RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ABTB2Q8N961 1025 aa18.33■□□□□ 0.52
NDC1-201ENST00000371429 HMOX1P09601 288 aa18.33■□□□□ 0.52
NDC1-201ENST00000371429 C9orf84Q5VXU9 1444 aa18.31■□□□□ 0.52
NDC1-201ENST00000371429 EFCAB5A4FU69 1503 aa18.31■□□□□ 0.52
NDC1-201ENST00000371429 PRAM1Q96QH2 718 aa18.31■□□□□ 0.52
NDC1-201ENST00000371429 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
NDC1-201ENST00000371429 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
NDC1-201ENST00000371429 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
NDC1-201ENST00000371429 USP35Q9P2H5 1018 aa18.3■□□□□ 0.52
NDC1-201ENST00000371429 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
NDC1-201ENST00000371429 POGZQ7Z3K3 1410 aa18.29■□□□□ 0.52
NDC1-201ENST00000371429 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
NDC1-201ENST00000371429 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
NDC1-201ENST00000371429 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
NDC1-201ENST00000371429 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
NDC1-201ENST00000371429 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
NDC1-201ENST00000371429 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
NDC1-201ENST00000371429 API5Q9BZZ5 524 aaKnown RBP18.28■□□□□ 0.52
NDC1-201ENST00000371429 KIAA0586Q9BVV6 1533 aa18.27■□□□□ 0.52
NDC1-201ENST00000371429 HFM1A2PYH4 1435 aa18.27■□□□□ 0.52
NDC1-201ENST00000371429 TOP2BQ02880 1626 aa18.27■□□□□ 0.52
NDC1-201ENST00000371429 GNAI1P63096 354 aa18.27■□□□□ 0.51
NDC1-201ENST00000371429 RILPL2Q969X0 211 aa18.27■□□□□ 0.51
NDC1-201ENST00000371429 SLC26A8Q96RN1 970 aa18.27■□□□□ 0.51
NDC1-201ENST00000371429 PLIN1O60240 522 aa18.26■□□□□ 0.51
NDC1-201ENST00000371429 GBP4Q96PP9 640 aa18.26■□□□□ 0.51
NDC1-201ENST00000371429 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
NDC1-201ENST00000371429 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
NDC1-201ENST00000371429 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
NDC1-201ENST00000371429 CCDC7Q96M83 1385 aa18.25■□□□□ 0.51
NDC1-201ENST00000371429 MTHFSP49914 203 aa18.23■□□□□ 0.51
NDC1-201ENST00000371429 LRRFIP1Q32MZ4 808 aaKnown RBP18.23■□□□□ 0.51
NDC1-201ENST00000371429 DRC7Q8IY82 874 aa18.23■□□□□ 0.51
NDC1-201ENST00000371429 CCDC34Q96HJ3 373 aa18.23■□□□□ 0.51
NDC1-201ENST00000371429 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
NDC1-201ENST00000371429 NOL10Q9BSC4 688 aaKnown RBP18.22■□□□□ 0.51
NDC1-201ENST00000371429 STRN4Q9NRL3 753 aa18.22■□□□□ 0.51
NDC1-201ENST00000371429 NBPF1Q3BBV0 1214 aa18.22■□□□□ 0.51
NDC1-201ENST00000371429 VPS37DQ86XT2 251 aa18.22■□□□□ 0.51
NDC1-201ENST00000371429 DDX19BQ9UMR2 479 aa18.22■□□□□ 0.51
NDC1-201ENST00000371429 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
NDC1-201ENST00000371429 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
NDC1-201ENST00000371429 RASSF8Q8NHQ8 419 aa18.21■□□□□ 0.51
NDC1-201ENST00000371429 GLIPR1L2Q4G1C9 344 aa18.21■□□□□ 0.51
NDC1-201ENST00000371429 KIF3AQ9Y496 699 aa18.2■□□□□ 0.5
NDC1-201ENST00000371429 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
NDC1-201ENST00000371429 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
NDC1-201ENST00000371429 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
NDC1-201ENST00000371429 RBM19Q9Y4C8 960 aaKnown RBP18.2■□□□□ 0.5
NDC1-201ENST00000371429 ST18O60284 1047 aa18.19■□□□□ 0.5
NDC1-201ENST00000371429 RIC3Q7Z5B4 369 aa18.19■□□□□ 0.5
NDC1-201ENST00000371429 KIF16BQ96L93 1317 aa18.19■□□□□ 0.5
NDC1-201ENST00000371429 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
NDC1-201ENST00000371429 IFIT2P09913 472 aaKnown RBP18.19■□□□□ 0.5
NDC1-201ENST00000371429 G3BP1Q13283 466 aaKnown RBP eCLIP18.19■□□□□ 0.5
NDC1-201ENST00000371429 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
NDC1-201ENST00000371429 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
NDC1-201ENST00000371429 CENPQQ7L2Z9 268 aaPredicted RBP18.19■□□□□ 0.5
NDC1-201ENST00000371429 ZNF692Q9BU19 519 aaPredicted RBP18.18■□□□□ 0.5
NDC1-201ENST00000371429 HECW1Q76N89 1606 aa18.18■□□□□ 0.5
NDC1-201ENST00000371429 PLEKHO1Q53GL0 409 aaPredicted RBP18.18■□□□□ 0.5
NDC1-201ENST00000371429 NUTM2BA6NNL0 878 aaPredicted RBP18.17■□□□□ 0.5
NDC1-201ENST00000371429 NUTM2EB1AL46 878 aaPredicted RBP18.17■□□□□ 0.5
NDC1-201ENST00000371429 MARCH6O60337 910 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 NUTM2AQ8IVF1 878 aaPredicted RBP18.17■□□□□ 0.5
NDC1-201ENST00000371429 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 CD109Q6YHK3 1445 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 AMOTL1Q8IY63 956 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
NDC1-201ENST00000371429 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.16■□□□□ 0.5
NDC1-201ENST00000371429 PTMSP20962 102 aa18.16■□□□□ 0.5
NDC1-201ENST00000371429 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
NDC1-201ENST00000371429 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
NDC1-201ENST00000371429 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
NDC1-201ENST00000371429 ROCK1Q13464 1354 aa18.16■□□□□ 0.5
NDC1-201ENST00000371429 EXOC6Q8TAG9 804 aa18.16■□□□□ 0.5
NDC1-201ENST00000371429 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
NDC1-201ENST00000371429 FBXW7Q969H0 707 aa18.15■□□□□ 0.5
NDC1-201ENST00000371429 SYAP1Q96A49 352 aaPredicted RBP18.14■□□□□ 0.5
NDC1-201ENST00000371429 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.5
NDC1-201ENST00000371429 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.5
NDC1-201ENST00000371429 TATP17735 454 aaPredicted RBP18.14■□□□□ 0.49
NDC1-201ENST00000371429 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
NDC1-201ENST00000371429 APPP05067 770 aa18.13■□□□□ 0.49
NDC1-201ENST00000371429 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
NDC1-201ENST00000371429 AKAP17AQ02040 695 aaKnown RBP18.13■□□□□ 0.49
NDC1-201ENST00000371429 TOM1L2Q6ZVM7 507 aa18.13■□□□□ 0.49
NDC1-201ENST00000371429 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
NDC1-201ENST00000371429 SYNE3Q6ZMZ3 975 aa18.12■□□□□ 0.49
NDC1-201ENST00000371429 RAD21O60216 631 aa18.12■□□□□ 0.49
NDC1-201ENST00000371429 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
NDC1-201ENST00000371429 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
NDC1-201ENST00000371429 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
NDC1-201ENST00000371429 SMG6Q86US8 1419 aaKnown RBP18.12■□□□□ 0.49
NDC1-201ENST00000371429 TCP11L2Q8N4U5 519 aa18.12■□□□□ 0.49
NDC1-201ENST00000371429 CHMP4CQ96CF2 233 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms