RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ABCC10Q5T3U5 1492 aa11.78□□□□□ -0.52
ATG4A-203ENST00000372232 ADGRL2O95490 1459 aa11.77□□□□□ -0.52
ATG4A-203ENST00000372232 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.52
ATG4A-203ENST00000372232 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
ATG4A-203ENST00000372232 HSP90AA2PQ14568 343 aaPredicted RBP11.77□□□□□ -0.53
ATG4A-203ENST00000372232 ERCC6L2Q5T890 1561 aa11.76□□□□□ -0.53
ATG4A-203ENST00000372232 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
ATG4A-203ENST00000372232 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
ATG4A-203ENST00000372232 AK7Q96M32 723 aa11.76□□□□□ -0.53
ATG4A-203ENST00000372232 ANKRD30AQ9BXX3 1397 aa11.75□□□□□ -0.53
ATG4A-203ENST00000372232 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
ATG4A-203ENST00000372232 PPP1R37O75864 691 aa11.75□□□□□ -0.53
ATG4A-203ENST00000372232 PZPP20742 1482 aa11.74□□□□□ -0.53
ATG4A-203ENST00000372232 CDC42BPAQ5VT25 1732 aa11.73□□□□□ -0.53
ATG4A-203ENST00000372232 MFRPQ9BY79 579 aa11.73□□□□□ -0.53
ATG4A-203ENST00000372232 ADGBQ8N7X0 1667 aa11.73□□□□□ -0.53
ATG4A-203ENST00000372232 CROCC2H7BZ55 1655 aa11.73□□□□□ -0.53
ATG4A-203ENST00000372232 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
ATG4A-203ENST00000372232 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
ATG4A-203ENST00000372232 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
ATG4A-203ENST00000372232 SHANK2Q9UPX8 1470 aa11.72□□□□□ -0.53
ATG4A-203ENST00000372232 ANP32CO43423 234 aa11.71□□□□□ -0.53
ATG4A-203ENST00000372232 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
ATG4A-203ENST00000372232 B4GALNT3Q6L9W6 998 aa11.71□□□□□ -0.53
ATG4A-203ENST00000372232 ANKRD50Q9ULJ7 1429 aa11.71□□□□□ -0.53
ATG4A-203ENST00000372232 TEX14Q8IWB6 1497 aa11.71□□□□□ -0.54
ATG4A-203ENST00000372232 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.54
ATG4A-203ENST00000372232 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
ATG4A-203ENST00000372232 FAM117AQ9C073 453 aa11.7□□□□□ -0.54
ATG4A-203ENST00000372232 TSPY4P0CV99 314 aa11.7□□□□□ -0.54
ATG4A-203ENST00000372232 TSPY10P0CW01 314 aa11.7□□□□□ -0.54
ATG4A-203ENST00000372232 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
ATG4A-203ENST00000372232 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
ATG4A-203ENST00000372232 CYB5RLQ6IPT4 315 aa11.69□□□□□ -0.54
ATG4A-203ENST00000372232 LAS1LQ9Y4W2 734 aaKnown RBP11.69□□□□□ -0.54
ATG4A-203ENST00000372232 PDE4DQ08499 809 aa11.69□□□□□ -0.54
ATG4A-203ENST00000372232 NBPF8Q3BBV2 869 aa11.69□□□□□ -0.54
ATG4A-203ENST00000372232 MBD5Q9P267 1494 aa11.68□□□□□ -0.54
ATG4A-203ENST00000372232 HSP90AA1P07900 732 aaKnown RBP11.68□□□□□ -0.54
ATG4A-203ENST00000372232 DSG3P32926 999 aa11.68□□□□□ -0.54
ATG4A-203ENST00000372232 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
ATG4A-203ENST00000372232 FRAT1Q92837 279 aaPredicted RBP11.68□□□□□ -0.54
ATG4A-203ENST00000372232 TRIM66O15016 1216 aa11.67□□□□□ -0.54
ATG4A-203ENST00000372232 ARHGEF5Q12774 1597 aa11.67□□□□□ -0.54
ATG4A-203ENST00000372232 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
ATG4A-203ENST00000372232 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
ATG4A-203ENST00000372232 PRDM4Q9UKN5 801 aa11.66□□□□□ -0.54
ATG4A-203ENST00000372232 NUP155O75694 1391 aa11.65□□□□□ -0.54
ATG4A-203ENST00000372232 KIF15Q9NS87 1388 aa11.65□□□□□ -0.54
ATG4A-203ENST00000372232 CENPJQ9HC77 1338 aaPredicted RBP11.65□□□□□ -0.54
ATG4A-203ENST00000372232 ABCC2Q92887 1545 aa11.65□□□□□ -0.54
ATG4A-203ENST00000372232 CALD1Q05682 793 aaKnown RBP11.65□□□□□ -0.54
ATG4A-203ENST00000372232 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
ATG4A-203ENST00000372232 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
ATG4A-203ENST00000372232 CLUAP1Q96AJ1 413 aa11.64□□□□□ -0.55
ATG4A-203ENST00000372232 CCDC141Q6ZP82 1450 aa11.64□□□□□ -0.55
ATG4A-203ENST00000372232 SAMD9LQ8IVG5 1584 aa11.64□□□□□ -0.55
ATG4A-203ENST00000372232 PREX2Q70Z35 1606 aa11.64□□□□□ -0.55
ATG4A-203ENST00000372232 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
ATG4A-203ENST00000372232 MLLT3P42568 568 aaPredicted RBP11.63□□□□□ -0.55
ATG4A-203ENST00000372232 CDC42BPBQ9Y5S2 1711 aa11.63□□□□□ -0.55
ATG4A-203ENST00000372232 RRAGDQ9NQL2 400 aaPredicted RBP11.63□□□□□ -0.55
ATG4A-203ENST00000372232 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
ATG4A-203ENST00000372232 SPATA31E1Q6ZUB1 1445 aa11.62□□□□□ -0.55
ATG4A-203ENST00000372232 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
ATG4A-203ENST00000372232 DCAF11Q8TEB1 546 aa11.62□□□□□ -0.55
ATG4A-203ENST00000372232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.62□□□□□ -0.55
ATG4A-203ENST00000372232 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
ATG4A-203ENST00000372232 KCTD17Q8N5Z5 321 aa11.61□□□□□ -0.55
ATG4A-203ENST00000372232 TTC37Q6PGP7 1564 aa11.61□□□□□ -0.55
ATG4A-203ENST00000372232 CCDC7Q96M83 1385 aa11.6□□□□□ -0.55
ATG4A-203ENST00000372232 PLEKHG3A1L390 1219 aa11.6□□□□□ -0.55
ATG4A-203ENST00000372232 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
ATG4A-203ENST00000372232 NFKBIBQ15653 356 aa11.59□□□□□ -0.55
ATG4A-203ENST00000372232 CNTLNQ9NXG0 1405 aa11.59□□□□□ -0.55
ATG4A-203ENST00000372232 SYCP2Q9BX26 1530 aa11.59□□□□□ -0.55
ATG4A-203ENST00000372232 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
ATG4A-203ENST00000372232 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-203ENST00000372232 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
ATG4A-203ENST00000372232 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
ATG4A-203ENST00000372232 MAST1Q9Y2H9 1570 aa11.56□□□□□ -0.56
ATG4A-203ENST00000372232 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
ATG4A-203ENST00000372232 UHRF1BP1Q6BDS2 1440 aa11.56□□□□□ -0.56
ATG4A-203ENST00000372232 PLCH2O75038 1416 aa11.56□□□□□ -0.56
ATG4A-203ENST00000372232 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
ATG4A-203ENST00000372232 ZNF326Q5BKZ1 582 aaKnown RBP11.55□□□□□ -0.56
ATG4A-203ENST00000372232 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
ATG4A-203ENST00000372232 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
ATG4A-203ENST00000372232 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
ATG4A-203ENST00000372232 ONECUT3O60422 494 aaPredicted RBP11.55□□□□□ -0.56
ATG4A-203ENST00000372232 ARHGEF12Q9NZN5 1544 aa11.54□□□□□ -0.56
ATG4A-203ENST00000372232 ZCCHC11Q5TAX3 1644 aaKnown RBP11.54□□□□□ -0.56
ATG4A-203ENST00000372232 MYO5CQ9NQX4 1742 aa11.54□□□□□ -0.56
ATG4A-203ENST00000372232 RAD21O60216 631 aa11.54□□□□□ -0.56
ATG4A-203ENST00000372232 CLCN1P35523 988 aa11.54□□□□□ -0.56
ATG4A-203ENST00000372232 PDCL3Q9H2J4 239 aa11.54□□□□□ -0.56
ATG4A-203ENST00000372232 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
ATG4A-203ENST00000372232 USP47Q96K76 1375 aa11.54□□□□□ -0.56
ATG4A-203ENST00000372232 EFCAB2Q5VUJ9 269 aa11.53□□□□□ -0.56
ATG4A-203ENST00000372232 AEBP1Q8IUX7 1158 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms