RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CENPQQ7L2Z9 268 aaPredicted RBP19.33■□□□□ 0.68
COL9A2-202ENST00000372748 SPAG9O60271 1321 aaKnown RBP19.32■□□□□ 0.68
COL9A2-202ENST00000372748 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
COL9A2-202ENST00000372748 PLEKHH1Q9ULM0 1364 aa19.3■□□□□ 0.68
COL9A2-202ENST00000372748 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
COL9A2-202ENST00000372748 FRAT2O75474 233 aaPredicted RBP19.3■□□□□ 0.68
COL9A2-202ENST00000372748 DUSP27Q5VZP5 1158 aa19.3■□□□□ 0.68
COL9A2-202ENST00000372748 ZCCHC11Q5TAX3 1644 aaKnown RBP19.3■□□□□ 0.68
COL9A2-202ENST00000372748 ATP10AO60312 1499 aa19.29■□□□□ 0.68
COL9A2-202ENST00000372748 MAGI2Q86UL8 1455 aa19.29■□□□□ 0.68
COL9A2-202ENST00000372748 ZMYM4Q5VZL5 1548 aa19.29■□□□□ 0.68
COL9A2-202ENST00000372748 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
COL9A2-202ENST00000372748 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL9A2-202ENST00000372748 LAMC1P11047 1609 aa19.27■□□□□ 0.68
COL9A2-202ENST00000372748 KNSTRNQ9Y448 316 aa19.27■□□□□ 0.68
COL9A2-202ENST00000372748 ABCC1P33527 1531 aa19.27■□□□□ 0.67
COL9A2-202ENST00000372748 GOLGA2Q08379 1002 aa19.25■□□□□ 0.67
COL9A2-202ENST00000372748 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
COL9A2-202ENST00000372748 CCDC146Q8IYE0 955 aa19.23■□□□□ 0.67
COL9A2-202ENST00000372748 INSRP06213 1382 aa19.23■□□□□ 0.67
COL9A2-202ENST00000372748 KIF3BO15066 747 aa19.22■□□□□ 0.67
COL9A2-202ENST00000372748 WDR7Q9Y4E6 1490 aa19.21■□□□□ 0.67
COL9A2-202ENST00000372748 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
COL9A2-202ENST00000372748 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.67
COL9A2-202ENST00000372748 EIF5BO60841 1220 aaKnown RBP19.2■□□□□ 0.66
COL9A2-202ENST00000372748 RNF17Q9BXT8 1623 aaKnown RBP19.2■□□□□ 0.66
COL9A2-202ENST00000372748 SPINK5Q9NQ38 1064 aaPredicted RBP19.2■□□□□ 0.66
COL9A2-202ENST00000372748 BCAR3O75815 825 aa19.19■□□□□ 0.66
COL9A2-202ENST00000372748 AMER1Q5JTC6 1135 aaPredicted RBP19.19■□□□□ 0.66
COL9A2-202ENST00000372748 MADDQ8WXG6 1647 aa19.19■□□□□ 0.66
COL9A2-202ENST00000372748 ZNF521Q96K83 1311 aa19.19■□□□□ 0.66
COL9A2-202ENST00000372748 SLFN5Q08AF3 891 aa19.17■□□□□ 0.66
COL9A2-202ENST00000372748 UHRF1BP1LA0JNW5 1464 aa19.17■□□□□ 0.66
COL9A2-202ENST00000372748 CFAP70Q5T0N1 1121 aa19.17■□□□□ 0.66
COL9A2-202ENST00000372748 CLTCL1P53675 1640 aa19.17■□□□□ 0.66
COL9A2-202ENST00000372748 ZFYVE16Q7Z3T8 1539 aa19.17■□□□□ 0.66
COL9A2-202ENST00000372748 SCAF11Q99590 1463 aaKnown RBP19.16■□□□□ 0.66
COL9A2-202ENST00000372748 TRPM2O94759 1503 aa19.15■□□□□ 0.66
COL9A2-202ENST00000372748 SCAPERQ9BY12 1400 aa19.15■□□□□ 0.66
COL9A2-202ENST00000372748 APAF1O14727 1248 aa19.15■□□□□ 0.66
COL9A2-202ENST00000372748 IGHDP01880 384 aa19.15■□□□□ 0.66
COL9A2-202ENST00000372748 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
COL9A2-202ENST00000372748 CDCA8Q53HL2 280 aa19.15■□□□□ 0.66
COL9A2-202ENST00000372748 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
COL9A2-202ENST00000372748 PTPRTO14522 1441 aa19.14■□□□□ 0.65
COL9A2-202ENST00000372748 SPHKAPQ2M3C7 1700 aa19.14■□□□□ 0.65
COL9A2-202ENST00000372748 KANK1Q14678 1352 aa19.13■□□□□ 0.65
COL9A2-202ENST00000372748 SEC24BO95487 1268 aa19.13■□□□□ 0.65
COL9A2-202ENST00000372748 FANCAO15360 1455 aa19.12■□□□□ 0.65
COL9A2-202ENST00000372748 ADGRF5Q8IZF2 1346 aa19.12■□□□□ 0.65
COL9A2-202ENST00000372748 UGGT1Q9NYU2 1555 aa19.12■□□□□ 0.65
COL9A2-202ENST00000372748 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
COL9A2-202ENST00000372748 CEP152O94986 1710 aa19.11■□□□□ 0.65
COL9A2-202ENST00000372748 SLKQ9H2G2 1235 aaPredicted RBP19.11■□□□□ 0.65
COL9A2-202ENST00000372748 POGKQ9P215 609 aa19.11■□□□□ 0.65
COL9A2-202ENST00000372748 USP19O94966 1318 aa19.1■□□□□ 0.65
COL9A2-202ENST00000372748 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL9A2-202ENST00000372748 ATP7AQ04656 1500 aa19.1■□□□□ 0.65
COL9A2-202ENST00000372748 CHGAP10645 457 aaKnown RBP19.09■□□□□ 0.65
COL9A2-202ENST00000372748 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.64
COL9A2-202ENST00000372748 ASXL1Q8IXJ9 1541 aa19.08■□□□□ 0.64
COL9A2-202ENST00000372748 STAC3Q96MF2 364 aa19.07■□□□□ 0.64
COL9A2-202ENST00000372748 EIF3AQ14152 1382 aaKnown RBP19.07■□□□□ 0.64
COL9A2-202ENST00000372748 ADGRL1O94910 1474 aa19.07■□□□□ 0.64
COL9A2-202ENST00000372748 TET3O43151 1660 aa19.07■□□□□ 0.64
COL9A2-202ENST00000372748 PANK1Q8TE04 598 aa19.07■□□□□ 0.64
COL9A2-202ENST00000372748 COG6Q9Y2V7 657 aa19.07■□□□□ 0.64
COL9A2-202ENST00000372748 SYNMO15061 1565 aa19.06■□□□□ 0.64
COL9A2-202ENST00000372748 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
COL9A2-202ENST00000372748 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
COL9A2-202ENST00000372748 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
COL9A2-202ENST00000372748 CARD14Q9BXL6 1004 aa19.05■□□□□ 0.64
COL9A2-202ENST00000372748 ARXQ96QS3 562 aa19.04■□□□□ 0.64
COL9A2-202ENST00000372748 MYOM1P52179 1685 aa19.03■□□□□ 0.64
COL9A2-202ENST00000372748 ARAP3Q8WWN8 1544 aa19.03■□□□□ 0.64
COL9A2-202ENST00000372748 E9PSI1 815 aa19.03■□□□□ 0.64
COL9A2-202ENST00000372748 FAM43AQ8N2R8 423 aa19.02■□□□□ 0.64
COL9A2-202ENST00000372748 INO80Q9ULG1 1556 aaPredicted RBP19.02■□□□□ 0.64
COL9A2-202ENST00000372748 CLUAP1Q96AJ1 413 aa19.02■□□□□ 0.63
COL9A2-202ENST00000372748 PIK3C2GO75747 1445 aa19.01■□□□□ 0.63
COL9A2-202ENST00000372748 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
COL9A2-202ENST00000372748 NEUROD2Q15784 382 aa19■□□□□ 0.63
COL9A2-202ENST00000372748 ERVK-7P63135 1459 aa19■□□□□ 0.63
COL9A2-202ENST00000372748 VWDEQ8N2E2 1590 aa19■□□□□ 0.63
COL9A2-202ENST00000372748 ABCA9Q8IUA7 1624 aa19■□□□□ 0.63
COL9A2-202ENST00000372748 TRAK1Q9UPV9 953 aa19■□□□□ 0.63
COL9A2-202ENST00000372748 BECN1Q14457 450 aa18.99■□□□□ 0.63
COL9A2-202ENST00000372748 KDM5AP29375 1690 aaKnown RBP18.99■□□□□ 0.63
COL9A2-202ENST00000372748 CGNL1Q0VF96 1302 aa18.99■□□□□ 0.63
COL9A2-202ENST00000372748 CENPJQ9HC77 1338 aaPredicted RBP18.99■□□□□ 0.63
COL9A2-202ENST00000372748 CFAP65Q6ZU64 1925 aaKnown RBP18.99■□□□□ 0.63
COL9A2-202ENST00000372748 GGT6Q6P531 493 aa18.99■□□□□ 0.63
COL9A2-202ENST00000372748 ABCA6Q8N139 1617 aa18.98■□□□□ 0.63
COL9A2-202ENST00000372748 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
COL9A2-202ENST00000372748 MROH1Q8NDA8 1641 aa18.98■□□□□ 0.63
COL9A2-202ENST00000372748 MAP3K4Q9Y6R4 1608 aa18.98■□□□□ 0.63
COL9A2-202ENST00000372748 MAPK8IP3Q9UPT6 1336 aa18.97■□□□□ 0.63
COL9A2-202ENST00000372748 TMEM132EQ6IEE7 984 aa18.97■□□□□ 0.63
COL9A2-202ENST00000372748 SPRYD3Q8NCJ5 442 aa18.97■□□□□ 0.63
COL9A2-202ENST00000372748 PDE3AQ14432 1141 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms