RNA–Protein interactions for RNA: ENST00000368974.7

LINC00222-201, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best)

Gene LINC00222, Length 1,117 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-201ENST00000368974 ROCK1Q13464 1354 aa14.43□□□□□ -0.1
LINC00222-201ENST00000368974 PPARGC1BQ86YN6 1023 aaKnown RBP14.41□□□□□ -0.1
LINC00222-201ENST00000368974 RPRD2Q5VT52 1461 aaKnown RBP14.38□□□□□ -0.11
LINC00222-201ENST00000368974 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
LINC00222-201ENST00000368974 EFCAB6Q5THR3 1501 aa14.38□□□□□ -0.11
LINC00222-201ENST00000368974 ITGAEP38570 1179 aa14.38□□□□□ -0.11
LINC00222-201ENST00000368974 FAM135BQ49AJ0 1406 aa14.38□□□□□ -0.11
LINC00222-201ENST00000368974 HDGFP51858 240 aaKnown RBP14.36□□□□□ -0.11
LINC00222-201ENST00000368974 POTEAQ6S8J7 498 aa14.36□□□□□ -0.11
LINC00222-201ENST00000368974 SLC26A8Q96RN1 970 aa14.36□□□□□ -0.11
LINC00222-201ENST00000368974 KCNA6P17658 529 aa14.35□□□□□ -0.11
LINC00222-201ENST00000368974 TET3O43151 1660 aa14.35□□□□□ -0.11
LINC00222-201ENST00000368974 NUP155O75694 1391 aa14.34□□□□□ -0.11
LINC00222-201ENST00000368974 KDM5AP29375 1690 aaKnown RBP14.33□□□□□ -0.11
LINC00222-201ENST00000368974 ROBO1Q9Y6N7 1651 aa14.33□□□□□ -0.11
LINC00222-201ENST00000368974 TMEM94Q12767 1356 aa14.33□□□□□ -0.12
LINC00222-201ENST00000368974 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC00222-201ENST00000368974 BCANQ96GW7 911 aa14.31□□□□□ -0.12
LINC00222-201ENST00000368974 ADGRB3O60242 1522 aa14.31□□□□□ -0.12
LINC00222-201ENST00000368974 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
LINC00222-201ENST00000368974 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
LINC00222-201ENST00000368974 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
LINC00222-201ENST00000368974 ZFYVE9O95405 1425 aa14.3□□□□□ -0.12
LINC00222-201ENST00000368974 PPP1R15AO75807 674 aaPredicted RBP14.29□□□□□ -0.12
LINC00222-201ENST00000368974 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
LINC00222-201ENST00000368974 TBX22Q9Y458 520 aa14.29□□□□□ -0.12
LINC00222-201ENST00000368974 PLEKHG1Q9ULL1 1385 aa14.29□□□□□ -0.12
LINC00222-201ENST00000368974 RRBP1Q9P2E9 1410 aaKnown RBP14.29□□□□□ -0.12
LINC00222-201ENST00000368974 RIMS2Q9UQ26 1411 aa14.29□□□□□ -0.12
LINC00222-201ENST00000368974 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
LINC00222-201ENST00000368974 UNC13BO14795 1591 aa14.28□□□□□ -0.12
LINC00222-201ENST00000368974 SETD1AO15047 1707 aaKnown RBP14.27□□□□□ -0.12
LINC00222-201ENST00000368974 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
LINC00222-201ENST00000368974 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
LINC00222-201ENST00000368974 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
LINC00222-201ENST00000368974 NUTM2DQ5VT03 806 aaPredicted RBP14.24□□□□□ -0.13
LINC00222-201ENST00000368974 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
LINC00222-201ENST00000368974 NAIPQ13075 1403 aa14.23□□□□□ -0.13
LINC00222-201ENST00000368974 TMEM131LA2VDJ0 1609 aa14.23□□□□□ -0.13
LINC00222-201ENST00000368974 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
LINC00222-201ENST00000368974 SLAIN2Q9P270 581 aa14.21□□□□□ -0.13
LINC00222-201ENST00000368974 COL16A1Q07092 1604 aaPredicted RBP14.21□□□□□ -0.13
LINC00222-201ENST00000368974 ADAMTS13Q76LX8 1427 aa14.21□□□□□ -0.13
LINC00222-201ENST00000368974 PIK3R4Q99570 1358 aa14.21□□□□□ -0.14
LINC00222-201ENST00000368974 ZBTB22O15209 634 aa14.2□□□□□ -0.14
LINC00222-201ENST00000368974 MSH6P52701 1360 aa14.2□□□□□ -0.14
LINC00222-201ENST00000368974 E9PCH4 1651 aa14.2□□□□□ -0.14
LINC00222-201ENST00000368974 GCC2Q8IWJ2 1684 aa14.2□□□□□ -0.14
LINC00222-201ENST00000368974 NCOA3Q9Y6Q9 1424 aa14.19□□□□□ -0.14
LINC00222-201ENST00000368974 JCADQ9P266 1359 aa14.19□□□□□ -0.14
LINC00222-201ENST00000368974 LRP6O75581 1613 aa14.19□□□□□ -0.14
LINC00222-201ENST00000368974 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
LINC00222-201ENST00000368974 SRCAPQ6ZRS2 3230 aa14.17□□□□□ -0.14
LINC00222-201ENST00000368974 TRIM52Q96A61 297 aa14.17□□□□□ -0.14
LINC00222-201ENST00000368974 AMOTL2Q9Y2J4 779 aa14.17□□□□□ -0.14
LINC00222-201ENST00000368974 HFM1A2PYH4 1435 aa14.16□□□□□ -0.14
LINC00222-201ENST00000368974 C19orf44Q9H6X5 657 aa14.16□□□□□ -0.14
LINC00222-201ENST00000368974 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
LINC00222-201ENST00000368974 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
LINC00222-201ENST00000368974 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
LINC00222-201ENST00000368974 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.14□□□□□ -0.15
LINC00222-201ENST00000368974 AHDC1Q5TGY3 1603 aaPredicted RBP14.13□□□□□ -0.15
LINC00222-201ENST00000368974 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.15
LINC00222-201ENST00000368974 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
LINC00222-201ENST00000368974 ATF3P18847 181 aa14.12□□□□□ -0.15
LINC00222-201ENST00000368974 PTPRUQ92729 1446 aa14.12□□□□□ -0.15
LINC00222-201ENST00000368974 VGFO15240 615 aaPredicted RBP14.11□□□□□ -0.15
LINC00222-201ENST00000368974 DIP2AQ14689 1571 aa14.11□□□□□ -0.15
LINC00222-201ENST00000368974 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
LINC00222-201ENST00000368974 METP08581 1390 aa14.1□□□□□ -0.15
LINC00222-201ENST00000368974 RPGRIP1LQ68CZ1 1315 aa14.1□□□□□ -0.15
LINC00222-201ENST00000368974 TRPM2O94759 1503 aa14.09□□□□□ -0.15
LINC00222-201ENST00000368974 SETBP1Q9Y6X0 1596 aa14.07□□□□□ -0.16
LINC00222-201ENST00000368974 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
LINC00222-201ENST00000368974 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
LINC00222-201ENST00000368974 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
LINC00222-201ENST00000368974 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
LINC00222-201ENST00000368974 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
LINC00222-201ENST00000368974 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
LINC00222-201ENST00000368974 SPHKAPQ2M3C7 1700 aa14.04□□□□□ -0.16
LINC00222-201ENST00000368974 DCCP43146 1447 aa14.04□□□□□ -0.16
LINC00222-201ENST00000368974 NEXMIFQ5QGS0 1516 aa14.04□□□□□ -0.16
LINC00222-201ENST00000368974 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
LINC00222-201ENST00000368974 CDK12Q9NYV4 1490 aaPredicted RBP14.03□□□□□ -0.16
LINC00222-201ENST00000368974 XRN1Q8IZH2 1706 aaKnown RBP14.03□□□□□ -0.16
LINC00222-201ENST00000368974 NHSL1Q5SYE7 1610 aa14.02□□□□□ -0.16
LINC00222-201ENST00000368974 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
LINC00222-201ENST00000368974 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
LINC00222-201ENST00000368974 RXRBP28702 533 aa14.01□□□□□ -0.17
LINC00222-201ENST00000368974 MST1RQ04912 1400 aa14□□□□□ -0.17
LINC00222-201ENST00000368974 EP400Q96L91 3159 aa13.99□□□□□ -0.17
LINC00222-201ENST00000368974 AFF2P51816 1311 aa13.99□□□□□ -0.17
LINC00222-201ENST00000368974 NUTM2BA6NNL0 878 aaPredicted RBP13.99□□□□□ -0.17
LINC00222-201ENST00000368974 NUTM2EB1AL46 878 aaPredicted RBP13.99□□□□□ -0.17
LINC00222-201ENST00000368974 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
LINC00222-201ENST00000368974 NUTM2AQ8IVF1 878 aaPredicted RBP13.99□□□□□ -0.17
LINC00222-201ENST00000368974 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
LINC00222-201ENST00000368974 ADGRL3Q9HAR2 1447 aa13.98□□□□□ -0.17
LINC00222-201ENST00000368974 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
LINC00222-201ENST00000368974 RGS12O14924 1447 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms