RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 FKBP8Q14318 412 aa15.9■□□□□ 0.14
TSPAN1-201ENST00000372003 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
TSPAN1-201ENST00000372003 PIK3C2BO00750 1634 aa15.9■□□□□ 0.14
TSPAN1-201ENST00000372003 CLTCL1P53675 1640 aa15.89■□□□□ 0.13
TSPAN1-201ENST00000372003 ANP32CO43423 234 aa15.89■□□□□ 0.13
TSPAN1-201ENST00000372003 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
TSPAN1-201ENST00000372003 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
TSPAN1-201ENST00000372003 NCKAP5LQ9HCH0 1330 aa15.88■□□□□ 0.13
TSPAN1-201ENST00000372003 TXNDC2Q86VQ3 553 aa15.87■□□□□ 0.13
TSPAN1-201ENST00000372003 ANKLE2Q86XL3 938 aa15.87■□□□□ 0.13
TSPAN1-201ENST00000372003 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
TSPAN1-201ENST00000372003 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
TSPAN1-201ENST00000372003 LTKP29376 864 aa15.86■□□□□ 0.13
TSPAN1-201ENST00000372003 ADGRB3O60242 1522 aa15.86■□□□□ 0.13
TSPAN1-201ENST00000372003 ZNF142P52746 1687 aaPredicted RBP15.84■□□□□ 0.13
TSPAN1-201ENST00000372003 HDGFP51858 240 aaKnown RBP15.84■□□□□ 0.13
TSPAN1-201ENST00000372003 TMEM131LA2VDJ0 1609 aa15.83■□□□□ 0.13
TSPAN1-201ENST00000372003 BCANQ96GW7 911 aa15.83■□□□□ 0.13
TSPAN1-201ENST00000372003 UBR1Q8IWV7 1749 aa15.83■□□□□ 0.13
TSPAN1-201ENST00000372003 RIMS2Q9UQ26 1411 aa15.82■□□□□ 0.12
TSPAN1-201ENST00000372003 ERICH6BQ5W0A0 696 aa15.82■□□□□ 0.12
TSPAN1-201ENST00000372003 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.82■□□□□ 0.12
TSPAN1-201ENST00000372003 SPATA31E1Q6ZUB1 1445 aa15.82■□□□□ 0.12
TSPAN1-201ENST00000372003 KDM2AQ9Y2K7 1162 aa15.81■□□□□ 0.12
TSPAN1-201ENST00000372003 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
TSPAN1-201ENST00000372003 ARHGAP23Q9P227 1491 aa15.8■□□□□ 0.12
TSPAN1-201ENST00000372003 RPGRIP1LQ68CZ1 1315 aa15.79■□□□□ 0.12
TSPAN1-201ENST00000372003 DCAF11Q8TEB1 546 aa15.79■□□□□ 0.12
TSPAN1-201ENST00000372003 SLIT1O75093 1534 aa15.79■□□□□ 0.12
TSPAN1-201ENST00000372003 TONSLQ96HA7 1378 aa15.79■□□□□ 0.12
TSPAN1-201ENST00000372003 VGFO15240 615 aaPredicted RBP15.79■□□□□ 0.12
TSPAN1-201ENST00000372003 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
TSPAN1-201ENST00000372003 ZFYVE9O95405 1425 aa15.78■□□□□ 0.12
TSPAN1-201ENST00000372003 KIF1BO60333 1816 aa15.78■□□□□ 0.12
TSPAN1-201ENST00000372003 KDM5AP29375 1690 aaKnown RBP15.77■□□□□ 0.11
TSPAN1-201ENST00000372003 L3MBTL2Q969R5 705 aa15.76■□□□□ 0.11
TSPAN1-201ENST00000372003 SLC26A8Q96RN1 970 aa15.76■□□□□ 0.11
TSPAN1-201ENST00000372003 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
TSPAN1-201ENST00000372003 MYO5BQ9ULV0 1848 aa15.76■□□□□ 0.11
TSPAN1-201ENST00000372003 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
TSPAN1-201ENST00000372003 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
TSPAN1-201ENST00000372003 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
TSPAN1-201ENST00000372003 NEXMIFQ5QGS0 1516 aa15.74■□□□□ 0.11
TSPAN1-201ENST00000372003 PLEKHG1Q9ULL1 1385 aa15.73■□□□□ 0.11
TSPAN1-201ENST00000372003 STRCQ7RTU9 1775 aa15.71■□□□□ 0.11
TSPAN1-201ENST00000372003 MED14O60244 1454 aa15.71■□□□□ 0.11
TSPAN1-201ENST00000372003 NEURL4Q96JN8 1562 aa15.71■□□□□ 0.11
TSPAN1-201ENST00000372003 BCL11AQ9H165 835 aa15.69■□□□□ 0.1
TSPAN1-201ENST00000372003 STAC3Q96MF2 364 aa15.68■□□□□ 0.1
TSPAN1-201ENST00000372003 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
TSPAN1-201ENST00000372003 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
TSPAN1-201ENST00000372003 POLR1AO95602 1720 aaPredicted RBP15.66■□□□□ 0.1
TSPAN1-201ENST00000372003 ADAMTS13Q76LX8 1427 aa15.66■□□□□ 0.1
TSPAN1-201ENST00000372003 ZNF335Q9H4Z2 1342 aaPredicted RBP15.65■□□□□ 0.1
TSPAN1-201ENST00000372003 PPLO60437 1756 aa15.65■□□□□ 0.1
TSPAN1-201ENST00000372003 IQGAP1P46940 1657 aa15.65■□□□□ 0.1
TSPAN1-201ENST00000372003 MYOM2P54296 1465 aa15.65■□□□□ 0.1
TSPAN1-201ENST00000372003 TMEM132EQ6IEE7 984 aa15.65■□□□□ 0.1
TSPAN1-201ENST00000372003 C14orf93Q9H972 538 aaKnown RBP15.65■□□□□ 0.1
TSPAN1-201ENST00000372003 PIK3C2GO75747 1445 aa15.64■□□□□ 0.09
TSPAN1-201ENST00000372003 METP08581 1390 aa15.64■□□□□ 0.09
TSPAN1-201ENST00000372003 NBPF8Q3BBV2 869 aa15.62■□□□□ 0.09
TSPAN1-201ENST00000372003 STK26Q9P289 416 aa15.61■□□□□ 0.09
TSPAN1-201ENST00000372003 AMOTL2Q9Y2J4 779 aa15.61■□□□□ 0.09
TSPAN1-201ENST00000372003 NRXN1Q9ULB1 1477 aa15.61■□□□□ 0.09
TSPAN1-201ENST00000372003 SETBP1Q9Y6X0 1596 aa15.61■□□□□ 0.09
TSPAN1-201ENST00000372003 IFT172Q9UG01 1749 aa15.61■□□□□ 0.09
TSPAN1-201ENST00000372003 KCNA6P17658 529 aa15.61■□□□□ 0.09
TSPAN1-201ENST00000372003 PRAG1Q86YV5 1406 aa15.61■□□□□ 0.09
TSPAN1-201ENST00000372003 ALKQ9UM73 1620 aa15.6■□□□□ 0.09
TSPAN1-201ENST00000372003 NBPF1Q3BBV0 1214 aa15.6■□□□□ 0.09
TSPAN1-201ENST00000372003 NRXN3Q9Y4C0 1643 aa15.59■□□□□ 0.09
TSPAN1-201ENST00000372003 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.09
TSPAN1-201ENST00000372003 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.09
TSPAN1-201ENST00000372003 PTPRUQ92729 1446 aa15.58■□□□□ 0.08
TSPAN1-201ENST00000372003 HNRNPUQ00839 825 aaKnown RBP eCLIP15.57■□□□□ 0.08
TSPAN1-201ENST00000372003 HIRIP3Q9BW71 556 aaPredicted RBP15.57■□□□□ 0.08
TSPAN1-201ENST00000372003 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
TSPAN1-201ENST00000372003 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
TSPAN1-201ENST00000372003 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
TSPAN1-201ENST00000372003 MSH5O43196 834 aa15.55■□□□□ 0.08
TSPAN1-201ENST00000372003 TRAK1Q9UPV9 953 aa15.55■□□□□ 0.08
TSPAN1-201ENST00000372003 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.08
TSPAN1-201ENST00000372003 ROCK2O75116 1388 aaKnown RBP15.53■□□□□ 0.08
TSPAN1-201ENST00000372003 WASHC2AQ641Q2 1341 aa15.53■□□□□ 0.08
TSPAN1-201ENST00000372003 YTHDC2Q9H6S0 1430 aaKnown RBP15.52■□□□□ 0.08
TSPAN1-201ENST00000372003 WAPLQ7Z5K2 1190 aa15.52■□□□□ 0.08
TSPAN1-201ENST00000372003 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.07
TSPAN1-201ENST00000372003 ASXL1Q8IXJ9 1541 aa15.51■□□□□ 0.07
TSPAN1-201ENST00000372003 HSPA5P11021 654 aaKnown RBP15.51■□□□□ 0.07
TSPAN1-201ENST00000372003 ERICH6Q7L0X2 663 aa15.51■□□□□ 0.07
TSPAN1-201ENST00000372003 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
TSPAN1-201ENST00000372003 CARD11Q9BXL7 1154 aa15.51■□□□□ 0.07
TSPAN1-201ENST00000372003 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
TSPAN1-201ENST00000372003 ROBO2Q9HCK4 1378 aa15.5■□□□□ 0.07
TSPAN1-201ENST00000372003 SAFB2Q14151 953 aaKnown RBP eCLIP15.5■□□□□ 0.07
TSPAN1-201ENST00000372003 ZBED9Q6R2W3 1325 aa15.5■□□□□ 0.07
TSPAN1-201ENST00000372003 TMEM94Q12767 1356 aa15.5■□□□□ 0.07
TSPAN1-201ENST00000372003 POGKQ9P215 609 aa15.5■□□□□ 0.07
TSPAN1-201ENST00000372003 LTBP4Q8N2S1 1624 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms