RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 IQGAP1P46940 1657 aa23.58■■□□□ 1.36
PHGDH-202ENST00000369409 NRXN1Q9ULB1 1477 aa23.57■■□□□ 1.36
PHGDH-202ENST00000369409 SLC52A1Q9NWF4 448 aa23.57■■□□□ 1.36
PHGDH-202ENST00000369409 NEXMIFQ5QGS0 1516 aa23.57■■□□□ 1.36
PHGDH-202ENST00000369409 FER1L4A9Z1Z3 1794 aa23.56■■□□□ 1.36
PHGDH-202ENST00000369409 IDI1Q13907 227 aa23.56■■□□□ 1.36
PHGDH-202ENST00000369409 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
PHGDH-202ENST00000369409 ADGRF5Q8IZF2 1346 aa23.54■■□□□ 1.36
PHGDH-202ENST00000369409 C11orf95C9JLR9 678 aaPredicted RBP23.53■■□□□ 1.36
PHGDH-202ENST00000369409 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
PHGDH-202ENST00000369409 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
PHGDH-202ENST00000369409 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
PHGDH-202ENST00000369409 ST20-MTHFSA0A0A6YYL1 179 aa23.49■■□□□ 1.35
PHGDH-202ENST00000369409 PIK3C2GO75747 1445 aa23.49■■□□□ 1.35
PHGDH-202ENST00000369409 C3P01024 1663 aa23.48■■□□□ 1.35
PHGDH-202ENST00000369409 SCAF11Q99590 1463 aaKnown RBP23.45■■□□□ 1.35
PHGDH-202ENST00000369409 SETBP1Q9Y6X0 1596 aa23.45■■□□□ 1.34
PHGDH-202ENST00000369409 CFAP70Q5T0N1 1121 aa23.45■■□□□ 1.34
PHGDH-202ENST00000369409 A2ML1A8K2U0 1454 aa23.42■■□□□ 1.34
PHGDH-202ENST00000369409 NUTM2DQ5VT03 806 aaPredicted RBP23.42■■□□□ 1.34
PHGDH-202ENST00000369409 TNRQ92752 1358 aa23.42■■□□□ 1.34
PHGDH-202ENST00000369409 STAG3Q9UJ98 1225 aa23.41■■□□□ 1.34
PHGDH-202ENST00000369409 ZFYVE9O95405 1425 aa23.4■■□□□ 1.34
PHGDH-202ENST00000369409 KDM5AP29375 1690 aaKnown RBP23.4■■□□□ 1.34
PHGDH-202ENST00000369409 VGFO15240 615 aaPredicted RBP23.39■■□□□ 1.34
PHGDH-202ENST00000369409 ADGRB1O14514 1584 aa23.39■■□□□ 1.33
PHGDH-202ENST00000369409 UBR1Q8IWV7 1749 aa23.39■■□□□ 1.33
PHGDH-202ENST00000369409 POLR3GLQ9BT43 218 aa23.39■■□□□ 1.33
PHGDH-202ENST00000369409 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
PHGDH-202ENST00000369409 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
PHGDH-202ENST00000369409 MYO3AQ8NEV4 1616 aa23.36■■□□□ 1.33
PHGDH-202ENST00000369409 TESK2Q96S53 571 aa23.36■■□□□ 1.33
PHGDH-202ENST00000369409 C14orf93Q9H972 538 aaKnown RBP23.35■■□□□ 1.33
PHGDH-202ENST00000369409 DISP3Q9P2K9 1392 aa23.34■■□□□ 1.33
PHGDH-202ENST00000369409 CEBPAP49715 358 aaPredicted RBP23.33■■□□□ 1.33
PHGDH-202ENST00000369409 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.32
PHGDH-202ENST00000369409 ANP32CO43423 234 aa23.32■■□□□ 1.32
PHGDH-202ENST00000369409 ASXL1Q8IXJ9 1541 aa23.32■■□□□ 1.32
PHGDH-202ENST00000369409 ADAMTSL3P82987 1691 aa23.31■■□□□ 1.32
PHGDH-202ENST00000369409 NLRP1Q9C000 1473 aa23.31■■□□□ 1.32
PHGDH-202ENST00000369409 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
PHGDH-202ENST00000369409 QRICH2Q9H0J4 1663 aa23.3■■□□□ 1.32
PHGDH-202ENST00000369409 PLPPR3Q6T4P5 718 aa23.28■■□□□ 1.32
PHGDH-202ENST00000369409 ALKQ9UM73 1620 aa23.28■■□□□ 1.32
PHGDH-202ENST00000369409 TMF1P82094 1093 aa23.28■■□□□ 1.32
PHGDH-202ENST00000369409 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
PHGDH-202ENST00000369409 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
PHGDH-202ENST00000369409 SETD1AO15047 1707 aaKnown RBP23.28■■□□□ 1.32
PHGDH-202ENST00000369409 NRXN3Q9Y4C0 1643 aa23.25■■□□□ 1.31
PHGDH-202ENST00000369409 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
PHGDH-202ENST00000369409 MYOM1P52179 1685 aa23.21■■□□□ 1.31
PHGDH-202ENST00000369409 TMEM2Q9UHN6 1383 aa23.21■■□□□ 1.31
PHGDH-202ENST00000369409 CENPJQ9HC77 1338 aaPredicted RBP23.2■■□□□ 1.3
PHGDH-202ENST00000369409 PTPRMP28827 1452 aa23.2■■□□□ 1.3
PHGDH-202ENST00000369409 SBNO2Q9Y2G9 1366 aa23.2■■□□□ 1.3
PHGDH-202ENST00000369409 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
PHGDH-202ENST00000369409 YTHDC1Q96MU7 727 aaKnown RBP23.19■■□□□ 1.3
PHGDH-202ENST00000369409 CEP170BQ9Y4F5 1589 aaPredicted RBP23.16■■□□□ 1.3
PHGDH-202ENST00000369409 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
PHGDH-202ENST00000369409 CCER2I3L3R5 266 aa23.15■■□□□ 1.3
PHGDH-202ENST00000369409 SLIT1O75093 1534 aa23.14■■□□□ 1.3
PHGDH-202ENST00000369409 ZNF142P52746 1687 aaPredicted RBP23.14■■□□□ 1.3
PHGDH-202ENST00000369409 CDCA8Q53HL2 280 aa23.14■■□□□ 1.29
PHGDH-202ENST00000369409 HDGFP51858 240 aaKnown RBP23.13■■□□□ 1.29
PHGDH-202ENST00000369409 PRKRIP1Q9H875 184 aaPredicted RBP23.13■■□□□ 1.29
PHGDH-202ENST00000369409 ARHGAP23Q9P227 1491 aa23.13■■□□□ 1.29
PHGDH-202ENST00000369409 STK26Q9P289 416 aa23.13■■□□□ 1.29
PHGDH-202ENST00000369409 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
PHGDH-202ENST00000369409 KNDC1Q76NI1 1749 aa23.09■■□□□ 1.29
PHGDH-202ENST00000369409 TULP4Q9NRJ4 1543 aa23.09■■□□□ 1.29
PHGDH-202ENST00000369409 DLC1Q96QB1 1528 aa23.08■■□□□ 1.29
PHGDH-202ENST00000369409 PLEKHG1Q9ULL1 1385 aa23.07■■□□□ 1.28
PHGDH-202ENST00000369409 LTKP29376 864 aa23.07■■□□□ 1.28
PHGDH-202ENST00000369409 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
PHGDH-202ENST00000369409 SETD1BQ9UPS6 1966 aaKnown RBP23.06■■□□□ 1.28
PHGDH-202ENST00000369409 LRPPRCP42704 1394 aaKnown RBP23.06■■□□□ 1.28
PHGDH-202ENST00000369409 ADAMTS13Q76LX8 1427 aa23.05■■□□□ 1.28
PHGDH-202ENST00000369409 METP08581 1390 aa23.05■■□□□ 1.28
PHGDH-202ENST00000369409 BCANQ96GW7 911 aa23.05■■□□□ 1.28
PHGDH-202ENST00000369409 PANK3Q9H999 370 aa23.05■■□□□ 1.28
PHGDH-202ENST00000369409 SAFB2Q14151 953 aaKnown RBP eCLIP23.05■■□□□ 1.28
PHGDH-202ENST00000369409 TXNDC2Q86VQ3 553 aa23.05■■□□□ 1.28
PHGDH-202ENST00000369409 THEMISQ8N1K5 641 aaPredicted RBP23.05■■□□□ 1.28
PHGDH-202ENST00000369409 EID1Q9Y6B2 187 aa23.04■■□□□ 1.28
PHGDH-202ENST00000369409 PRAM1Q96QH2 718 aa23.03■■□□□ 1.28
PHGDH-202ENST00000369409 CPS1P31327 1500 aa23.01■■□□□ 1.27
PHGDH-202ENST00000369409 PER1O15534 1290 aaPredicted RBP23.01■■□□□ 1.27
PHGDH-202ENST00000369409 POGKQ9P215 609 aa23■■□□□ 1.27
PHGDH-202ENST00000369409 ABCC11Q96J66 1382 aa23■■□□□ 1.27
PHGDH-202ENST00000369409 EVC2Q86UK5 1308 aa23■■□□□ 1.27
PHGDH-202ENST00000369409 CENPBP07199 599 aaPredicted RBP22.99■■□□□ 1.27
PHGDH-202ENST00000369409 MED14O60244 1454 aa22.99■■□□□ 1.27
PHGDH-202ENST00000369409 DIP2AQ14689 1571 aa22.99■■□□□ 1.27
PHGDH-202ENST00000369409 TECPR2O15040 1411 aa22.98■■□□□ 1.27
PHGDH-202ENST00000369409 KTN1Q86UP2 1357 aaKnown RBP22.98■■□□□ 1.27
PHGDH-202ENST00000369409 MINK1Q8N4C8 1332 aaPredicted RBP22.97■■□□□ 1.27
PHGDH-202ENST00000369409 PLEKHH1Q9ULM0 1364 aa22.96■■□□□ 1.27
PHGDH-202ENST00000369409 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
PHGDH-202ENST00000369409 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
PHGDH-202ENST00000369409 WAPLQ7Z5K2 1190 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms