RNA–Protein interactions for RNA: ENST00000371281.3

TTC4-201, Transcript of tetratricopeptide repeat domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC4, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4-201ENST00000371281 SCAF11Q99590 1463 aaKnown RBP18.48■□□□□ 0.55
TTC4-201ENST00000371281 SYNMO15061 1565 aa18.48■□□□□ 0.55
TTC4-201ENST00000371281 DISP3Q9P2K9 1392 aa18.46■□□□□ 0.55
TTC4-201ENST00000371281 CCDC184Q52MB2 194 aa18.46■□□□□ 0.55
TTC4-201ENST00000371281 AGLP35573 1532 aa18.45■□□□□ 0.54
TTC4-201ENST00000371281 PREX1Q8TCU6 1659 aa18.43■□□□□ 0.54
TTC4-201ENST00000371281 SETBP1Q9Y6X0 1596 aa18.43■□□□□ 0.54
TTC4-201ENST00000371281 ADGRF5Q8IZF2 1346 aa18.42■□□□□ 0.54
TTC4-201ENST00000371281 KTN1Q86UP2 1357 aaKnown RBP18.42■□□□□ 0.54
TTC4-201ENST00000371281 TMF1P82094 1093 aa18.41■□□□□ 0.54
TTC4-201ENST00000371281 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
TTC4-201ENST00000371281 MYO3AQ8NEV4 1616 aa18.4■□□□□ 0.54
TTC4-201ENST00000371281 RPGRIP1LQ68CZ1 1315 aa18.4■□□□□ 0.54
TTC4-201ENST00000371281 EIF3AQ14152 1382 aaKnown RBP18.4■□□□□ 0.54
TTC4-201ENST00000371281 ARHGEF40Q8TER5 1519 aa18.39■□□□□ 0.54
TTC4-201ENST00000371281 PIK3C2GO75747 1445 aa18.39■□□□□ 0.53
TTC4-201ENST00000371281 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
TTC4-201ENST00000371281 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
TTC4-201ENST00000371281 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
TTC4-201ENST00000371281 MYT1Q01538 1121 aa18.35■□□□□ 0.53
TTC4-201ENST00000371281 CHGAP10645 457 aaKnown RBP18.35■□□□□ 0.53
TTC4-201ENST00000371281 RALBP1Q15311 655 aa18.35■□□□□ 0.53
TTC4-201ENST00000371281 MYOM1P52179 1685 aa18.35■□□□□ 0.53
TTC4-201ENST00000371281 PER1O15534 1290 aaPredicted RBP18.34■□□□□ 0.53
TTC4-201ENST00000371281 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
TTC4-201ENST00000371281 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
TTC4-201ENST00000371281 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
TTC4-201ENST00000371281 ADGRB1O14514 1584 aa18.34■□□□□ 0.53
TTC4-201ENST00000371281 TMEM131LA2VDJ0 1609 aa18.34■□□□□ 0.53
TTC4-201ENST00000371281 PARD3Q8TEW0 1356 aa18.33■□□□□ 0.52
TTC4-201ENST00000371281 CLTCQ00610 1675 aaKnown RBP18.33■□□□□ 0.52
TTC4-201ENST00000371281 SLC52A1Q9NWF4 448 aa18.32■□□□□ 0.52
TTC4-201ENST00000371281 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
TTC4-201ENST00000371281 ERVK-7P63135 1459 aa18.32■□□□□ 0.52
TTC4-201ENST00000371281 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
TTC4-201ENST00000371281 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
TTC4-201ENST00000371281 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
TTC4-201ENST00000371281 ZFYVE9O95405 1425 aa18.31■□□□□ 0.52
TTC4-201ENST00000371281 BRD4O60885 1362 aaPredicted RBP18.3■□□□□ 0.52
TTC4-201ENST00000371281 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
TTC4-201ENST00000371281 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
TTC4-201ENST00000371281 IDI1Q13907 227 aa18.29■□□□□ 0.52
TTC4-201ENST00000371281 PANK3Q9H999 370 aa18.28■□□□□ 0.52
TTC4-201ENST00000371281 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.52
TTC4-201ENST00000371281 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.52
TTC4-201ENST00000371281 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
TTC4-201ENST00000371281 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
TTC4-201ENST00000371281 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
TTC4-201ENST00000371281 SUPT16HQ9Y5B9 1047 aaKnown RBP18.26■□□□□ 0.51
TTC4-201ENST00000371281 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
TTC4-201ENST00000371281 ARHGEF28Q8N1W1 1705 aaKnown RBP18.24■□□□□ 0.51
TTC4-201ENST00000371281 LRPPRCP42704 1394 aaKnown RBP18.24■□□□□ 0.51
TTC4-201ENST00000371281 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
TTC4-201ENST00000371281 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
TTC4-201ENST00000371281 FBXO31Q5XUX0 539 aaPredicted RBP18.22■□□□□ 0.51
TTC4-201ENST00000371281 CENPJQ9HC77 1338 aaPredicted RBP18.22■□□□□ 0.51
TTC4-201ENST00000371281 ASXL1Q8IXJ9 1541 aa18.2■□□□□ 0.5
TTC4-201ENST00000371281 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
TTC4-201ENST00000371281 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
TTC4-201ENST00000371281 TRAK1Q9UPV9 953 aa18.17■□□□□ 0.5
TTC4-201ENST00000371281 TMEM132EQ6IEE7 984 aa18.17■□□□□ 0.5
TTC4-201ENST00000371281 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
TTC4-201ENST00000371281 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
TTC4-201ENST00000371281 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
TTC4-201ENST00000371281 A2ML1A8K2U0 1454 aa18.16■□□□□ 0.5
TTC4-201ENST00000371281 INSRP06213 1382 aa18.14■□□□□ 0.49
TTC4-201ENST00000371281 MLECQ14165 292 aa18.13■□□□□ 0.49
TTC4-201ENST00000371281 ALKQ9UM73 1620 aa18.13■□□□□ 0.49
TTC4-201ENST00000371281 TULP4Q9NRJ4 1543 aa18.12■□□□□ 0.49
TTC4-201ENST00000371281 NEFLP07196 543 aa18.12■□□□□ 0.49
TTC4-201ENST00000371281 FKBP8Q14318 412 aa18.12■□□□□ 0.49
TTC4-201ENST00000371281 ZMYM3Q14202 1370 aa18.11■□□□□ 0.49
TTC4-201ENST00000371281 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
TTC4-201ENST00000371281 PUS7Q96PZ0 661 aaKnown RBP18.11■□□□□ 0.49
TTC4-201ENST00000371281 PTPRMP28827 1452 aa18.1■□□□□ 0.49
TTC4-201ENST00000371281 USP32Q8NFA0 1604 aa18.1■□□□□ 0.49
TTC4-201ENST00000371281 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
TTC4-201ENST00000371281 RIMS2Q9UQ26 1411 aa18.08■□□□□ 0.49
TTC4-201ENST00000371281 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
TTC4-201ENST00000371281 YTHDC2Q9H6S0 1430 aaKnown RBP18.08■□□□□ 0.48
TTC4-201ENST00000371281 BLMP54132 1417 aaPredicted RBP18.07■□□□□ 0.48
TTC4-201ENST00000371281 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
TTC4-201ENST00000371281 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
TTC4-201ENST00000371281 CARD14Q9BXL6 1004 aa18.06■□□□□ 0.48
TTC4-201ENST00000371281 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
TTC4-201ENST00000371281 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
TTC4-201ENST00000371281 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
TTC4-201ENST00000371281 UBR1Q8IWV7 1749 aa18.04■□□□□ 0.48
TTC4-201ENST00000371281 TNRQ92752 1358 aa18.04■□□□□ 0.48
TTC4-201ENST00000371281 NUDCQ9Y266 331 aa18.02■□□□□ 0.47
TTC4-201ENST00000371281 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
TTC4-201ENST00000371281 STK26Q9P289 416 aa18■□□□□ 0.47
TTC4-201ENST00000371281 NINLQ9Y2I6 1382 aa18■□□□□ 0.47
TTC4-201ENST00000371281 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.99■□□□□ 0.47
TTC4-201ENST00000371281 SLC12A5Q9H2X9 1139 aa17.99■□□□□ 0.47
TTC4-201ENST00000371281 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
TTC4-201ENST00000371281 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
TTC4-201ENST00000371281 C3P01024 1663 aa17.98■□□□□ 0.47
TTC4-201ENST00000371281 FER1L4A9Z1Z3 1794 aa17.98■□□□□ 0.47
TTC4-201ENST00000371281 ERICH6BQ5W0A0 696 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms