RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 MAP3K4Q9Y6R4 1608 aa20.2■□□□□ 0.83
C1orf43-206ENST00000368521 NLRP13Q86W25 1043 aa20.19■□□□□ 0.82
C1orf43-206ENST00000368521 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
C1orf43-206ENST00000368521 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
C1orf43-206ENST00000368521 ADGRB3O60242 1522 aa20.17■□□□□ 0.82
C1orf43-206ENST00000368521 ABCA6Q8N139 1617 aa20.16■□□□□ 0.82
C1orf43-206ENST00000368521 NPATQ14207 1427 aa20.14■□□□□ 0.82
C1orf43-206ENST00000368521 RPGRIP1LQ68CZ1 1315 aa20.14■□□□□ 0.82
C1orf43-206ENST00000368521 SYNMO15061 1565 aa20.14■□□□□ 0.81
C1orf43-206ENST00000368521 ABCC3O15438 1527 aa20.14■□□□□ 0.81
C1orf43-206ENST00000368521 ARHGAP31Q2M1Z3 1444 aa20.14■□□□□ 0.81
C1orf43-206ENST00000368521 SETBP1Q9Y6X0 1596 aa20.13■□□□□ 0.81
C1orf43-206ENST00000368521 SBNO2Q9Y2G9 1366 aa20.13■□□□□ 0.81
C1orf43-206ENST00000368521 NPC1L1Q9UHC9 1359 aa20.12■□□□□ 0.81
C1orf43-206ENST00000368521 NOS1P29475 1434 aa20.12■□□□□ 0.81
C1orf43-206ENST00000368521 DIP2CQ9Y2E4 1556 aa20.12■□□□□ 0.81
C1orf43-206ENST00000368521 PANK3Q9H999 370 aa20.11■□□□□ 0.81
C1orf43-206ENST00000368521 RICTORQ6R327 1708 aa20.11■□□□□ 0.81
C1orf43-206ENST00000368521 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
C1orf43-206ENST00000368521 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
C1orf43-206ENST00000368521 MYO3AQ8NEV4 1616 aa20.09■□□□□ 0.81
C1orf43-206ENST00000368521 NUDCQ9Y266 331 aa20.09■□□□□ 0.81
C1orf43-206ENST00000368521 RNF123Q5XPI4 1314 aa20.09■□□□□ 0.81
C1orf43-206ENST00000368521 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
C1orf43-206ENST00000368521 CAMSAP1Q5T5Y3 1602 aa20.07■□□□□ 0.8
C1orf43-206ENST00000368521 PIK3C2BO00750 1634 aa20.06■□□□□ 0.8
C1orf43-206ENST00000368521 ADGRF5Q8IZF2 1346 aa20.06■□□□□ 0.8
C1orf43-206ENST00000368521 BCANQ96GW7 911 aa20.05■□□□□ 0.8
C1orf43-206ENST00000368521 PPLO60437 1756 aa20.05■□□□□ 0.8
C1orf43-206ENST00000368521 PDE3BQ13370 1112 aa20.05■□□□□ 0.8
C1orf43-206ENST00000368521 TSHZ2Q9NRE2 1034 aa20.05■□□□□ 0.8
C1orf43-206ENST00000368521 PIK3C2GO75747 1445 aa20.04■□□□□ 0.8
C1orf43-206ENST00000368521 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
C1orf43-206ENST00000368521 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
C1orf43-206ENST00000368521 KDM5AP29375 1690 aaKnown RBP20.03■□□□□ 0.8
C1orf43-206ENST00000368521 CFAP70Q5T0N1 1121 aa20.02■□□□□ 0.8
C1orf43-206ENST00000368521 GGT6Q6P531 493 aa20.02■□□□□ 0.8
C1orf43-206ENST00000368521 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
C1orf43-206ENST00000368521 RAPGEF3O95398 923 aa20.02■□□□□ 0.79
C1orf43-206ENST00000368521 BLMP54132 1417 aaPredicted RBP20.01■□□□□ 0.79
C1orf43-206ENST00000368521 ASXL1Q8IXJ9 1541 aa20.01■□□□□ 0.79
C1orf43-206ENST00000368521 AMER1Q5JTC6 1135 aaPredicted RBP20.01■□□□□ 0.79
C1orf43-206ENST00000368521 KNSTRNQ9Y448 316 aa20.01■□□□□ 0.79
C1orf43-206ENST00000368521 MYOM1P52179 1685 aa20.01■□□□□ 0.79
C1orf43-206ENST00000368521 ZFYVE9O95405 1425 aa20.01■□□□□ 0.79
C1orf43-206ENST00000368521 ERVK-7P63135 1459 aa20■□□□□ 0.79
C1orf43-206ENST00000368521 REREQ9P2R6 1566 aa20■□□□□ 0.79
C1orf43-206ENST00000368521 PUS7Q96PZ0 661 aaKnown RBP19.99■□□□□ 0.79
C1orf43-206ENST00000368521 ADGRB1O14514 1584 aa19.98■□□□□ 0.79
C1orf43-206ENST00000368521 SLC52A1Q9NWF4 448 aa19.98■□□□□ 0.79
C1orf43-206ENST00000368521 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
C1orf43-206ENST00000368521 DIP2BQ9P265 1576 aa19.97■□□□□ 0.79
C1orf43-206ENST00000368521 FAM69CQ0P6D2 419 aa19.96■□□□□ 0.79
C1orf43-206ENST00000368521 CNGB1Q14028 1251 aaPredicted RBP19.96■□□□□ 0.79
C1orf43-206ENST00000368521 SIGLEC1Q9BZZ2 1709 aa19.96■□□□□ 0.79
C1orf43-206ENST00000368521 CC2D1BQ5T0F9 858 aaKnown RBP19.96■□□□□ 0.79
C1orf43-206ENST00000368521 VGFO15240 615 aaPredicted RBP19.94■□□□□ 0.78
C1orf43-206ENST00000368521 AGLP35573 1532 aa19.94■□□□□ 0.78
C1orf43-206ENST00000368521 YEATS2Q9ULM3 1422 aa19.94■□□□□ 0.78
C1orf43-206ENST00000368521 CENPJQ9HC77 1338 aaPredicted RBP19.94■□□□□ 0.78
C1orf43-206ENST00000368521 NEXMIFQ5QGS0 1516 aa19.93■□□□□ 0.78
C1orf43-206ENST00000368521 PPP2R1AP30153 589 aa19.92■□□□□ 0.78
C1orf43-206ENST00000368521 CHGAP10645 457 aaKnown RBP19.88■□□□□ 0.77
C1orf43-206ENST00000368521 PREX1Q8TCU6 1659 aa19.87■□□□□ 0.77
C1orf43-206ENST00000368521 IRX6P78412 446 aaPredicted RBP19.86■□□□□ 0.77
C1orf43-206ENST00000368521 IDI1Q13907 227 aa19.85■□□□□ 0.77
C1orf43-206ENST00000368521 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
C1orf43-206ENST00000368521 CFAP65Q6ZU64 1925 aaKnown RBP19.84■□□□□ 0.77
C1orf43-206ENST00000368521 TMEM131LA2VDJ0 1609 aa19.84■□□□□ 0.77
C1orf43-206ENST00000368521 KIF13AQ9H1H9 1805 aa19.84■□□□□ 0.77
C1orf43-206ENST00000368521 USP32Q8NFA0 1604 aa19.83■□□□□ 0.77
C1orf43-206ENST00000368521 NGEFQ8N5V2 710 aa19.83■□□□□ 0.77
C1orf43-206ENST00000368521 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
C1orf43-206ENST00000368521 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
C1orf43-206ENST00000368521 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
C1orf43-206ENST00000368521 TRAK1Q9UPV9 953 aa19.79■□□□□ 0.76
C1orf43-206ENST00000368521 ARHGEF28Q8N1W1 1705 aaKnown RBP19.79■□□□□ 0.76
C1orf43-206ENST00000368521 NINLQ9Y2I6 1382 aa19.79■□□□□ 0.76
C1orf43-206ENST00000368521 RCAN3Q9UKA8 241 aa19.79■□□□□ 0.76
C1orf43-206ENST00000368521 POLR3AO14802 1390 aaPredicted RBP19.78■□□□□ 0.76
C1orf43-206ENST00000368521 EVC2Q86UK5 1308 aa19.77■□□□□ 0.76
C1orf43-206ENST00000368521 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
C1orf43-206ENST00000368521 NSD2O96028 1365 aa19.76■□□□□ 0.75
C1orf43-206ENST00000368521 ZNF521Q96K83 1311 aa19.76■□□□□ 0.75
C1orf43-206ENST00000368521 SPATA31D1Q6ZQQ2 1576 aa19.75■□□□□ 0.75
C1orf43-206ENST00000368521 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
C1orf43-206ENST00000368521 TMEM132EQ6IEE7 984 aa19.74■□□□□ 0.75
C1orf43-206ENST00000368521 TULP4Q9NRJ4 1543 aa19.73■□□□□ 0.75
C1orf43-206ENST00000368521 ANKRD36BQ8N2N9 1353 aa19.73■□□□□ 0.75
C1orf43-206ENST00000368521 ARHGEF40Q8TER5 1519 aa19.71■□□□□ 0.75
C1orf43-206ENST00000368521 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
C1orf43-206ENST00000368521 TSPOAP1O95153 1857 aa19.71■□□□□ 0.75
C1orf43-206ENST00000368521 NSD3Q9BZ95 1437 aa19.71■□□□□ 0.75
C1orf43-206ENST00000368521 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
C1orf43-206ENST00000368521 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
C1orf43-206ENST00000368521 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
C1orf43-206ENST00000368521 MYO5BQ9ULV0 1848 aa19.69■□□□□ 0.74
C1orf43-206ENST00000368521 PTPRMP28827 1452 aa19.68■□□□□ 0.74
C1orf43-206ENST00000368521 CDCA7LQ96GN5 454 aa19.68■□□□□ 0.74
C1orf43-206ENST00000368521 CLTCQ00610 1675 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms