RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 STAG3Q9UJ98 1225 aa18.09■□□□□ 0.49
LDB3-203ENST00000372056 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
LDB3-203ENST00000372056 LAMC1P11047 1609 aa18.09■□□□□ 0.49
LDB3-203ENST00000372056 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
LDB3-203ENST00000372056 UGGT1Q9NYU2 1555 aa18.09■□□□□ 0.49
LDB3-203ENST00000372056 GPRASP1Q5JY77 1395 aa18.08■□□□□ 0.49
LDB3-203ENST00000372056 C11orf95C9JLR9 678 aaPredicted RBP18.08■□□□□ 0.49
LDB3-203ENST00000372056 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.49
LDB3-203ENST00000372056 IFT172Q9UG01 1749 aa18.08■□□□□ 0.48
LDB3-203ENST00000372056 ROCK2O75116 1388 aaKnown RBP18.07■□□□□ 0.48
LDB3-203ENST00000372056 TMEM131LA2VDJ0 1609 aa18.07■□□□□ 0.48
LDB3-203ENST00000372056 TRPM1Q7Z4N2 1603 aa18.07■□□□□ 0.48
LDB3-203ENST00000372056 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.07■□□□□ 0.48
LDB3-203ENST00000372056 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
LDB3-203ENST00000372056 POLR1AO95602 1720 aaPredicted RBP18.06■□□□□ 0.48
LDB3-203ENST00000372056 NRXN1Q9ULB1 1477 aa18.06■□□□□ 0.48
LDB3-203ENST00000372056 ANP32CO43423 234 aa18.06■□□□□ 0.48
LDB3-203ENST00000372056 CARD11Q9BXL7 1154 aa18.06■□□□□ 0.48
LDB3-203ENST00000372056 MADDQ8WXG6 1647 aa18.05■□□□□ 0.48
LDB3-203ENST00000372056 PPLO60437 1756 aa18.05■□□□□ 0.48
LDB3-203ENST00000372056 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
LDB3-203ENST00000372056 C3P01024 1663 aa18.04■□□□□ 0.48
LDB3-203ENST00000372056 KIF7Q2M1P5 1343 aa18.03■□□□□ 0.48
LDB3-203ENST00000372056 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
LDB3-203ENST00000372056 NEXMIFQ5QGS0 1516 aa18.01■□□□□ 0.47
LDB3-203ENST00000372056 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
LDB3-203ENST00000372056 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
LDB3-203ENST00000372056 PIK3C2GO75747 1445 aa17.99■□□□□ 0.47
LDB3-203ENST00000372056 EIF3AQ14152 1382 aaKnown RBP17.99■□□□□ 0.47
LDB3-203ENST00000372056 C14orf93Q9H972 538 aaKnown RBP17.99■□□□□ 0.47
LDB3-203ENST00000372056 SETD1BQ9UPS6 1966 aaKnown RBP17.98■□□□□ 0.47
LDB3-203ENST00000372056 THEMISQ8N1K5 641 aaPredicted RBP17.97■□□□□ 0.47
LDB3-203ENST00000372056 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
LDB3-203ENST00000372056 RIMS1Q86UR5 1692 aaKnown RBP17.96■□□□□ 0.47
LDB3-203ENST00000372056 SCAF11Q99590 1463 aaKnown RBP17.95■□□□□ 0.46
LDB3-203ENST00000372056 RIMS2Q9UQ26 1411 aa17.94■□□□□ 0.46
LDB3-203ENST00000372056 ST20-MTHFSA0A0A6YYL1 179 aa17.94■□□□□ 0.46
LDB3-203ENST00000372056 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
LDB3-203ENST00000372056 MYO5BQ9ULV0 1848 aa17.93■□□□□ 0.46
LDB3-203ENST00000372056 UBR1Q8IWV7 1749 aa17.93■□□□□ 0.46
LDB3-203ENST00000372056 TMEM2Q9UHN6 1383 aa17.93■□□□□ 0.46
LDB3-203ENST00000372056 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
LDB3-203ENST00000372056 CEBPAP49715 358 aaPredicted RBP17.92■□□□□ 0.46
LDB3-203ENST00000372056 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
LDB3-203ENST00000372056 CFAP70Q5T0N1 1121 aa17.9■□□□□ 0.46
LDB3-203ENST00000372056 SLIT1O75093 1534 aa17.89■□□□□ 0.45
LDB3-203ENST00000372056 IQGAP1P46940 1657 aa17.89■□□□□ 0.45
LDB3-203ENST00000372056 MYO3AQ8NEV4 1616 aa17.88■□□□□ 0.45
LDB3-203ENST00000372056 PTPRMP28827 1452 aa17.87■□□□□ 0.45
LDB3-203ENST00000372056 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
LDB3-203ENST00000372056 ZNF142P52746 1687 aaPredicted RBP17.86■□□□□ 0.45
LDB3-203ENST00000372056 CEP170BQ9Y4F5 1589 aaPredicted RBP17.86■□□□□ 0.45
LDB3-203ENST00000372056 SBNO2Q9Y2G9 1366 aa17.86■□□□□ 0.45
LDB3-203ENST00000372056 TMF1P82094 1093 aa17.86■□□□□ 0.45
LDB3-203ENST00000372056 PRKRIP1Q9H875 184 aaPredicted RBP17.86■□□□□ 0.45
LDB3-203ENST00000372056 GTF3C3Q9Y5Q9 886 aa17.85■□□□□ 0.45
LDB3-203ENST00000372056 PLEKHG1Q9ULL1 1385 aa17.84■□□□□ 0.45
LDB3-203ENST00000372056 ADGRB1O14514 1584 aa17.84■□□□□ 0.45
LDB3-203ENST00000372056 ALKQ9UM73 1620 aa17.83■□□□□ 0.44
LDB3-203ENST00000372056 POLR3GLQ9BT43 218 aa17.83■□□□□ 0.44
LDB3-203ENST00000372056 TXNDC2Q86VQ3 553 aa17.82■□□□□ 0.44
LDB3-203ENST00000372056 TESK2Q96S53 571 aa17.82■□□□□ 0.44
LDB3-203ENST00000372056 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
LDB3-203ENST00000372056 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
LDB3-203ENST00000372056 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
LDB3-203ENST00000372056 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
LDB3-203ENST00000372056 DIP2AQ14689 1571 aa17.79■□□□□ 0.44
LDB3-203ENST00000372056 NUTM2DQ5VT03 806 aaPredicted RBP17.79■□□□□ 0.44
LDB3-203ENST00000372056 DLC1Q96QB1 1528 aa17.78■□□□□ 0.44
LDB3-203ENST00000372056 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
LDB3-203ENST00000372056 TBX22Q9Y458 520 aa17.78■□□□□ 0.44
LDB3-203ENST00000372056 ABCC11Q96J66 1382 aa17.78■□□□□ 0.44
LDB3-203ENST00000372056 DISP3Q9P2K9 1392 aa17.78■□□□□ 0.44
LDB3-203ENST00000372056 YTHDC2Q9H6S0 1430 aaKnown RBP17.77■□□□□ 0.44
LDB3-203ENST00000372056 LRPPRCP42704 1394 aaKnown RBP17.77■□□□□ 0.44
LDB3-203ENST00000372056 BCANQ96GW7 911 aa17.77■□□□□ 0.43
LDB3-203ENST00000372056 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
LDB3-203ENST00000372056 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
LDB3-203ENST00000372056 LTKP29376 864 aa17.74■□□□□ 0.43
LDB3-203ENST00000372056 TMEM132EQ6IEE7 984 aa17.74■□□□□ 0.43
LDB3-203ENST00000372056 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
LDB3-203ENST00000372056 NRXN3Q9Y4C0 1643 aa17.73■□□□□ 0.43
LDB3-203ENST00000372056 MED14O60244 1454 aa17.73■□□□□ 0.43
LDB3-203ENST00000372056 SETD1AO15047 1707 aaKnown RBP17.73■□□□□ 0.43
LDB3-203ENST00000372056 TECPR2O15040 1411 aa17.72■□□□□ 0.43
LDB3-203ENST00000372056 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
LDB3-203ENST00000372056 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.43
LDB3-203ENST00000372056 POGKQ9P215 609 aa17.71■□□□□ 0.43
LDB3-203ENST00000372056 EVC2Q86UK5 1308 aa17.71■□□□□ 0.43
LDB3-203ENST00000372056 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.42
LDB3-203ENST00000372056 KNDC1Q76NI1 1749 aa17.7■□□□□ 0.42
LDB3-203ENST00000372056 ASXL1Q8IXJ9 1541 aa17.7■□□□□ 0.42
LDB3-203ENST00000372056 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
LDB3-203ENST00000372056 QRICH2Q9H0J4 1663 aa17.68■□□□□ 0.42
LDB3-203ENST00000372056 KTN1Q86UP2 1357 aaKnown RBP17.68■□□□□ 0.42
LDB3-203ENST00000372056 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
LDB3-203ENST00000372056 STK26Q9P289 416 aa17.66■□□□□ 0.42
LDB3-203ENST00000372056 METP08581 1390 aa17.66■□□□□ 0.42
LDB3-203ENST00000372056 KDM4FA0A1W2PPD8 638 aa17.65■□□□□ 0.42
LDB3-203ENST00000372056 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms