RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 MYT1LQ9UL68 1186 aa24.28■■□□□ 1.48
CD40-201ENST00000372276 MYOM2P54296 1465 aa24.28■■□□□ 1.48
CD40-201ENST00000372276 CD109Q6YHK3 1445 aa24.28■■□□□ 1.48
CD40-201ENST00000372276 MROH1Q8NDA8 1641 aa24.26■■□□□ 1.47
CD40-201ENST00000372276 EFCAB6Q5THR3 1501 aa24.26■■□□□ 1.47
CD40-201ENST00000372276 KIDINS220Q9ULH0 1771 aa24.26■■□□□ 1.47
CD40-201ENST00000372276 KIF1BO60333 1816 aa24.25■■□□□ 1.47
CD40-201ENST00000372276 PPRC1Q5VV67 1664 aaKnown RBP24.24■■□□□ 1.47
CD40-201ENST00000372276 MLH3Q9UHC1 1453 aa24.24■■□□□ 1.47
CD40-201ENST00000372276 TSPOAP1O95153 1857 aa24.24■■□□□ 1.47
CD40-201ENST00000372276 PANK3Q9H999 370 aa24.24■■□□□ 1.47
CD40-201ENST00000372276 SYNMO15061 1565 aa24.22■■□□□ 1.47
CD40-201ENST00000372276 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
CD40-201ENST00000372276 IRX6P78412 446 aaPredicted RBP24.21■■□□□ 1.47
CD40-201ENST00000372276 RBM19Q9Y4C8 960 aaKnown RBP24.21■■□□□ 1.47
CD40-201ENST00000372276 NPC1L1Q9UHC9 1359 aa24.2■■□□□ 1.46
CD40-201ENST00000372276 POGZQ7Z3K3 1410 aa24.18■■□□□ 1.46
CD40-201ENST00000372276 KNSTRNQ9Y448 316 aa24.17■■□□□ 1.46
CD40-201ENST00000372276 NEO1Q92859 1461 aa24.17■■□□□ 1.46
CD40-201ENST00000372276 IFT172Q9UG01 1749 aa24.15■■□□□ 1.46
CD40-201ENST00000372276 HECW2Q9P2P5 1572 aa24.14■■□□□ 1.46
CD40-201ENST00000372276 NRXN1Q9ULB1 1477 aa24.14■■□□□ 1.45
CD40-201ENST00000372276 BLMP54132 1417 aaPredicted RBP24.14■■□□□ 1.45
CD40-201ENST00000372276 KDM5AP29375 1690 aaKnown RBP24.12■■□□□ 1.45
CD40-201ENST00000372276 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
CD40-201ENST00000372276 SBNO2Q9Y2G9 1366 aa24.11■■□□□ 1.45
CD40-201ENST00000372276 SETBP1Q9Y6X0 1596 aa24.1■■□□□ 1.45
CD40-201ENST00000372276 CC2D1BQ5T0F9 858 aaKnown RBP24.1■■□□□ 1.45
CD40-201ENST00000372276 ASXL1Q8IXJ9 1541 aa24.09■■□□□ 1.45
CD40-201ENST00000372276 ADGRB3O60242 1522 aa24.09■■□□□ 1.45
CD40-201ENST00000372276 ABCA6Q8N139 1617 aa24.08■■□□□ 1.44
CD40-201ENST00000372276 MYO3AQ8NEV4 1616 aa24.07■■□□□ 1.44
CD40-201ENST00000372276 FANCIQ9NVI1 1328 aa24.06■■□□□ 1.44
CD40-201ENST00000372276 PIK3C2GO75747 1445 aa24.06■■□□□ 1.44
CD40-201ENST00000372276 AMER1Q5JTC6 1135 aaPredicted RBP24.04■■□□□ 1.44
CD40-201ENST00000372276 B4GALNT3Q6L9W6 998 aa24.02■■□□□ 1.44
CD40-201ENST00000372276 RCAN3Q9UKA8 241 aa24.02■■□□□ 1.44
CD40-201ENST00000372276 FRMPD1Q5SYB0 1578 aa24.02■■□□□ 1.44
CD40-201ENST00000372276 PPP2R1AP30153 589 aa24.01■■□□□ 1.43
CD40-201ENST00000372276 MYOM1P52179 1685 aa24.01■■□□□ 1.43
CD40-201ENST00000372276 CCDC136Q96JN2 1154 aa24.01■■□□□ 1.43
CD40-201ENST00000372276 NPATQ14207 1427 aa24■■□□□ 1.43
CD40-201ENST00000372276 ADGRF5Q8IZF2 1346 aa24■■□□□ 1.43
CD40-201ENST00000372276 CFAP70Q5T0N1 1121 aa24■■□□□ 1.43
CD40-201ENST00000372276 MROH2AA6NES4 1674 aa24■■□□□ 1.43
CD40-201ENST00000372276 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
CD40-201ENST00000372276 WDR43Q15061 677 aaKnown RBP eCLIP23.99■■□□□ 1.43
CD40-201ENST00000372276 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
CD40-201ENST00000372276 ABCC3O15438 1527 aa23.99■■□□□ 1.43
CD40-201ENST00000372276 PPLO60437 1756 aa23.99■■□□□ 1.43
CD40-201ENST00000372276 NGEFQ8N5V2 710 aa23.99■■□□□ 1.43
CD40-201ENST00000372276 ARHGAP31Q2M1Z3 1444 aa23.97■■□□□ 1.43
CD40-201ENST00000372276 ZC3H13Q5T200 1668 aaKnown RBP23.97■■□□□ 1.43
CD40-201ENST00000372276 PUS7Q96PZ0 661 aaKnown RBP23.97■■□□□ 1.43
CD40-201ENST00000372276 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
CD40-201ENST00000372276 ANP32EQ9BTT0 268 aa23.96■■□□□ 1.43
CD40-201ENST00000372276 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
CD40-201ENST00000372276 NOS1P29475 1434 aa23.95■■□□□ 1.43
CD40-201ENST00000372276 CAMSAP1Q5T5Y3 1602 aa23.94■■□□□ 1.42
CD40-201ENST00000372276 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
CD40-201ENST00000372276 GGT6Q6P531 493 aa23.93■■□□□ 1.42
CD40-201ENST00000372276 DIP2CQ9Y2E4 1556 aa23.9■■□□□ 1.42
CD40-201ENST00000372276 VGFO15240 615 aaPredicted RBP23.9■■□□□ 1.42
CD40-201ENST00000372276 ADAMTS8Q9UP79 889 aa23.9■■□□□ 1.42
CD40-201ENST00000372276 PIK3C2BO00750 1634 aa23.9■■□□□ 1.42
CD40-201ENST00000372276 RAPGEF3O95398 923 aa23.88■■□□□ 1.41
CD40-201ENST00000372276 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
CD40-201ENST00000372276 RICTORQ6R327 1708 aa23.88■■□□□ 1.41
CD40-201ENST00000372276 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
CD40-201ENST00000372276 SLC52A1Q9NWF4 448 aa23.87■■□□□ 1.41
CD40-201ENST00000372276 ADGRB1O14514 1584 aa23.86■■□□□ 1.41
CD40-201ENST00000372276 SALL2Q9Y467 1007 aaPredicted RBP23.83■■□□□ 1.41
CD40-201ENST00000372276 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
CD40-201ENST00000372276 GOLGA2Q08379 1002 aa23.81■■□□□ 1.4
CD40-201ENST00000372276 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
CD40-201ENST00000372276 CFAP65Q6ZU64 1925 aaKnown RBP23.81■■□□□ 1.4
CD40-201ENST00000372276 POLR3AO14802 1390 aaPredicted RBP23.81■■□□□ 1.4
CD40-201ENST00000372276 ZNF521Q96K83 1311 aa23.81■■□□□ 1.4
CD40-201ENST00000372276 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.8■■□□□ 1.4
CD40-201ENST00000372276 CDCA7LQ96GN5 454 aa23.8■■□□□ 1.4
CD40-201ENST00000372276 PPP6R1Q9UPN7 881 aa23.8■■□□□ 1.4
CD40-201ENST00000372276 NEXMIFQ5QGS0 1516 aa23.78■■□□□ 1.4
CD40-201ENST00000372276 EVC2Q86UK5 1308 aa23.77■■□□□ 1.4
CD40-201ENST00000372276 CARD14Q9BXL6 1004 aa23.77■■□□□ 1.4
CD40-201ENST00000372276 SIGLEC1Q9BZZ2 1709 aa23.77■■□□□ 1.4
CD40-201ENST00000372276 NINLQ9Y2I6 1382 aa23.76■■□□□ 1.39
CD40-201ENST00000372276 TCERG1O14776 1098 aaKnown RBP23.76■■□□□ 1.39
CD40-201ENST00000372276 NSD2O96028 1365 aa23.75■■□□□ 1.39
CD40-201ENST00000372276 EXOC6Q8TAG9 804 aa23.75■■□□□ 1.39
CD40-201ENST00000372276 TRAK1Q9UPV9 953 aa23.75■■□□□ 1.39
CD40-201ENST00000372276 SENP3-EIF4A1A0A087X0R7 540 aa23.74■■□□□ 1.39
CD40-201ENST00000372276 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
CD40-201ENST00000372276 PLEKHH1Q9ULM0 1364 aa23.73■■□□□ 1.39
CD40-201ENST00000372276 REREQ9P2R6 1566 aa23.72■■□□□ 1.39
CD40-201ENST00000372276 MS4A1P11836 297 aa23.71■■□□□ 1.39
CD40-201ENST00000372276 SLFN5Q08AF3 891 aa23.71■■□□□ 1.39
CD40-201ENST00000372276 NCBP3Q53F19 620 aaKnown RBP23.71■■□□□ 1.39
CD40-201ENST00000372276 TRMT2AQ8IZ69 625 aaKnown RBP23.71■■□□□ 1.39
CD40-201ENST00000372276 CGNL1Q0VF96 1302 aa23.71■■□□□ 1.39
CD40-201ENST00000372276 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms