RNA–Protein interactions for RNA: ENST00000369234.4

GFRA1-202, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene GFRA1, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-202ENST00000369234 RPGRIP1LQ68CZ1 1315 aa33.78■■■■□ 3
GFRA1-202ENST00000369234 NUTM2DQ5VT03 806 aaPredicted RBP33.78■■■■□ 3
GFRA1-202ENST00000369234 NEXMIFQ5QGS0 1516 aa33.78■■■■□ 3
GFRA1-202ENST00000369234 PPLO60437 1756 aa33.78■■■■□ 3
GFRA1-202ENST00000369234 ROCK2O75116 1388 aaKnown RBP33.78■■■■□ 3
GFRA1-202ENST00000369234 CARD11Q9BXL7 1154 aa33.76■■■■□ 3
GFRA1-202ENST00000369234 A2ML1A8K2U0 1454 aa33.76■■■■□ 3
GFRA1-202ENST00000369234 NRXN1Q9ULB1 1477 aa33.73■■■□□ 2.99
GFRA1-202ENST00000369234 USP47Q96K76 1375 aa33.71■■■□□ 2.99
GFRA1-202ENST00000369234 GPRASP1Q5JY77 1395 aa33.69■■■□□ 2.98
GFRA1-202ENST00000369234 NLRP1Q9C000 1473 aa33.69■■■□□ 2.98
GFRA1-202ENST00000369234 PIK3C2GO75747 1445 aa33.65■■■□□ 2.98
GFRA1-202ENST00000369234 DIEXFQ68CQ4 756 aaKnown RBP33.65■■■□□ 2.98
GFRA1-202ENST00000369234 VGFO15240 615 aaPredicted RBP33.65■■■□□ 2.98
GFRA1-202ENST00000369234 CFAP70Q5T0N1 1121 aa33.65■■■□□ 2.98
GFRA1-202ENST00000369234 UBR1Q8IWV7 1749 aa33.64■■■□□ 2.98
GFRA1-202ENST00000369234 SENP3Q9H4L4 574 aaPredicted RBP33.63■■■□□ 2.97
GFRA1-202ENST00000369234 RIMS2Q9UQ26 1411 aa33.62■■■□□ 2.97
GFRA1-202ENST00000369234 PTPRMP28827 1452 aa33.61■■■□□ 2.97
GFRA1-202ENST00000369234 LAMC1P11047 1609 aa33.61■■■□□ 2.97
GFRA1-202ENST00000369234 MYO3AQ8NEV4 1616 aa33.61■■■□□ 2.97
GFRA1-202ENST00000369234 ZFYVE9O95405 1425 aa33.61■■■□□ 2.97
GFRA1-202ENST00000369234 KIAA1210Q9ULL0 1709 aa33.61■■■□□ 2.97
GFRA1-202ENST00000369234 KDM5AP29375 1690 aaKnown RBP33.59■■■□□ 2.97
GFRA1-202ENST00000369234 ST20-MTHFSA0A0A6YYL1 179 aa33.55■■■□□ 2.96
GFRA1-202ENST00000369234 C14orf93Q9H972 538 aaKnown RBP33.55■■■□□ 2.96
GFRA1-202ENST00000369234 TMEM2Q9UHN6 1383 aa33.54■■■□□ 2.96
GFRA1-202ENST00000369234 C11orf95C9JLR9 678 aaPredicted RBP33.53■■■□□ 2.96
GFRA1-202ENST00000369234 CEP170BQ9Y4F5 1589 aaPredicted RBP33.5■■■□□ 2.95
GFRA1-202ENST00000369234 WASHC2AQ641Q2 1341 aa33.49■■■□□ 2.95
GFRA1-202ENST00000369234 IQGAP1P46940 1657 aa33.48■■■□□ 2.95
GFRA1-202ENST00000369234 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.47■■■□□ 2.95
GFRA1-202ENST00000369234 SCAF11Q99590 1463 aaKnown RBP33.47■■■□□ 2.95
GFRA1-202ENST00000369234 KDM4FA0A1W2PPD8 638 aa33.46■■■□□ 2.95
GFRA1-202ENST00000369234 DDX10Q13206 875 aaKnown RBP33.46■■■□□ 2.95
GFRA1-202ENST00000369234 TMEM132EQ6IEE7 984 aa33.46■■■□□ 2.95
GFRA1-202ENST00000369234 ADGRB1O14514 1584 aa33.46■■■□□ 2.95
GFRA1-202ENST00000369234 SETBP1Q9Y6X0 1596 aa33.45■■■□□ 2.95
GFRA1-202ENST00000369234 LTKP29376 864 aa33.44■■■□□ 2.94
GFRA1-202ENST00000369234 THEMISQ8N1K5 641 aaPredicted RBP33.43■■■□□ 2.94
GFRA1-202ENST00000369234 ARHGAP23Q9P227 1491 aa33.42■■■□□ 2.94
GFRA1-202ENST00000369234 SLIT1O75093 1534 aa33.42■■■□□ 2.94
GFRA1-202ENST00000369234 HDGFP51858 240 aaKnown RBP33.41■■■□□ 2.94
GFRA1-202ENST00000369234 CCDC7Q96M83 1385 aa33.41■■■□□ 2.94
GFRA1-202ENST00000369234 ASXL1Q8IXJ9 1541 aa33.4■■■□□ 2.94
GFRA1-202ENST00000369234 ZNF142P52746 1687 aaPredicted RBP33.4■■■□□ 2.94
GFRA1-202ENST00000369234 ALKQ9UM73 1620 aa33.4■■■□□ 2.94
GFRA1-202ENST00000369234 KIF7Q2M1P5 1343 aa33.4■■■□□ 2.94
GFRA1-202ENST00000369234 TXNDC2Q86VQ3 553 aa33.39■■■□□ 2.94
GFRA1-202ENST00000369234 SETD1BQ9UPS6 1966 aaKnown RBP33.38■■■□□ 2.93
GFRA1-202ENST00000369234 NRXN3Q9Y4C0 1643 aa33.38■■■□□ 2.93
GFRA1-202ENST00000369234 TESK2Q96S53 571 aa33.37■■■□□ 2.93
GFRA1-202ENST00000369234 POLR1AO95602 1720 aaPredicted RBP33.35■■■□□ 2.93
GFRA1-202ENST00000369234 EID1Q9Y6B2 187 aa33.35■■■□□ 2.93
GFRA1-202ENST00000369234 TRAK1Q9UPV9 953 aa33.33■■■□□ 2.93
GFRA1-202ENST00000369234 EIF3AQ14152 1382 aaKnown RBP33.33■■■□□ 2.93
GFRA1-202ENST00000369234 PLEKHG1Q9ULL1 1385 aa33.31■■■□□ 2.92
GFRA1-202ENST00000369234 BCANQ96GW7 911 aa33.31■■■□□ 2.92
GFRA1-202ENST00000369234 SETD1AO15047 1707 aaKnown RBP33.31■■■□□ 2.92
GFRA1-202ENST00000369234 POLR3GLQ9BT43 218 aa33.28■■■□□ 2.92
GFRA1-202ENST00000369234 STK26Q9P289 416 aa33.28■■■□□ 2.92
GFRA1-202ENST00000369234 ADAMTS13Q76LX8 1427 aa33.27■■■□□ 2.92
GFRA1-202ENST00000369234 METP08581 1390 aa33.26■■■□□ 2.91
GFRA1-202ENST00000369234 DISP3Q9P2K9 1392 aa33.25■■■□□ 2.91
GFRA1-202ENST00000369234 YTHDC2Q9H6S0 1430 aaKnown RBP33.25■■■□□ 2.91
GFRA1-202ENST00000369234 MIER1Q8N108 512 aa33.22■■■□□ 2.91
GFRA1-202ENST00000369234 TMF1P82094 1093 aa33.21■■■□□ 2.91
GFRA1-202ENST00000369234 SLC26A8Q96RN1 970 aa33.21■■■□□ 2.91
GFRA1-202ENST00000369234 CENPJQ9HC77 1338 aaPredicted RBP33.2■■■□□ 2.91
GFRA1-202ENST00000369234 ARHGEF28Q8N1W1 1705 aaKnown RBP33.19■■■□□ 2.9
GFRA1-202ENST00000369234 ANKLE2Q86XL3 938 aa33.18■■■□□ 2.9
GFRA1-202ENST00000369234 MED14O60244 1454 aa33.18■■■□□ 2.9
GFRA1-202ENST00000369234 LRPPRCP42704 1394 aaKnown RBP33.16■■■□□ 2.9
GFRA1-202ENST00000369234 QRICH2Q9H0J4 1663 aa33.13■■■□□ 2.89
GFRA1-202ENST00000369234 SAFB2Q14151 953 aaKnown RBP eCLIP33.12■■■□□ 2.89
GFRA1-202ENST00000369234 SBNO2Q9Y2G9 1366 aa33.12■■■□□ 2.89
GFRA1-202ENST00000369234 PRAM1Q96QH2 718 aa33.1■■■□□ 2.89
GFRA1-202ENST00000369234 ABCC11Q96J66 1382 aa33.1■■■□□ 2.89
GFRA1-202ENST00000369234 TBX22Q9Y458 520 aa33.09■■■□□ 2.89
GFRA1-202ENST00000369234 NCKAP5LQ9HCH0 1330 aa33.08■■■□□ 2.89
GFRA1-202ENST00000369234 PTPRUQ92729 1446 aa33.07■■■□□ 2.88
GFRA1-202ENST00000369234 DLC1Q96QB1 1528 aa33.07■■■□□ 2.88
GFRA1-202ENST00000369234 SLC24A1O60721 1099 aa33.06■■■□□ 2.88
GFRA1-202ENST00000369234 HSPA2P54652 639 aa33.06■■■□□ 2.88
GFRA1-202ENST00000369234 PLEKHH1Q9ULM0 1364 aa33.05■■■□□ 2.88
GFRA1-202ENST00000369234 DIP2AQ14689 1571 aa33.05■■■□□ 2.88
GFRA1-202ENST00000369234 WAPLQ7Z5K2 1190 aa33.05■■■□□ 2.88
GFRA1-202ENST00000369234 POGKQ9P215 609 aa33.05■■■□□ 2.88
GFRA1-202ENST00000369234 CDCA8Q53HL2 280 aa33.03■■■□□ 2.88
GFRA1-202ENST00000369234 LMTK3Q96Q04 1460 aa33.03■■■□□ 2.88
GFRA1-202ENST00000369234 TECPR2O15040 1411 aa33.02■■■□□ 2.88
GFRA1-202ENST00000369234 NPHP4O75161 1426 aaPredicted RBP33.02■■■□□ 2.88
GFRA1-202ENST00000369234 KNDC1Q76NI1 1749 aa33■■■□□ 2.87
GFRA1-202ENST00000369234 ROBO2Q9HCK4 1378 aa32.99■■■□□ 2.87
GFRA1-202ENST00000369234 CPS1P31327 1500 aa32.99■■■□□ 2.87
GFRA1-202ENST00000369234 MINK1Q8N4C8 1332 aaPredicted RBP32.99■■■□□ 2.87
GFRA1-202ENST00000369234 TULP4Q9NRJ4 1543 aa32.97■■■□□ 2.87
GFRA1-202ENST00000369234 AMOTL2Q9Y2J4 779 aa32.97■■■□□ 2.87
GFRA1-202ENST00000369234 ANP32CO43423 234 aa32.96■■■□□ 2.87
GFRA1-202ENST00000369234 FAM135BQ49AJ0 1406 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms