RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 HIRIP3Q9BW71 556 aaPredicted RBP33.76■■■■□ 3
SNX3-203ENST00000368979 ADAMTSL3P82987 1691 aa33.74■■■□□ 2.99
SNX3-203ENST00000368979 TNRQ92752 1358 aa33.73■■■□□ 2.99
SNX3-203ENST00000368979 USP47Q96K76 1375 aa33.73■■■□□ 2.99
SNX3-203ENST00000368979 CARD11Q9BXL7 1154 aa33.73■■■□□ 2.99
SNX3-203ENST00000368979 ADGRF5Q8IZF2 1346 aa33.71■■■□□ 2.99
SNX3-203ENST00000368979 A2ML1A8K2U0 1454 aa33.69■■■□□ 2.98
SNX3-203ENST00000368979 KDM5AP29375 1690 aaKnown RBP33.69■■■□□ 2.98
SNX3-203ENST00000368979 NBPF1Q3BBV0 1214 aa33.69■■■□□ 2.98
SNX3-203ENST00000368979 DIEXFQ68CQ4 756 aaKnown RBP33.69■■■□□ 2.98
SNX3-203ENST00000368979 RIMS1Q86UR5 1692 aaKnown RBP33.67■■■□□ 2.98
SNX3-203ENST00000368979 PIK3C2GO75747 1445 aa33.67■■■□□ 2.98
SNX3-203ENST00000368979 ZFYVE9O95405 1425 aa33.66■■■□□ 2.98
SNX3-203ENST00000368979 CEBPAP49715 358 aaPredicted RBP33.63■■■□□ 2.97
SNX3-203ENST00000368979 NLRP1Q9C000 1473 aa33.62■■■□□ 2.97
SNX3-203ENST00000368979 IQGAP1P46940 1657 aa33.61■■■□□ 2.97
SNX3-203ENST00000368979 UBR1Q8IWV7 1749 aa33.6■■■□□ 2.97
SNX3-203ENST00000368979 VGFO15240 615 aaPredicted RBP33.59■■■□□ 2.97
SNX3-203ENST00000368979 STAG3Q9UJ98 1225 aa33.59■■■□□ 2.97
SNX3-203ENST00000368979 POLR1AO95602 1720 aaPredicted RBP33.58■■■□□ 2.97
SNX3-203ENST00000368979 SETBP1Q9Y6X0 1596 aa33.58■■■□□ 2.97
SNX3-203ENST00000368979 CFAP70Q5T0N1 1121 aa33.55■■■□□ 2.96
SNX3-203ENST00000368979 KDM4FA0A1W2PPD8 638 aa33.53■■■□□ 2.96
SNX3-203ENST00000368979 MYO3AQ8NEV4 1616 aa33.53■■■□□ 2.96
SNX3-203ENST00000368979 RIMS2Q9UQ26 1411 aa33.52■■■□□ 2.96
SNX3-203ENST00000368979 SCAF11Q99590 1463 aaKnown RBP33.52■■■□□ 2.96
SNX3-203ENST00000368979 C14orf93Q9H972 538 aaKnown RBP33.52■■■□□ 2.96
SNX3-203ENST00000368979 ADGRB1O14514 1584 aa33.5■■■□□ 2.95
SNX3-203ENST00000368979 NUTM2DQ5VT03 806 aaPredicted RBP33.5■■■□□ 2.95
SNX3-203ENST00000368979 WASHC2AQ641Q2 1341 aa33.49■■■□□ 2.95
SNX3-203ENST00000368979 ST20-MTHFSA0A0A6YYL1 179 aa33.48■■■□□ 2.95
SNX3-203ENST00000368979 C11orf95C9JLR9 678 aaPredicted RBP33.47■■■□□ 2.95
SNX3-203ENST00000368979 CCDC7Q96M83 1385 aa33.46■■■□□ 2.95
SNX3-203ENST00000368979 PLPPR3Q6T4P5 718 aa33.43■■■□□ 2.94
SNX3-203ENST00000368979 TMEM2Q9UHN6 1383 aa33.43■■■□□ 2.94
SNX3-203ENST00000368979 DDX10Q13206 875 aaKnown RBP33.41■■■□□ 2.94
SNX3-203ENST00000368979 KIF7Q2M1P5 1343 aa33.4■■■□□ 2.94
SNX3-203ENST00000368979 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.4■■■□□ 2.94
SNX3-203ENST00000368979 ASXL1Q8IXJ9 1541 aa33.39■■■□□ 2.94
SNX3-203ENST00000368979 EIF3AQ14152 1382 aaKnown RBP33.39■■■□□ 2.94
SNX3-203ENST00000368979 ALKQ9UM73 1620 aa33.38■■■□□ 2.93
SNX3-203ENST00000368979 CEP170BQ9Y4F5 1589 aaPredicted RBP33.38■■■□□ 2.93
SNX3-203ENST00000368979 SLIT1O75093 1534 aa33.37■■■□□ 2.93
SNX3-203ENST00000368979 ZNF142P52746 1687 aaPredicted RBP33.37■■■□□ 2.93
SNX3-203ENST00000368979 NRXN3Q9Y4C0 1643 aa33.36■■■□□ 2.93
SNX3-203ENST00000368979 PTPRMP28827 1452 aa33.36■■■□□ 2.93
SNX3-203ENST00000368979 ARHGAP23Q9P227 1491 aa33.36■■■□□ 2.93
SNX3-203ENST00000368979 TESK2Q96S53 571 aa33.36■■■□□ 2.93
SNX3-203ENST00000368979 SETD1AO15047 1707 aaKnown RBP33.35■■■□□ 2.93
SNX3-203ENST00000368979 HDGFP51858 240 aaKnown RBP33.34■■■□□ 2.93
SNX3-203ENST00000368979 TMEM132EQ6IEE7 984 aa33.3■■■□□ 2.92
SNX3-203ENST00000368979 ARHGEF28Q8N1W1 1705 aaKnown RBP33.28■■■□□ 2.92
SNX3-203ENST00000368979 THEMISQ8N1K5 641 aaPredicted RBP33.26■■■□□ 2.91
SNX3-203ENST00000368979 DISP3Q9P2K9 1392 aa33.24■■■□□ 2.91
SNX3-203ENST00000368979 SETD1BQ9UPS6 1966 aaKnown RBP33.24■■■□□ 2.91
SNX3-203ENST00000368979 PLEKHG1Q9ULL1 1385 aa33.24■■■□□ 2.91
SNX3-203ENST00000368979 SBNO2Q9Y2G9 1366 aa33.22■■■□□ 2.91
SNX3-203ENST00000368979 LTKP29376 864 aa33.22■■■□□ 2.91
SNX3-203ENST00000368979 SENP3Q9H4L4 574 aaPredicted RBP33.22■■■□□ 2.91
SNX3-203ENST00000368979 TRAK1Q9UPV9 953 aa33.22■■■□□ 2.91
SNX3-203ENST00000368979 YTHDC2Q9H6S0 1430 aaKnown RBP33.21■■■□□ 2.91
SNX3-203ENST00000368979 TMF1P82094 1093 aa33.21■■■□□ 2.91
SNX3-203ENST00000368979 MIER1Q8N108 512 aa33.21■■■□□ 2.91
SNX3-203ENST00000368979 QRICH2Q9H0J4 1663 aa33.21■■■□□ 2.91
SNX3-203ENST00000368979 TXNDC2Q86VQ3 553 aa33.18■■■□□ 2.9
SNX3-203ENST00000368979 CENPJQ9HC77 1338 aaPredicted RBP33.18■■■□□ 2.9
SNX3-203ENST00000368979 ADAMTS13Q76LX8 1427 aa33.18■■■□□ 2.9
SNX3-203ENST00000368979 EID1Q9Y6B2 187 aa33.18■■■□□ 2.9
SNX3-203ENST00000368979 SLC24A1O60721 1099 aa33.14■■■□□ 2.9
SNX3-203ENST00000368979 DLC1Q96QB1 1528 aa33.14■■■□□ 2.9
SNX3-203ENST00000368979 MED14O60244 1454 aa33.14■■■□□ 2.9
SNX3-203ENST00000368979 POLR3GLQ9BT43 218 aa33.13■■■□□ 2.89
SNX3-203ENST00000368979 LRPPRCP42704 1394 aaKnown RBP33.13■■■□□ 2.89
SNX3-203ENST00000368979 METP08581 1390 aa33.11■■■□□ 2.89
SNX3-203ENST00000368979 KNDC1Q76NI1 1749 aa33.11■■■□□ 2.89
SNX3-203ENST00000368979 DIP2AQ14689 1571 aa33.09■■■□□ 2.89
SNX3-203ENST00000368979 STK26Q9P289 416 aa33.08■■■□□ 2.89
SNX3-203ENST00000368979 ABCC11Q96J66 1382 aa33.07■■■□□ 2.88
SNX3-203ENST00000368979 CDCA8Q53HL2 280 aa33.07■■■□□ 2.88
SNX3-203ENST00000368979 BCANQ96GW7 911 aa33.05■■■□□ 2.88
SNX3-203ENST00000368979 TECPR2O15040 1411 aa33.04■■■□□ 2.88
SNX3-203ENST00000368979 CPS1P31327 1500 aa33.03■■■□□ 2.88
SNX3-203ENST00000368979 MYOM1P52179 1685 aa33.02■■■□□ 2.88
SNX3-203ENST00000368979 TULP4Q9NRJ4 1543 aa33■■■□□ 2.87
SNX3-203ENST00000368979 ANP32CO43423 234 aa32.99■■■□□ 2.87
SNX3-203ENST00000368979 PRAM1Q96QH2 718 aa32.98■■■□□ 2.87
SNX3-203ENST00000368979 TBX22Q9Y458 520 aa32.98■■■□□ 2.87
SNX3-203ENST00000368979 ANKLE2Q86XL3 938 aa32.97■■■□□ 2.87
SNX3-203ENST00000368979 FAM135BQ49AJ0 1406 aa32.95■■■□□ 2.87
SNX3-203ENST00000368979 SLC26A8Q96RN1 970 aa32.95■■■□□ 2.87
SNX3-203ENST00000368979 SIRT1Q96EB6 747 aa32.94■■■□□ 2.86
SNX3-203ENST00000368979 POGKQ9P215 609 aa32.94■■■□□ 2.86
SNX3-203ENST00000368979 PTPRUQ92729 1446 aa32.93■■■□□ 2.86
SNX3-203ENST00000368979 PLEKHH1Q9ULM0 1364 aa32.91■■■□□ 2.86
SNX3-203ENST00000368979 SAFB2Q14151 953 aaKnown RBP eCLIP32.91■■■□□ 2.86
SNX3-203ENST00000368979 EVC2Q86UK5 1308 aa32.9■■■□□ 2.86
SNX3-203ENST00000368979 PUS7Q96PZ0 661 aaKnown RBP32.9■■■□□ 2.86
SNX3-203ENST00000368979 XRN1Q8IZH2 1706 aaKnown RBP32.89■■■□□ 2.86
SNX3-203ENST00000368979 PIK3R4Q99570 1358 aa32.88■■■□□ 2.85
SNX3-203ENST00000368979 WAPLQ7Z5K2 1190 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms