79■■□□□ 1.56
TRAPPC3-203ENST00000373163 PPP1R15AO75807 674 aaPredicted RBP24.79■■□□□ 1.56
TRAPPC3-203ENST00000373163 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
TRAPPC3-203ENST00000373163 DAPK1P53355 1430 aa24.78■■□□□ 1.56
TRAPPC3-203ENST00000373163 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
TRAPPC3-203ENST00000373163 CDK12Q9NYV4 1490 aaPredicted RBP24.77■■□□□ 1.56
TRAPPC3-203ENST00000373163 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
TRAPPC3-203ENST00000373163 SHPRHQ149N8 1683 aa24.75■■□□□ 1.55
TRAPPC3-203ENST00000373163 ATF3P18847 181 aa24.75■■□□□ 1.55
TRAPPC3-203ENST00000373163 TBX22Q9Y458 520 aa24.75■■□□□ 1.55
TRAPPC3-203ENST00000373163 ANKRD30AQ9BXX3 1397 aa24.75■■□□□ 1.55
TRAPPC3-203ENST00000373163 RIMS2Q9UQ26 1411 aa24.75■■□□□ 1.55
TRAPPC3-203ENST00000373163 CHD2O14647 1828 aaKnown RBP24.75■■□□□ 1.55
TRAPPC3-203ENST00000373163 NUTM2BA6NNL0 878 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC3-203ENST00000373163 NUTM2EB1AL46 878 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC3-203ENST00000373163 NUTM2AQ8IVF1 878 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC3-203ENST00000373163 C19orf44Q9H6X5 657 aa24.74■■□□□ 1.55
TRAPPC3-203ENST00000373163 PTPN23Q9H3S7 1636 aa24.72■■□□□ 1.55
TRAPPC3-203ENST00000373163 CHIC2Q9UKJ5 165 aa24.72■■□□□ 1.55
TRAPPC3-203ENST00000373163 RPRD2Q5VT52 1461 aaKnown RBP24.7■■□□□ 1.55
TRAPPC3-203ENST00000373163 AFF2P51816 1311 aa24.7■■□□□ 1.54
TRAPPC3-203ENST00000373163 BRINP3Q76B58 766 aa24.69■■□□□ 1.54
TRAPPC3-203ENST00000373163 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.68■■□□□ 1.54
TRAPPC3-203ENST00000373163 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
TRAPPC3-203ENST00000373163 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.67■■□□□ 1.54
TRAPPC3-203ENST00000373163 ADAMTS13Q76LX8 1427 aa24.67■■□□□ 1.54
TRAPPC3-203ENST00000373163 PIK3R4Q99570 1358 aa24.65■■□□□ 1.54
TRAPPC3-203ENST00000373163 RGS12O14924 1447 aa24.64■■□□□ 1.54
TRAPPC3-203ENST00000373163 TMEM131LA2VDJ0 1609 aa24.64■■□□□ 1.53
TRAPPC3-203ENST00000373163 NUTM2DQ5VT03 806 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC3-203ENST00000373163 GCC2Q8IWJ2 1684 aa24.62■■□□□ 1.53
TRAPPC3-203ENST00000373163 CHGAP10645 457 aaKnown RBP24.62■■□□□ 1.53
TRAPPC3-203ENST00000373163 SETD5Q9C0A6 1442 aa24.61■■□□□ 1.53
TRAPPC3-203ENST00000373163 RBM6P78332 1123 aaKnown RBP24.6■■□□□ 1.53
TRAPPC3-203ENST00000373163 C8orf37Q96NL8 207 aa24.6■■□□□ 1.53
TRAPPC3-203ENST00000373163 ASXL1Q8IXJ9 1541 aa24.6■■□□□ 1.53
TRAPPC3-203ENST00000373163 MYO5BQ9ULV0 1848 aa24.59■■□□□ 1.53
TRAPPC3-203ENST00000373163 QTRT2Q9H974 415 aaKnown RBP24.59■■□□□ 1.53
TRAPPC3-203ENST00000373163 AMOTL2Q9Y2J4 779 aa24.59■■□□□ 1.53
TRAPPC3-203ENST00000373163 DCCP43146 1447 aa24.59■■□□□ 1.53
TRAPPC3-203ENST00000373163 ADGRL2O95490 1459 aa24.57■■□□□ 1.52
TRAPPC3-203ENST00000373163 PTPRUQ92729 1446 aa24.56■■□□□ 1.52
TRAPPC3-203ENST00000373163 ANKRD50Q9ULJ7 1429 aa24.56■■□□□ 1.52
TRAPPC3-203ENST00000373163 LRRC59Q96AG4 307 aaKnown RBP24.56■■□□□ 1.52
TRAPPC3-203ENST00000373163 TRPM2O94759 1503 aa24.56■■□□□ 1.52
TRAPPC3-203ENST00000373163 MST1RQ04912 1400 aa24.53■■□□□ 1.52
TRAPPC3-203ENST00000373163 APLP2Q06481 763 aa24.52■■□□□ 1.52
TRAPPC3-203ENST00000373163 PNPLA6Q8IY17 1366 aa24.52■■□□□ 1.52
TRAPPC3-203ENST00000373163 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
TRAPPC3-203ENST00000373163 NGLY1Q96IV0 654 aa24.5■■□□□ 1.51
TRAPPC3-203ENST00000373163 NHSL1Q5SYE7 1610 aa24.5■■□□□ 1.51
TRAPPC3-203ENST00000373163 SRCAPQ6ZRS2 3230 aa24.49■■□□□ 1.51
TRAPPC3-203ENST00000373163 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
TRAPPC3-203ENST00000373163 DDX17Q92841 729 aaKnown RBP24.48■■□□□ 1.51
TRAPPC3-203ENST00000373163 ADAMTS2O95450 1211 aa24.46■■□□□ 1.51
TRAPPC3-203ENST00000373163 FOXD1Q16676 465 aa24.46■■□□□ 1.51
TRAPPC3-203ENST00000373163 ZRANB1Q9UGI0 708 aa24.46■■□□□ 1.51
TRAPPC3-203ENST00000373163 UNC13BO14795 1591 aa24.45■■□□□ 1.5
TRAPPC3-203ENST00000373163 XRN1Q8IZH2 1706 aaKnown RBP24.43■■□□□ 1.5
TRAPPC3-203ENST00000373163 FAM50AQ14320 339 aaKnown RBP24.42■■□□□ 1.5
TRAPPC3-203ENST00000373163 USP21Q9UK80 565 aa24.4■■□□□ 1.5
TRAPPC3-203ENST00000373163 ADGRL3Q9HAR2 1447 aa24.4■■□□□ 1.5
TRAPPC3-203ENST00000373163 E9PCH4 1651 aa24.4■■□□□ 1.5
TRAPPC3-203ENST00000373163 TRPC5Q9UL62 973 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC3-203ENST00000373163 SETBP1Q9Y6X0 1596 aa24.38■■□□□ 1.49
TRAPPC3-203ENST00000373163 METP08581 1390 aa24.38■■□□□ 1.49
TRAPPC3-203ENST00000373163 NRXN3Q9Y4C0 1643 aa24.37■■□□□ 1.49
TRAPPC3-203ENST00000373163 C1orf167Q5SNV9 1468 aa24.33■■□□□ 1.49
TRAPPC3-203ENST00000373163 FNBP4Q8N3X1 1017 aaPredicted RBP24.33■■□□□ 1.49
TRAPPC3-203ENST00000373163 PTCH1Q13635 1447 aa24.32■■□□□ 1.48
TRAPPC3-203ENST00000373163 ATRNO75882 1429 aa24.31■■□□□ 1.48
TRAPPC3-203ENST00000373163 CCDC125Q86Z20 511 aa24.31■■□□□ 1.48
TRAPPC3-203ENST00000373163 IQGAP3Q86VI3 1631 aa24.31■■□□□ 1.48
TRAPPC3-203ENST00000373163 SOS2Q07890 1332 aaPredicted RBP24.31■■□□□ 1.48
TRAPPC3-203ENST00000373163 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
TRAPPC3-203ENST00000373163 NALCNQ8IZF0 1738 aa24.29■■□□□ 1.48
TRAPPC3-203ENST00000373163 NUP155O75694 1391 aa24.28■■□□□ 1.48
TRAPPC3-203ENST00000373163 LAMC1P11047 1609 aa24.27■■□□□ 1.48
TRAPPC3-203ENST00000373163 ORAI2Q96SN7 254 aa24.26■■□□□ 1.47
TRAPPC3-203ENST00000373163 ROCK1Q13464 1354 aa24.23■■□□□ 1.47
TRAPPC3-203ENST00000373163 BCL9LQ86UU0 1499 aa24.2■■□□□ 1.47
TRAPPC3-203ENST00000373163 MYOM2P54296 1465 aa24.19■■□□□ 1.46
TRAPPC3-203ENST00000373163 COL22A1Q8NFW1 1626 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC3-203ENST00000373163 GJD4Q96KN9 370 aaPredicted RBP24.18■■□□□ 1.46
TRAPPC3-203ENST00000373163 ROBO2Q9HCK4 1378 aa24.17■■□□□ 1.46
TRAPPC3-203ENST00000373163 EP400Q96L91 3159 aa24.16■■□□□ 1.46
TRAPPC3-203ENST00000373163 NEXMIFQ5QGS0 1516 aa24.16■■□□□ 1.46
TRAPPC3-203ENST00000373163 BLMP54132 1417 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC3-203ENST00000373163 NPHP3Q7Z494 1330 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms