RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
HMGCS2-201ENST00000369406 NEXMIFQ5QGS0 1516 aa19.85■□□□□ 0.77
HMGCS2-201ENST00000369406 ARID4BQ4LE39 1312 aaPredicted RBP19.85■□□□□ 0.77
HMGCS2-201ENST00000369406 CCDC7Q96M83 1385 aa19.85■□□□□ 0.77
HMGCS2-201ENST00000369406 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
HMGCS2-201ENST00000369406 KIF7Q2M1P5 1343 aa19.83■□□□□ 0.76
HMGCS2-201ENST00000369406 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
HMGCS2-201ENST00000369406 ZMYM3Q14202 1370 aa19.8■□□□□ 0.76
HMGCS2-201ENST00000369406 FER1L4A9Z1Z3 1794 aa19.8■□□□□ 0.76
HMGCS2-201ENST00000369406 NUTM2DQ5VT03 806 aaPredicted RBP19.8■□□□□ 0.76
HMGCS2-201ENST00000369406 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
HMGCS2-201ENST00000369406 PIK3C2GO75747 1445 aa19.78■□□□□ 0.76
HMGCS2-201ENST00000369406 C3P01024 1663 aa19.77■□□□□ 0.76
HMGCS2-201ENST00000369406 SLC52A1Q9NWF4 448 aa19.77■□□□□ 0.76
HMGCS2-201ENST00000369406 STAC3Q96MF2 364 aa19.74■□□□□ 0.75
HMGCS2-201ENST00000369406 ADGRB1O14514 1584 aa19.73■□□□□ 0.75
HMGCS2-201ENST00000369406 TESK2Q96S53 571 aa19.73■□□□□ 0.75
HMGCS2-201ENST00000369406 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
HMGCS2-201ENST00000369406 A2ML1A8K2U0 1454 aa19.72■□□□□ 0.75
HMGCS2-201ENST00000369406 RPGRIP1LQ68CZ1 1315 aa19.72■□□□□ 0.75
HMGCS2-201ENST00000369406 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
HMGCS2-201ENST00000369406 SCAF11Q99590 1463 aaKnown RBP19.71■□□□□ 0.75
HMGCS2-201ENST00000369406 DISP3Q9P2K9 1392 aa19.71■□□□□ 0.75
HMGCS2-201ENST00000369406 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
HMGCS2-201ENST00000369406 SETBP1Q9Y6X0 1596 aa19.7■□□□□ 0.74
HMGCS2-201ENST00000369406 ASXL1Q8IXJ9 1541 aa19.69■□□□□ 0.74
HMGCS2-201ENST00000369406 UBR1Q8IWV7 1749 aa19.69■□□□□ 0.74
HMGCS2-201ENST00000369406 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
HMGCS2-201ENST00000369406 C14orf93Q9H972 538 aaKnown RBP19.67■□□□□ 0.74
HMGCS2-201ENST00000369406 TNRQ92752 1358 aa19.67■□□□□ 0.74
HMGCS2-201ENST00000369406 ZFYVE9O95405 1425 aa19.66■□□□□ 0.74
HMGCS2-201ENST00000369406 RIMS1Q86UR5 1692 aaKnown RBP19.66■□□□□ 0.74
HMGCS2-201ENST00000369406 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
HMGCS2-201ENST00000369406 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
HMGCS2-201ENST00000369406 SETD1AO15047 1707 aaKnown RBP19.64■□□□□ 0.74
HMGCS2-201ENST00000369406 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
HMGCS2-201ENST00000369406 ARHGEF28Q8N1W1 1705 aaKnown RBP19.64■□□□□ 0.73
HMGCS2-201ENST00000369406 NRXN3Q9Y4C0 1643 aa19.63■□□□□ 0.73
HMGCS2-201ENST00000369406 KDM5AP29375 1690 aaKnown RBP19.62■□□□□ 0.73
HMGCS2-201ENST00000369406 ADAMTSL3P82987 1691 aa19.62■□□□□ 0.73
HMGCS2-201ENST00000369406 VGFO15240 615 aaPredicted RBP19.62■□□□□ 0.73
HMGCS2-201ENST00000369406 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
HMGCS2-201ENST00000369406 QRICH2Q9H0J4 1663 aa19.61■□□□□ 0.73
HMGCS2-201ENST00000369406 STAG3Q9UJ98 1225 aa19.61■□□□□ 0.73
HMGCS2-201ENST00000369406 ALKQ9UM73 1620 aa19.6■□□□□ 0.73
HMGCS2-201ENST00000369406 PTPRMP28827 1452 aa19.6■□□□□ 0.73
HMGCS2-201ENST00000369406 YTHDC1Q96MU7 727 aaKnown RBP19.6■□□□□ 0.73
HMGCS2-201ENST00000369406 MYOM1P52179 1685 aa19.59■□□□□ 0.73
HMGCS2-201ENST00000369406 ANP32CO43423 234 aa19.57■□□□□ 0.72
HMGCS2-201ENST00000369406 TRAK1Q9UPV9 953 aa19.57■□□□□ 0.72
HMGCS2-201ENST00000369406 EIF3AQ14152 1382 aaKnown RBP19.55■□□□□ 0.72
HMGCS2-201ENST00000369406 NLRP1Q9C000 1473 aa19.54■□□□□ 0.72
HMGCS2-201ENST00000369406 TMF1P82094 1093 aa19.53■□□□□ 0.72
HMGCS2-201ENST00000369406 TMEM2Q9UHN6 1383 aa19.52■□□□□ 0.71
HMGCS2-201ENST00000369406 PRKRIP1Q9H875 184 aaPredicted RBP19.5■□□□□ 0.71
HMGCS2-201ENST00000369406 CENPJQ9HC77 1338 aaPredicted RBP19.5■□□□□ 0.71
HMGCS2-201ENST00000369406 CNGB1Q14028 1251 aaPredicted RBP19.5■□□□□ 0.71
HMGCS2-201ENST00000369406 CCDC184Q52MB2 194 aa19.5■□□□□ 0.71
HMGCS2-201ENST00000369406 STK26Q9P289 416 aa19.49■□□□□ 0.71
HMGCS2-201ENST00000369406 YTHDC2Q9H6S0 1430 aaKnown RBP19.49■□□□□ 0.71
HMGCS2-201ENST00000369406 TULP4Q9NRJ4 1543 aa19.48■□□□□ 0.71
HMGCS2-201ENST00000369406 LTKP29376 864 aa19.47■□□□□ 0.71
HMGCS2-201ENST00000369406 SBNO2Q9Y2G9 1366 aa19.47■□□□□ 0.71
HMGCS2-201ENST00000369406 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
HMGCS2-201ENST00000369406 CEP170BQ9Y4F5 1589 aaPredicted RBP19.46■□□□□ 0.71
HMGCS2-201ENST00000369406 METP08581 1390 aa19.46■□□□□ 0.71
HMGCS2-201ENST00000369406 SLIT1O75093 1534 aa19.46■□□□□ 0.71
HMGCS2-201ENST00000369406 ARHGAP23Q9P227 1491 aa19.45■□□□□ 0.7
HMGCS2-201ENST00000369406 PER1O15534 1290 aaPredicted RBP19.45■□□□□ 0.7
HMGCS2-201ENST00000369406 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
HMGCS2-201ENST00000369406 ADAMTS13Q76LX8 1427 aa19.44■□□□□ 0.7
HMGCS2-201ENST00000369406 SAFB2Q14151 953 aaKnown RBP eCLIP19.44■□□□□ 0.7
HMGCS2-201ENST00000369406 PANK3Q9H999 370 aa19.44■□□□□ 0.7
HMGCS2-201ENST00000369406 ZNF142P52746 1687 aaPredicted RBP19.43■□□□□ 0.7
HMGCS2-201ENST00000369406 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.42■□□□□ 0.7
HMGCS2-201ENST00000369406 KNDC1Q76NI1 1749 aa19.41■□□□□ 0.7
HMGCS2-201ENST00000369406 PLEKHH1Q9ULM0 1364 aa19.4■□□□□ 0.7
HMGCS2-201ENST00000369406 PRAM1Q96QH2 718 aa19.4■□□□□ 0.7
HMGCS2-201ENST00000369406 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.69
HMGCS2-201ENST00000369406 DLC1Q96QB1 1528 aa19.39■□□□□ 0.69
HMGCS2-201ENST00000369406 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
HMGCS2-201ENST00000369406 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
HMGCS2-201ENST00000369406 MED14O60244 1454 aa19.38■□□□□ 0.69
HMGCS2-201ENST00000369406 TXNDC2Q86VQ3 553 aa19.37■□□□□ 0.69
HMGCS2-201ENST00000369406 WAPLQ7Z5K2 1190 aa19.36■□□□□ 0.69
HMGCS2-201ENST00000369406 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
HMGCS2-201ENST00000369406 MINK1Q8N4C8 1332 aaPredicted RBP19.35■□□□□ 0.69
HMGCS2-201ENST00000369406 CPS1P31327 1500 aa19.34■□□□□ 0.69
HMGCS2-201ENST00000369406 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
HMGCS2-201ENST00000369406 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
HMGCS2-201ENST00000369406 BCANQ96GW7 911 aa19.33■□□□□ 0.69
HMGCS2-201ENST00000369406 SLC26A8Q96RN1 970 aa19.33■□□□□ 0.69
HMGCS2-201ENST00000369406 PARD3Q8TEW0 1356 aa19.33■□□□□ 0.69
HMGCS2-201ENST00000369406 CABP2Q9NPB3 220 aa19.33■□□□□ 0.68
HMGCS2-201ENST00000369406 CC2D1BQ5T0F9 858 aaKnown RBP19.32■□□□□ 0.68
HMGCS2-201ENST00000369406 CARD14Q9BXL6 1004 aa19.32■□□□□ 0.68
HMGCS2-201ENST00000369406 HDGFP51858 240 aaKnown RBP19.32■□□□□ 0.68
HMGCS2-201ENST00000369406 THEMISQ8N1K5 641 aaPredicted RBP19.32■□□□□ 0.68
HMGCS2-201ENST00000369406 TECPR2O15040 1411 aa19.32■□□□□ 0.68
HMGCS2-201ENST00000369406 POGKQ9P215 609 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms