RNA–Protein interactions for RNA: ENST00000371628.7

LONRF3-202, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LONRF3, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-202ENST00000371628 CDCA8Q53HL2 280 aa25.7■■□□□ 1.71
LONRF3-202ENST00000371628 FAM161AQ3B820 660 aa25.69■■□□□ 1.7
LONRF3-202ENST00000371628 IL27Q8NEV9 243 aa25.68■■□□□ 1.7
LONRF3-202ENST00000371628 PIK3C2GO75747 1445 aa25.68■■□□□ 1.7
LONRF3-202ENST00000371628 ASXL1Q8IXJ9 1541 aa25.67■■□□□ 1.7
LONRF3-202ENST00000371628 DAXXQ9UER7 740 aaPredicted RBP25.66■■□□□ 1.7
LONRF3-202ENST00000371628 SLFN5Q08AF3 891 aa25.65■■□□□ 1.7
LONRF3-202ENST00000371628 C8orf34Q49A92 452 aa25.65■■□□□ 1.7
LONRF3-202ENST00000371628 SCAF11Q99590 1463 aaKnown RBP25.64■■□□□ 1.7
LONRF3-202ENST00000371628 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
LONRF3-202ENST00000371628 NFKBIBQ15653 356 aa25.62■■□□□ 1.69
LONRF3-202ENST00000371628 SCAPERQ9BY12 1400 aa25.62■■□□□ 1.69
LONRF3-202ENST00000371628 EIF3AQ14152 1382 aaKnown RBP25.62■■□□□ 1.69
LONRF3-202ENST00000371628 SPHKAPQ2M3C7 1700 aa25.61■■□□□ 1.69
LONRF3-202ENST00000371628 TRMT2AQ8IZ69 625 aaKnown RBP25.61■■□□□ 1.69
LONRF3-202ENST00000371628 STAC3Q96MF2 364 aa25.61■■□□□ 1.69
LONRF3-202ENST00000371628 SLC4A3P48751 1232 aa25.6■■□□□ 1.69
LONRF3-202ENST00000371628 ABCC2Q92887 1545 aa25.6■■□□□ 1.69
LONRF3-202ENST00000371628 GSE1Q14687 1217 aa25.59■■□□□ 1.69
LONRF3-202ENST00000371628 TRPM2O94759 1503 aa25.59■■□□□ 1.69
LONRF3-202ENST00000371628 MYOM1P52179 1685 aa25.58■■□□□ 1.69
LONRF3-202ENST00000371628 NKTRP30414 1462 aaKnown RBP25.58■■□□□ 1.69
LONRF3-202ENST00000371628 CEP152O94986 1710 aa25.57■■□□□ 1.68
LONRF3-202ENST00000371628 PLCH2O75038 1416 aa25.56■■□□□ 1.68
LONRF3-202ENST00000371628 CCDC146Q8IYE0 955 aa25.54■■□□□ 1.68
LONRF3-202ENST00000371628 RGS3P49796 1198 aa25.54■■□□□ 1.68
LONRF3-202ENST00000371628 ABCC1P33527 1531 aa25.53■■□□□ 1.68
LONRF3-202ENST00000371628 EFCAB2Q5VUJ9 269 aa25.52■■□□□ 1.68
LONRF3-202ENST00000371628 PTPRTO14522 1441 aa25.52■■□□□ 1.68
LONRF3-202ENST00000371628 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
LONRF3-202ENST00000371628 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
LONRF3-202ENST00000371628 APAF1O14727 1248 aa25.52■■□□□ 1.68
LONRF3-202ENST00000371628 E9PSI1 815 aa25.51■■□□□ 1.68
LONRF3-202ENST00000371628 SPINK5Q9NQ38 1064 aaPredicted RBP25.51■■□□□ 1.68
LONRF3-202ENST00000371628 RTN4Q9NQC3 1192 aaKnown RBP25.51■■□□□ 1.67
LONRF3-202ENST00000371628 CLTCL1P53675 1640 aa25.5■■□□□ 1.67
LONRF3-202ENST00000371628 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
LONRF3-202ENST00000371628 NGEFQ8N5V2 710 aa25.49■■□□□ 1.67
LONRF3-202ENST00000371628 BCAR3O75815 825 aa25.48■■□□□ 1.67
LONRF3-202ENST00000371628 KIAA1210Q9ULL0 1709 aa25.48■■□□□ 1.67
LONRF3-202ENST00000371628 CHD1O14646 1710 aa25.46■■□□□ 1.67
LONRF3-202ENST00000371628 SLC24A1O60721 1099 aa25.46■■□□□ 1.67
LONRF3-202ENST00000371628 FRAT1Q92837 279 aaPredicted RBP25.45■■□□□ 1.66
LONRF3-202ENST00000371628 VIRMAQ69YN4 1812 aaKnown RBP25.44■■□□□ 1.66
LONRF3-202ENST00000371628 RTEL1-TNFRSF6BF6WH68 1400 aa25.44■■□□□ 1.66
LONRF3-202ENST00000371628 CGNL1Q0VF96 1302 aa25.44■■□□□ 1.66
LONRF3-202ENST00000371628 SPAG9O60271 1321 aaKnown RBP25.43■■□□□ 1.66
LONRF3-202ENST00000371628 NINLQ9Y2I6 1382 aa25.43■■□□□ 1.66
LONRF3-202ENST00000371628 PDE3AQ14432 1141 aa25.43■■□□□ 1.66
LONRF3-202ENST00000371628 ANO8Q9HCE9 1232 aaPredicted RBP25.43■■□□□ 1.66
LONRF3-202ENST00000371628 TET3O43151 1660 aa25.43■■□□□ 1.66
LONRF3-202ENST00000371628 DEPDC5O75140 1603 aa25.42■■□□□ 1.66
LONRF3-202ENST00000371628 BRPF3Q9ULD4 1205 aa25.42■■□□□ 1.66
LONRF3-202ENST00000371628 ZFYVE16Q7Z3T8 1539 aa25.41■■□□□ 1.66
LONRF3-202ENST00000371628 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
LONRF3-202ENST00000371628 IGHDP01880 384 aa25.4■■□□□ 1.66
LONRF3-202ENST00000371628 NEURL4Q96JN8 1562 aa25.4■■□□□ 1.66
LONRF3-202ENST00000371628 ERCC6L2Q5T890 1561 aa25.4■■□□□ 1.66
LONRF3-202ENST00000371628 DMRT2Q9Y5R5 561 aa25.39■■□□□ 1.66
LONRF3-202ENST00000371628 FRAT2O75474 233 aaPredicted RBP25.39■■□□□ 1.65
LONRF3-202ENST00000371628 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
LONRF3-202ENST00000371628 ZCCHC11Q5TAX3 1644 aaKnown RBP25.38■■□□□ 1.65
LONRF3-202ENST00000371628 MAPK8IP3Q9UPT6 1336 aa25.38■■□□□ 1.65
LONRF3-202ENST00000371628 CLUAP1Q96AJ1 413 aa25.37■■□□□ 1.65
LONRF3-202ENST00000371628 CARD14Q9BXL6 1004 aa25.37■■□□□ 1.65
LONRF3-202ENST00000371628 KANK1Q14678 1352 aa25.36■■□□□ 1.65
LONRF3-202ENST00000371628 POLR3AO14802 1390 aaPredicted RBP25.35■■□□□ 1.65
LONRF3-202ENST00000371628 USP19O94966 1318 aa25.35■■□□□ 1.65
LONRF3-202ENST00000371628 MYOM2P54296 1465 aa25.35■■□□□ 1.65
LONRF3-202ENST00000371628 MAP3K4Q9Y6R4 1608 aa25.35■■□□□ 1.65
LONRF3-202ENST00000371628 AFAP1Q8N556 730 aa25.34■■□□□ 1.65
LONRF3-202ENST00000371628 CANXP27824 592 aaKnown RBP25.34■■□□□ 1.65
LONRF3-202ENST00000371628 WWC1Q8IX03 1113 aa25.34■■□□□ 1.65
LONRF3-202ENST00000371628 VWDEQ8N2E2 1590 aa25.34■■□□□ 1.65
LONRF3-202ENST00000371628 CFAP70Q5T0N1 1121 aa25.33■■□□□ 1.65
LONRF3-202ENST00000371628 ABCA6Q8N139 1617 aa25.33■■□□□ 1.65
LONRF3-202ENST00000371628 ARAP3Q8WWN8 1544 aa25.32■■□□□ 1.64
LONRF3-202ENST00000371628 COG6Q9Y2V7 657 aa25.31■■□□□ 1.64
LONRF3-202ENST00000371628 PANK1Q8TE04 598 aa25.31■■□□□ 1.64
LONRF3-202ENST00000371628 UHRF1BP1LA0JNW5 1464 aa25.3■■□□□ 1.64
LONRF3-202ENST00000371628 SBNO2Q9Y2G9 1366 aa25.28■■□□□ 1.64
LONRF3-202ENST00000371628 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
LONRF3-202ENST00000371628 AAMPQ13685 434 aa25.27■■□□□ 1.64
LONRF3-202ENST00000371628 BECN1Q14457 450 aa25.27■■□□□ 1.64
LONRF3-202ENST00000371628 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
LONRF3-202ENST00000371628 ATP7AQ04656 1500 aa25.26■■□□□ 1.63
LONRF3-202ENST00000371628 SEC24BO95487 1268 aa25.25■■□□□ 1.63
LONRF3-202ENST00000371628 PMFBP1Q8TBY8 1022 aa25.24■■□□□ 1.63
LONRF3-202ENST00000371628 KIF1BO60333 1816 aa25.24■■□□□ 1.63
LONRF3-202ENST00000371628 SHPRHQ149N8 1683 aa25.24■■□□□ 1.63
LONRF3-202ENST00000371628 INO80Q9ULG1 1556 aaPredicted RBP25.24■■□□□ 1.63
LONRF3-202ENST00000371628 UGGT1Q9NYU2 1555 aa25.24■■□□□ 1.63
LONRF3-202ENST00000371628 NLRP1Q9C000 1473 aa25.24■■□□□ 1.63
LONRF3-202ENST00000371628 IFT172Q9UG01 1749 aa25.23■■□□□ 1.63
LONRF3-202ENST00000371628 KIF3BO15066 747 aa25.23■■□□□ 1.63
LONRF3-202ENST00000371628 RARSP54136 660 aaKnown RBP25.23■■□□□ 1.63
LONRF3-202ENST00000371628 RUNDC1Q96C34 613 aa25.23■■□□□ 1.63
LONRF3-202ENST00000371628 ZMYM3Q14202 1370 aa25.22■■□□□ 1.63
LONRF3-202ENST00000371628 NRXN1Q9ULB1 1477 aa25.21■■□□□ 1.63
LONRF3-202ENST00000371628 IQSEC2Q5JU85 1478 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms