RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
SHOC2-202ENST00000369452 MYOM1P52179 1685 aa18.16■□□□□ 0.5
SHOC2-202ENST00000369452 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
SHOC2-202ENST00000369452 KIAA1210Q9ULL0 1709 aa18.14■□□□□ 0.5
SHOC2-202ENST00000369452 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
SHOC2-202ENST00000369452 SENP3-EIF4A1A0A087X0R7 540 aa18.13■□□□□ 0.49
SHOC2-202ENST00000369452 MYOM2P54296 1465 aa18.13■□□□□ 0.49
SHOC2-202ENST00000369452 CLTCQ00610 1675 aaKnown RBP18.13■□□□□ 0.49
SHOC2-202ENST00000369452 ZC3H13Q5T200 1668 aaKnown RBP18.13■□□□□ 0.49
SHOC2-202ENST00000369452 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
SHOC2-202ENST00000369452 NEXMIFQ5QGS0 1516 aa18.11■□□□□ 0.49
SHOC2-202ENST00000369452 ADGRB1O14514 1584 aa18.1■□□□□ 0.49
SHOC2-202ENST00000369452 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
SHOC2-202ENST00000369452 IDI1Q13907 227 aa18.09■□□□□ 0.49
SHOC2-202ENST00000369452 PIK3C2GO75747 1445 aa18.09■□□□□ 0.49
SHOC2-202ENST00000369452 CHGAP10645 457 aaKnown RBP18.08■□□□□ 0.48
SHOC2-202ENST00000369452 ARID4BQ4LE39 1312 aaPredicted RBP18.07■□□□□ 0.48
SHOC2-202ENST00000369452 SCAF11Q99590 1463 aaKnown RBP18.07■□□□□ 0.48
SHOC2-202ENST00000369452 ARHGAP31Q2M1Z3 1444 aa18.06■□□□□ 0.48
SHOC2-202ENST00000369452 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
SHOC2-202ENST00000369452 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
SHOC2-202ENST00000369452 ARHGEF40Q8TER5 1519 aa18.05■□□□□ 0.48
SHOC2-202ENST00000369452 ASXL1Q8IXJ9 1541 aa18.05■□□□□ 0.48
SHOC2-202ENST00000369452 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
SHOC2-202ENST00000369452 MYO3AQ8NEV4 1616 aa18.03■□□□□ 0.48
SHOC2-202ENST00000369452 MLECQ14165 292 aa18.03■□□□□ 0.48
SHOC2-202ENST00000369452 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
SHOC2-202ENST00000369452 ERVK-7P63135 1459 aa18.03■□□□□ 0.48
SHOC2-202ENST00000369452 PANK3Q9H999 370 aa18.01■□□□□ 0.47
SHOC2-202ENST00000369452 AGLP35573 1532 aa18.01■□□□□ 0.47
SHOC2-202ENST00000369452 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
SHOC2-202ENST00000369452 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
SHOC2-202ENST00000369452 QRICH2Q9H0J4 1663 aa18■□□□□ 0.47
SHOC2-202ENST00000369452 SETBP1Q9Y6X0 1596 aa17.99■□□□□ 0.47
SHOC2-202ENST00000369452 PARD3Q8TEW0 1356 aa17.97■□□□□ 0.47
SHOC2-202ENST00000369452 C14orf93Q9H972 538 aaKnown RBP17.97■□□□□ 0.47
SHOC2-202ENST00000369452 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
SHOC2-202ENST00000369452 CC2D1BQ5T0F9 858 aaKnown RBP17.96■□□□□ 0.47
SHOC2-202ENST00000369452 TRAK1Q9UPV9 953 aa17.96■□□□□ 0.47
SHOC2-202ENST00000369452 KDM5AP29375 1690 aaKnown RBP17.95■□□□□ 0.46
SHOC2-202ENST00000369452 TMF1P82094 1093 aa17.94■□□□□ 0.46
SHOC2-202ENST00000369452 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
SHOC2-202ENST00000369452 SPATA31D1Q6ZQQ2 1576 aa17.94■□□□□ 0.46
SHOC2-202ENST00000369452 SETD1AO15047 1707 aaKnown RBP17.94■□□□□ 0.46
SHOC2-202ENST00000369452 CARD14Q9BXL6 1004 aa17.92■□□□□ 0.46
SHOC2-202ENST00000369452 PTPRMP28827 1452 aa17.91■□□□□ 0.46
SHOC2-202ENST00000369452 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
SHOC2-202ENST00000369452 TULP4Q9NRJ4 1543 aa17.9■□□□□ 0.46
SHOC2-202ENST00000369452 STAC3Q96MF2 364 aa17.9■□□□□ 0.46
SHOC2-202ENST00000369452 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.45
SHOC2-202ENST00000369452 A2ML1A8K2U0 1454 aa17.89■□□□□ 0.45
SHOC2-202ENST00000369452 LRPPRCP42704 1394 aaKnown RBP17.88■□□□□ 0.45
SHOC2-202ENST00000369452 MYBBP1AQ9BQG0 1328 aaKnown RBP17.87■□□□□ 0.45
SHOC2-202ENST00000369452 ALKQ9UM73 1620 aa17.86■□□□□ 0.45
SHOC2-202ENST00000369452 ZMYM3Q14202 1370 aa17.86■□□□□ 0.45
SHOC2-202ENST00000369452 SLC52A1Q9NWF4 448 aa17.85■□□□□ 0.45
SHOC2-202ENST00000369452 RPGRIP1LQ68CZ1 1315 aa17.85■□□□□ 0.45
SHOC2-202ENST00000369452 SAFB2Q14151 953 aaKnown RBP eCLIP17.85■□□□□ 0.45
SHOC2-202ENST00000369452 ZFYVE9O95405 1425 aa17.83■□□□□ 0.45
SHOC2-202ENST00000369452 KTN1Q86UP2 1357 aaKnown RBP17.83■□□□□ 0.44
SHOC2-202ENST00000369452 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.44
SHOC2-202ENST00000369452 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
SHOC2-202ENST00000369452 STK26Q9P289 416 aa17.82■□□□□ 0.44
SHOC2-202ENST00000369452 BCANQ96GW7 911 aa17.82■□□□□ 0.44
SHOC2-202ENST00000369452 SLC12A5Q9H2X9 1139 aa17.81■□□□□ 0.44
SHOC2-202ENST00000369452 EIF3AQ14152 1382 aaKnown RBP17.81■□□□□ 0.44
SHOC2-202ENST00000369452 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
SHOC2-202ENST00000369452 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
SHOC2-202ENST00000369452 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
SHOC2-202ENST00000369452 RALBP1Q15311 655 aa17.81■□□□□ 0.44
SHOC2-202ENST00000369452 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
SHOC2-202ENST00000369452 ZBED9Q6R2W3 1325 aa17.8■□□□□ 0.44
SHOC2-202ENST00000369452 FKBP8Q14318 412 aa17.8■□□□□ 0.44
SHOC2-202ENST00000369452 VGFO15240 615 aaPredicted RBP17.79■□□□□ 0.44
SHOC2-202ENST00000369452 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
SHOC2-202ENST00000369452 C3P01024 1663 aa17.79■□□□□ 0.44
SHOC2-202ENST00000369452 PLEKHH1Q9ULM0 1364 aa17.78■□□□□ 0.44
SHOC2-202ENST00000369452 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
SHOC2-202ENST00000369452 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
SHOC2-202ENST00000369452 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
SHOC2-202ENST00000369452 RIMS2Q9UQ26 1411 aa17.76■□□□□ 0.43
SHOC2-202ENST00000369452 NLRP13Q86W25 1043 aa17.75■□□□□ 0.43
SHOC2-202ENST00000369452 METP08581 1390 aa17.75■□□□□ 0.43
SHOC2-202ENST00000369452 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
SHOC2-202ENST00000369452 SALL2Q9Y467 1007 aaPredicted RBP17.74■□□□□ 0.43
SHOC2-202ENST00000369452 WAPLQ7Z5K2 1190 aa17.73■□□□□ 0.43
SHOC2-202ENST00000369452 FER1L4A9Z1Z3 1794 aa17.73■□□□□ 0.43
SHOC2-202ENST00000369452 PRAM1Q96QH2 718 aa17.73■□□□□ 0.43
SHOC2-202ENST00000369452 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
SHOC2-202ENST00000369452 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
SHOC2-202ENST00000369452 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
SHOC2-202ENST00000369452 SHPRHQ149N8 1683 aa17.71■□□□□ 0.43
SHOC2-202ENST00000369452 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
SHOC2-202ENST00000369452 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.43
SHOC2-202ENST00000369452 MINK1Q8N4C8 1332 aaPredicted RBP17.7■□□□□ 0.42
SHOC2-202ENST00000369452 ADAMTS8Q9UP79 889 aa17.7■□□□□ 0.42
SHOC2-202ENST00000369452 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
SHOC2-202ENST00000369452 LTKP29376 864 aa17.69■□□□□ 0.42
SHOC2-202ENST00000369452 CDCA7LQ96GN5 454 aa17.68■□□□□ 0.42
SHOC2-202ENST00000369452 TNRQ92752 1358 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms