RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 RTN4Q9NQC3 1192 aaKnown RBP23.04■■□□□ 1.28
CHUK-201ENST00000370397 CEP152O94986 1710 aa23.04■■□□□ 1.28
CHUK-201ENST00000370397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
CHUK-201ENST00000370397 SLC4A3P48751 1232 aa23.03■■□□□ 1.28
CHUK-201ENST00000370397 AMER1Q5JTC6 1135 aaPredicted RBP23.03■■□□□ 1.28
CHUK-201ENST00000370397 BRPF3Q9ULD4 1205 aa23.03■■□□□ 1.28
CHUK-201ENST00000370397 PIK3C2GO75747 1445 aa23.02■■□□□ 1.28
CHUK-201ENST00000370397 PPP2R1AP30153 589 aa23.01■■□□□ 1.27
CHUK-201ENST00000370397 FAM161AQ3B820 660 aa23.01■■□□□ 1.27
CHUK-201ENST00000370397 NLRP1Q9C000 1473 aa23■■□□□ 1.27
CHUK-201ENST00000370397 USP19O94966 1318 aa22.99■■□□□ 1.27
CHUK-201ENST00000370397 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
CHUK-201ENST00000370397 ASXL1Q8IXJ9 1541 aa22.99■■□□□ 1.27
CHUK-201ENST00000370397 FRAT1Q92837 279 aaPredicted RBP22.99■■□□□ 1.27
CHUK-201ENST00000370397 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
CHUK-201ENST00000370397 EIF3AQ14152 1382 aaKnown RBP22.98■■□□□ 1.27
CHUK-201ENST00000370397 TMF1P82094 1093 aa22.97■■□□□ 1.27
CHUK-201ENST00000370397 SLFN5Q08AF3 891 aa22.96■■□□□ 1.27
CHUK-201ENST00000370397 RSPH4AQ5TD94 716 aa22.96■■□□□ 1.27
CHUK-201ENST00000370397 KIAA1210Q9ULL0 1709 aa22.96■■□□□ 1.27
CHUK-201ENST00000370397 SPINK5Q9NQ38 1064 aaPredicted RBP22.95■■□□□ 1.27
CHUK-201ENST00000370397 NPC1L1Q9UHC9 1359 aa22.95■■□□□ 1.26
CHUK-201ENST00000370397 TRPM2O94759 1503 aa22.93■■□□□ 1.26
CHUK-201ENST00000370397 SCAPERQ9BY12 1400 aa22.93■■□□□ 1.26
CHUK-201ENST00000370397 NKTRP30414 1462 aaKnown RBP22.92■■□□□ 1.26
CHUK-201ENST00000370397 KDM5AP29375 1690 aaKnown RBP22.92■■□□□ 1.26
CHUK-201ENST00000370397 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
CHUK-201ENST00000370397 ERCC6L2Q5T890 1561 aa22.92■■□□□ 1.26
CHUK-201ENST00000370397 CLTCL1P53675 1640 aa22.91■■□□□ 1.26
CHUK-201ENST00000370397 ARHGAP5Q13017 1502 aa22.91■■□□□ 1.26
CHUK-201ENST00000370397 DEPDC5O75140 1603 aa22.91■■□□□ 1.26
CHUK-201ENST00000370397 GOLGA2Q08379 1002 aa22.9■■□□□ 1.26
CHUK-201ENST00000370397 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
CHUK-201ENST00000370397 FRAT2O75474 233 aaPredicted RBP22.88■■□□□ 1.25
CHUK-201ENST00000370397 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
CHUK-201ENST00000370397 NEURL4Q96JN8 1562 aa22.86■■□□□ 1.25
CHUK-201ENST00000370397 DMRT2Q9Y5R5 561 aa22.85■■□□□ 1.25
CHUK-201ENST00000370397 PTPRTO14522 1441 aa22.85■■□□□ 1.25
CHUK-201ENST00000370397 IGHDP01880 384 aa22.84■■□□□ 1.25
CHUK-201ENST00000370397 IFT172Q9UG01 1749 aa22.84■■□□□ 1.25
CHUK-201ENST00000370397 MYO3AQ8NEV4 1616 aa22.83■■□□□ 1.24
CHUK-201ENST00000370397 ABCC1P33527 1531 aa22.82■■□□□ 1.24
CHUK-201ENST00000370397 BCAR3O75815 825 aa22.82■■□□□ 1.24
CHUK-201ENST00000370397 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.81■■□□□ 1.24
CHUK-201ENST00000370397 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
CHUK-201ENST00000370397 SEC24BO95487 1268 aa22.8■■□□□ 1.24
CHUK-201ENST00000370397 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
CHUK-201ENST00000370397 ERVK-7P63135 1459 aa22.79■■□□□ 1.24
CHUK-201ENST00000370397 ABCA6Q8N139 1617 aa22.79■■□□□ 1.24
CHUK-201ENST00000370397 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHUK-201ENST00000370397 TET3O43151 1660 aa22.78■■□□□ 1.24
CHUK-201ENST00000370397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.24
CHUK-201ENST00000370397 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.77■■□□□ 1.24
CHUK-201ENST00000370397 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.24
CHUK-201ENST00000370397 RGS3P49796 1198 aa22.77■■□□□ 1.24
CHUK-201ENST00000370397 ZC3H13Q5T200 1668 aaKnown RBP22.76■■□□□ 1.23
CHUK-201ENST00000370397 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
CHUK-201ENST00000370397 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
CHUK-201ENST00000370397 ANTXR1Q9H6X2 564 aa22.75■■□□□ 1.23
CHUK-201ENST00000370397 ZFYVE16Q7Z3T8 1539 aa22.74■■□□□ 1.23
CHUK-201ENST00000370397 APAF1O14727 1248 aa22.74■■□□□ 1.23
CHUK-201ENST00000370397 NINLQ9Y2I6 1382 aa22.72■■□□□ 1.23
CHUK-201ENST00000370397 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
CHUK-201ENST00000370397 E9PSI1 815 aa22.71■■□□□ 1.23
CHUK-201ENST00000370397 PDE3AQ14432 1141 aa22.71■■□□□ 1.23
CHUK-201ENST00000370397 ZMYM3Q14202 1370 aa22.71■■□□□ 1.23
CHUK-201ENST00000370397 TRAPPC8Q9Y2L5 1435 aa22.7■■□□□ 1.22
CHUK-201ENST00000370397 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
CHUK-201ENST00000370397 PLCH2O75038 1416 aa22.7■■□□□ 1.22
CHUK-201ENST00000370397 MROH1Q8NDA8 1641 aa22.7■■□□□ 1.22
CHUK-201ENST00000370397 MROH2AA6NES4 1674 aa22.7■■□□□ 1.22
CHUK-201ENST00000370397 FAM43AQ8N2R8 423 aa22.69■■□□□ 1.22
CHUK-201ENST00000370397 MYOM2P54296 1465 aa22.68■■□□□ 1.22
CHUK-201ENST00000370397 ZCCHC11Q5TAX3 1644 aaKnown RBP22.68■■□□□ 1.22
CHUK-201ENST00000370397 CGNL1Q0VF96 1302 aa22.67■■□□□ 1.22
CHUK-201ENST00000370397 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
CHUK-201ENST00000370397 POGKQ9P215 609 aa22.67■■□□□ 1.22
CHUK-201ENST00000370397 NRXN1Q9ULB1 1477 aa22.67■■□□□ 1.22
CHUK-201ENST00000370397 POLR3AO14802 1390 aaPredicted RBP22.67■■□□□ 1.22
CHUK-201ENST00000370397 RTEL1-TNFRSF6BF6WH68 1400 aa22.67■■□□□ 1.22
CHUK-201ENST00000370397 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
CHUK-201ENST00000370397 CLUAP1Q96AJ1 413 aa22.66■■□□□ 1.22
CHUK-201ENST00000370397 CDCA8Q53HL2 280 aa22.65■■□□□ 1.22
CHUK-201ENST00000370397 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
CHUK-201ENST00000370397 INO80Q9ULG1 1556 aaPredicted RBP22.64■■□□□ 1.22
CHUK-201ENST00000370397 STAC3Q96MF2 364 aa22.64■■□□□ 1.22
CHUK-201ENST00000370397 MAPK8IP3Q9UPT6 1336 aa22.64■■□□□ 1.22
CHUK-201ENST00000370397 WWC1Q8IX03 1113 aa22.64■■□□□ 1.21
CHUK-201ENST00000370397 NGEFQ8N5V2 710 aa22.63■■□□□ 1.21
CHUK-201ENST00000370397 UGGT1Q9NYU2 1555 aa22.62■■□□□ 1.21
CHUK-201ENST00000370397 PANK1Q8TE04 598 aa22.62■■□□□ 1.21
CHUK-201ENST00000370397 KIF1BO60333 1816 aa22.62■■□□□ 1.21
CHUK-201ENST00000370397 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
CHUK-201ENST00000370397 ARAP3Q8WWN8 1544 aa22.59■■□□□ 1.21
CHUK-201ENST00000370397 SBNO2Q9Y2G9 1366 aa22.59■■□□□ 1.21
CHUK-201ENST00000370397 TBC1D32Q96NH3 1257 aa22.59■■□□□ 1.21
CHUK-201ENST00000370397 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
CHUK-201ENST00000370397 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
CHUK-201ENST00000370397 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
CHUK-201ENST00000370397 PCDHB15Q9Y5E8 787 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms