RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 HDAC5Q9UQL6 1122 aa22.27■■□□□ 1.16
SNX27-202ENST00000368841 AMOTL1Q8IY63 956 aa22.27■■□□□ 1.15
SNX27-202ENST00000368841 HMOX1P09601 288 aa22.26■■□□□ 1.15
SNX27-202ENST00000368841 IFIT2P09913 472 aaKnown RBP22.26■■□□□ 1.15
SNX27-202ENST00000368841 DDX11L8A8MPP1 907 aa22.25■■□□□ 1.15
SNX27-202ENST00000368841 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
SNX27-202ENST00000368841 KIF3AQ9Y496 699 aa22.25■■□□□ 1.15
SNX27-202ENST00000368841 MYBBP1AQ9BQG0 1328 aaKnown RBP22.23■■□□□ 1.15
SNX27-202ENST00000368841 PDE4AP27815 886 aa22.23■■□□□ 1.15
SNX27-202ENST00000368841 PSME1Q06323 249 aa22.23■■□□□ 1.15
SNX27-202ENST00000368841 CCDC27Q2M243 656 aa22.23■■□□□ 1.15
SNX27-202ENST00000368841 CCDC88BA6NC98 1476 aa22.23■■□□□ 1.15
SNX27-202ENST00000368841 ZKSCAN2Q63HK3 967 aa22.23■■□□□ 1.15
SNX27-202ENST00000368841 BICD2Q8TD16 824 aa22.23■■□□□ 1.15
SNX27-202ENST00000368841 NEXNQ0ZGT2 675 aa22.22■■□□□ 1.15
SNX27-202ENST00000368841 FMN1Q68DA7 1419 aa22.22■■□□□ 1.15
SNX27-202ENST00000368841 APAF1O14727 1248 aa22.22■■□□□ 1.15
SNX27-202ENST00000368841 NAP1L1P55209 391 aaKnown RBP22.22■■□□□ 1.15
SNX27-202ENST00000368841 BAZ1AQ9NRL2 1556 aaPredicted RBP22.21■■□□□ 1.15
SNX27-202ENST00000368841 VPS37CA5D8V6 355 aaPredicted RBP22.21■■□□□ 1.15
SNX27-202ENST00000368841 CHMP4AQ9BY43 222 aa22.21■■□□□ 1.15
SNX27-202ENST00000368841 TPM1P09493 284 aa22.21■■□□□ 1.15
SNX27-202ENST00000368841 NACADO15069 1562 aa22.21■■□□□ 1.15
SNX27-202ENST00000368841 FAM161AQ3B820 660 aa22.2■■□□□ 1.15
SNX27-202ENST00000368841 TIMELESSQ9UNS1 1208 aa22.2■■□□□ 1.15
SNX27-202ENST00000368841 CPLX1O14810 134 aa22.2■■□□□ 1.14
SNX27-202ENST00000368841 ZNF771Q7L3S4 317 aaPredicted RBP22.2■■□□□ 1.14
SNX27-202ENST00000368841 RIPK4P57078 832 aa22.2■■□□□ 1.14
SNX27-202ENST00000368841 RRP1P56182 461 aaKnown RBP22.19■■□□□ 1.14
SNX27-202ENST00000368841 HSP90AA2PQ14568 343 aaPredicted RBP22.19■■□□□ 1.14
SNX27-202ENST00000368841 FKBP5Q13451 457 aaPredicted RBP22.19■■□□□ 1.14
SNX27-202ENST00000368841 CENPQQ7L2Z9 268 aaPredicted RBP22.19■■□□□ 1.14
SNX27-202ENST00000368841 STK11IPQ8N1F8 1099 aa22.19■■□□□ 1.14
SNX27-202ENST00000368841 NEUROD6Q96NK8 337 aa22.19■■□□□ 1.14
SNX27-202ENST00000368841 SETQ01105 290 aaPredicted RBP22.18■■□□□ 1.14
SNX27-202ENST00000368841 CGNL1Q0VF96 1302 aa22.18■■□□□ 1.14
SNX27-202ENST00000368841 SKIDA1Q1XH10 827 aa22.18■■□□□ 1.14
SNX27-202ENST00000368841 HOMER1Q86YM7 354 aa22.17■■□□□ 1.14
SNX27-202ENST00000368841 TTLL5Q6EMB2 1281 aa22.17■■□□□ 1.14
SNX27-202ENST00000368841 CYB5RLQ6IPT4 315 aa22.17■■□□□ 1.14
SNX27-202ENST00000368841 CCDC43Q96MW1 224 aaKnown RBP22.17■■□□□ 1.14
SNX27-202ENST00000368841 CCDC144AA2RUR9 1427 aa22.16■■□□□ 1.14
SNX27-202ENST00000368841 USP35Q9P2H5 1018 aa22.16■■□□□ 1.14
SNX27-202ENST00000368841 EVC2Q86UK5 1308 aa22.15■■□□□ 1.14
SNX27-202ENST00000368841 RBM33Q96EV2 1170 aaKnown RBP22.14■■□□□ 1.13
SNX27-202ENST00000368841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.14■■□□□ 1.136e-14■■■■■ 335.4
SNX27-202ENST00000368841 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
SNX27-202ENST00000368841 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.13■■□□□ 1.13
SNX27-202ENST00000368841 ERICH2A1L162 156 aa22.13■■□□□ 1.13
SNX27-202ENST00000368841 WASHC4Q2M389 1173 aa22.13■■□□□ 1.13
SNX27-202ENST00000368841 G3BP1Q13283 466 aaKnown RBP eCLIP22.13■■□□□ 1.13
SNX27-202ENST00000368841 TSPYL4Q9UJ04 414 aa22.13■■□□□ 1.13
SNX27-202ENST00000368841 CCDC70Q6NSX1 233 aa22.12■■□□□ 1.13
SNX27-202ENST00000368841 PPP1R1BQ9UD71 204 aaPredicted RBP22.12■■□□□ 1.13
SNX27-202ENST00000368841 E9PSI1 815 aa22.12■■□□□ 1.13
SNX27-202ENST00000368841 DIAPH1O60610 1272 aaKnown RBP22.12■■□□□ 1.13
SNX27-202ENST00000368841 TRDNQ13061 729 aa22.11■■□□□ 1.13
SNX27-202ENST00000368841 RIC3Q7Z5B4 369 aa22.11■■□□□ 1.13
SNX27-202ENST00000368841 LNPKQ9C0E8 428 aa22.11■■□□□ 1.13
SNX27-202ENST00000368841 ZKSCAN1P17029 563 aaPredicted RBP22.1■■□□□ 1.13
SNX27-202ENST00000368841 ZFYVE27Q5T4F4 411 aa22.09■■□□□ 1.13
SNX27-202ENST00000368841 RUFY2Q8WXA3 655 aa22.09■■□□□ 1.13
SNX27-202ENST00000368841 FAM13BQ9NYF5 915 aa22.09■■□□□ 1.13
SNX27-202ENST00000368841 IKQ13123 557 aaPredicted RBP22.09■■□□□ 1.13
SNX27-202ENST00000368841 GSE1Q14687 1217 aa22.09■■□□□ 1.13
SNX27-202ENST00000368841 PDILTQ8N807 584 aa22.09■■□□□ 1.13
SNX27-202ENST00000368841 ATP6V1DQ9Y5K8 247 aa22.08■■□□□ 1.13
SNX27-202ENST00000368841 CCDC18Q5T9S5 1454 aa22.08■■□□□ 1.12
SNX27-202ENST00000368841 PDE3BQ13370 1112 aa22.07■■□□□ 1.12
SNX27-202ENST00000368841 VSIG10Q8N0Z9 540 aa22.07■■□□□ 1.12
SNX27-202ENST00000368841 CPLX2Q6PUV4 134 aaKnown RBP22.07■■□□□ 1.12
SNX27-202ENST00000368841 CCDC47Q96A33 483 aaKnown RBP22.07■■□□□ 1.12
SNX27-202ENST00000368841 SMC3Q9UQE7 1217 aa22.06■■□□□ 1.12
SNX27-202ENST00000368841 CT47A1Q5JQC4 288 aaPredicted RBP22.06■■□□□ 1.12
SNX27-202ENST00000368841 PANK1Q8TE04 598 aa22.06■■□□□ 1.12
SNX27-202ENST00000368841 CABP2Q9NPB3 220 aa22.06■■□□□ 1.12
SNX27-202ENST00000368841 USP47Q96K76 1375 aa22.05■■□□□ 1.12
SNX27-202ENST00000368841 PHLDB1Q86UU1 1377 aa22.05■■□□□ 1.12
SNX27-202ENST00000368841 DZIP1LQ8IYY4 767 aaKnown RBP22.05■■□□□ 1.12
SNX27-202ENST00000368841 IPO7O95373 1038 aaKnown RBP22.05■■□□□ 1.12
SNX27-202ENST00000368841 SASS6Q6UVJ0 657 aa22.05■■□□□ 1.12
SNX27-202ENST00000368841 DNAJC2Q99543 621 aaKnown RBP22.05■■□□□ 1.12
SNX27-202ENST00000368841 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
SNX27-202ENST00000368841 DDX58O95786 925 aaKnown RBP22.03■■□□□ 1.12
SNX27-202ENST00000368841 ATP2B1P20020 1258 aa22.03■■□□□ 1.12
SNX27-202ENST00000368841 ANKRD20A12PQ8NF67 263 aa22.03■■□□□ 1.12
SNX27-202ENST00000368841 GGNBP2Q9H3C7 697 aa22.03■■□□□ 1.12
SNX27-202ENST00000368841 IFT57Q9NWB7 429 aa22.03■■□□□ 1.12
SNX27-202ENST00000368841 NLRP2Q9NX02 1062 aa22.03■■□□□ 1.12
SNX27-202ENST00000368841 CHMP4CQ96CF2 233 aa22.03■■□□□ 1.12
SNX27-202ENST00000368841 EPS15P42566 896 aa22.02■■□□□ 1.12
SNX27-202ENST00000368841 WIZO95785 1651 aa22.02■■□□□ 1.12
SNX27-202ENST00000368841 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
SNX27-202ENST00000368841 LRRFIP1Q32MZ4 808 aaKnown RBP22.02■■□□□ 1.12
SNX27-202ENST00000368841 TMEM132AQ24JP5 1023 aa22.02■■□□□ 1.12
SNX27-202ENST00000368841 C1orf115Q9H7X2 142 aa22.02■■□□□ 1.12
SNX27-202ENST00000368841 ODF2Q5BJF6 829 aa22.01■■□□□ 1.11
SNX27-202ENST00000368841 REC8O95072 547 aa22.01■■□□□ 1.11
SNX27-202ENST00000368841 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
SNX27-202ENST00000368841 DDX19BQ9UMR2 479 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms