RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
SMARCA1-203ENST00000371123 ZBTB7CA1YPR0 619 aa11.26□□□□□ -0.61
SMARCA1-203ENST00000371123 CENPJQ9HC77 1338 aaPredicted RBP11.25□□□□□ -0.61
SMARCA1-203ENST00000371123 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
SMARCA1-203ENST00000371123 ABCA9Q8IUA7 1624 aa11.25□□□□□ -0.61
SMARCA1-203ENST00000371123 DIP2BQ9P265 1576 aa11.25□□□□□ -0.61
SMARCA1-203ENST00000371123 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
SMARCA1-203ENST00000371123 ESPNB1AK53 854 aa11.25□□□□□ -0.61
SMARCA1-203ENST00000371123 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
SMARCA1-203ENST00000371123 NUTM2DQ5VT03 806 aaPredicted RBP11.24□□□□□ -0.61
SMARCA1-203ENST00000371123 ABCC5O15440 1437 aa11.24□□□□□ -0.61
SMARCA1-203ENST00000371123 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
SMARCA1-203ENST00000371123 GOLGA6L3A6NEY3 463 aa11.23□□□□□ -0.61
SMARCA1-203ENST00000371123 MCM4P33991 863 aa11.23□□□□□ -0.61
SMARCA1-203ENST00000371123 CALD1Q05682 793 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-203ENST00000371123 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-203ENST00000371123 CDK13Q14004 1512 aaKnown RBP11.23□□□□□ -0.61
SMARCA1-203ENST00000371123 FGD1P98174 961 aa11.23□□□□□ -0.61
SMARCA1-203ENST00000371123 UHRF1BP1Q6BDS2 1440 aa11.23□□□□□ -0.61
SMARCA1-203ENST00000371123 DAPK1P53355 1430 aa11.22□□□□□ -0.61
SMARCA1-203ENST00000371123 BCAR3O75815 825 aa11.22□□□□□ -0.61
SMARCA1-203ENST00000371123 BCL2L13Q9BXK5 485 aa11.22□□□□□ -0.61
SMARCA1-203ENST00000371123 CLUAP1Q96AJ1 413 aa11.22□□□□□ -0.61
SMARCA1-203ENST00000371123 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
SMARCA1-203ENST00000371123 RALBP1Q15311 655 aa11.21□□□□□ -0.61
SMARCA1-203ENST00000371123 PDCL3Q9H2J4 239 aa11.21□□□□□ -0.61
SMARCA1-203ENST00000371123 DNMT1P26358 1616 aaKnown RBP11.21□□□□□ -0.61
SMARCA1-203ENST00000371123 NLRP13Q86W25 1043 aa11.21□□□□□ -0.62
SMARCA1-203ENST00000371123 PTPRGP23470 1445 aa11.2□□□□□ -0.62
SMARCA1-203ENST00000371123 PLB1Q6P1J6 1458 aa11.2□□□□□ -0.62
SMARCA1-203ENST00000371123 GRPEL1Q9HAV7 217 aa11.2□□□□□ -0.62
SMARCA1-203ENST00000371123 ATP10BO94823 1461 aa11.2□□□□□ -0.62
SMARCA1-203ENST00000371123 DDIT3P35638 169 aa11.2□□□□□ -0.62
SMARCA1-203ENST00000371123 HNRNPMP52272 730 aaKnown RBP eCLIP11.2□□□□□ -0.622e-6■■■■□ 21.2
SMARCA1-203ENST00000371123 RRP7AQ9Y3A4 280 aaKnown RBP11.2□□□□□ -0.62
SMARCA1-203ENST00000371123 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
SMARCA1-203ENST00000371123 TNNQ9UQP3 1299 aa11.19□□□□□ -0.62
SMARCA1-203ENST00000371123 TRAK2O60296 914 aa11.19□□□□□ -0.62
SMARCA1-203ENST00000371123 TBC1D32Q96NH3 1257 aa11.19□□□□□ -0.62
SMARCA1-203ENST00000371123 EPRSP07814 1512 aaKnown RBP11.19□□□□□ -0.62
SMARCA1-203ENST00000371123 JARID2Q92833 1246 aaPredicted RBP11.19□□□□□ -0.62
SMARCA1-203ENST00000371123 KIAA1211Q6ZU35 1233 aa11.18□□□□□ -0.62
SMARCA1-203ENST00000371123 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
SMARCA1-203ENST00000371123 DISP3Q9P2K9 1392 aa11.18□□□□□ -0.62
SMARCA1-203ENST00000371123 ARID3AQ99856 593 aa11.17□□□□□ -0.62
SMARCA1-203ENST00000371123 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
SMARCA1-203ENST00000371123 ABCC10Q5T3U5 1492 aa11.17□□□□□ -0.62
SMARCA1-203ENST00000371123 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
SMARCA1-203ENST00000371123 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
SMARCA1-203ENST00000371123 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
SMARCA1-203ENST00000371123 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
SMARCA1-203ENST00000371123 SOX12O15370 315 aa11.15□□□□□ -0.62
SMARCA1-203ENST00000371123 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
SMARCA1-203ENST00000371123 KIAA1107Q9UPP5 1409 aa11.15□□□□□ -0.63
SMARCA1-203ENST00000371123 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.63
SMARCA1-203ENST00000371123 PREX2Q70Z35 1606 aa11.14□□□□□ -0.63
SMARCA1-203ENST00000371123 MRE11P49959 708 aa11.14□□□□□ -0.63
SMARCA1-203ENST00000371123 WDR7Q9Y4E6 1490 aa11.14□□□□□ -0.63
SMARCA1-203ENST00000371123 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
SMARCA1-203ENST00000371123 SLFN5Q08AF3 891 aa11.14□□□□□ -0.63
SMARCA1-203ENST00000371123 NBPF1Q3BBV0 1214 aa11.14□□□□□ -0.63
SMARCA1-203ENST00000371123 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
SMARCA1-203ENST00000371123 NCOA3Q9Y6Q9 1424 aa11.13□□□□□ -0.63
SMARCA1-203ENST00000371123 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
SMARCA1-203ENST00000371123 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
SMARCA1-203ENST00000371123 KDM5DQ9BY66 1539 aa11.13□□□□□ -0.63
SMARCA1-203ENST00000371123 INSRP06213 1382 aa11.13□□□□□ -0.63
SMARCA1-203ENST00000371123 CFAP74Q9C0B2 1584 aa11.13□□□□□ -0.63
SMARCA1-203ENST00000371123 MAGI2Q86UL8 1455 aa11.13□□□□□ -0.63
SMARCA1-203ENST00000371123 APBB1O00213 710 aa11.12□□□□□ -0.63
SMARCA1-203ENST00000371123 PANK1Q8TE04 598 aa11.12□□□□□ -0.63
SMARCA1-203ENST00000371123 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
SMARCA1-203ENST00000371123 TPM2P07951 284 aa11.12□□□□□ -0.63
SMARCA1-203ENST00000371123 TESK2Q96S53 571 aa11.12□□□□□ -0.63
SMARCA1-203ENST00000371123 CDC42BPBQ9Y5S2 1711 aa11.12□□□□□ -0.63
SMARCA1-203ENST00000371123 MYO5CQ9NQX4 1742 aa11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 RLBP1P12271 317 aa11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 PLEKHH2Q8IVE3 1493 aa11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 OFD1O75665 1012 aa11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 NUP155O75694 1391 aa11.11□□□□□ -0.63
SMARCA1-203ENST00000371123 ITSN2Q9NZM3 1697 aa11.1□□□□□ -0.63
SMARCA1-203ENST00000371123 TTC37Q6PGP7 1564 aa11.1□□□□□ -0.63
SMARCA1-203ENST00000371123 COL17A1Q9UMD9 1497 aaPredicted RBP11.1□□□□□ -0.63
SMARCA1-203ENST00000371123 U2SURPO15042 1029 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-203ENST00000371123 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
SMARCA1-203ENST00000371123 ZSCAN20P17040 1043 aaPredicted RBP11.09□□□□□ -0.63
SMARCA1-203ENST00000371123 PANK3Q9H999 370 aa11.09□□□□□ -0.63
SMARCA1-203ENST00000371123 PPP1R9BQ96SB3 815 aa11.08□□□□□ -0.64
SMARCA1-203ENST00000371123 STK26Q9P289 416 aa11.08□□□□□ -0.64
SMARCA1-203ENST00000371123 COG6Q9Y2V7 657 aa11.08□□□□□ -0.64
SMARCA1-203ENST00000371123 ASXL2Q76L83 1435 aa11.08□□□□□ -0.64
SMARCA1-203ENST00000371123 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
SMARCA1-203ENST00000371123 CROCC2H7BZ55 1655 aa11.08□□□□□ -0.64
SMARCA1-203ENST00000371123 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
SMARCA1-203ENST00000371123 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.07□□□□□ -0.64
SMARCA1-203ENST00000371123 TNPO1Q92973 898 aaKnown RBP11.07□□□□□ -0.64
SMARCA1-203ENST00000371123 ADGBQ8N7X0 1667 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms