RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
THBS3-201ENST00000368378 BCAR3O75815 825 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 TMF1P82094 1093 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 CLUAP1Q96AJ1 413 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 CDC42BPBQ9Y5S2 1711 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 UHRF1BP1LA0JNW5 1464 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
THBS3-201ENST00000368378 TESK2Q96S53 571 aa11.61□□□□□ -0.55
THBS3-201ENST00000368378 BACH2Q9BYV9 841 aa11.61□□□□□ -0.55
THBS3-201ENST00000368378 BRPF3Q9ULD4 1205 aa11.61□□□□□ -0.55
THBS3-201ENST00000368378 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
THBS3-201ENST00000368378 A2MP01023 1474 aa11.6□□□□□ -0.55
THBS3-201ENST00000368378 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
THBS3-201ENST00000368378 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
THBS3-201ENST00000368378 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
THBS3-201ENST00000368378 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
THBS3-201ENST00000368378 ARHGEF5Q12774 1597 aa11.59□□□□□ -0.55
THBS3-201ENST00000368378 ZCCHC11Q5TAX3 1644 aaKnown RBP11.58□□□□□ -0.56
THBS3-201ENST00000368378 TRPM1Q7Z4N2 1603 aa11.58□□□□□ -0.56
THBS3-201ENST00000368378 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.56
THBS3-201ENST00000368378 ERBINQ96RT1 1412 aa11.58□□□□□ -0.56
THBS3-201ENST00000368378 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
THBS3-201ENST00000368378 PREX2Q70Z35 1606 aa11.57□□□□□ -0.56
THBS3-201ENST00000368378 PANK1Q8TE04 598 aa11.57□□□□□ -0.56
THBS3-201ENST00000368378 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
THBS3-201ENST00000368378 E9PCH4 1651 aa11.56□□□□□ -0.56
THBS3-201ENST00000368378 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
THBS3-201ENST00000368378 EFCAB2Q5VUJ9 269 aa11.55□□□□□ -0.56
THBS3-201ENST00000368378 CD109Q6YHK3 1445 aa11.55□□□□□ -0.56
THBS3-201ENST00000368378 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
THBS3-201ENST00000368378 COL17A1Q9UMD9 1497 aaPredicted RBP11.55□□□□□ -0.56
THBS3-201ENST00000368378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.55□□□□□ -0.56
THBS3-201ENST00000368378 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
THBS3-201ENST00000368378 CFAP70Q5T0N1 1121 aa11.54□□□□□ -0.56
THBS3-201ENST00000368378 WDR7Q9Y4E6 1490 aa11.54□□□□□ -0.56
THBS3-201ENST00000368378 TRAK1Q9UPV9 953 aa11.54□□□□□ -0.56
THBS3-201ENST00000368378 TNNQ9UQP3 1299 aa11.54□□□□□ -0.56
THBS3-201ENST00000368378 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
THBS3-201ENST00000368378 KIF3BO15066 747 aa11.53□□□□□ -0.56
THBS3-201ENST00000368378 NFKBIBQ15653 356 aa11.53□□□□□ -0.56
THBS3-201ENST00000368378 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
THBS3-201ENST00000368378 MYO5CQ9NQX4 1742 aa11.53□□□□□ -0.56
THBS3-201ENST00000368378 PLEKHH1Q9ULM0 1364 aa11.52□□□□□ -0.56
THBS3-201ENST00000368378 TMEM132EQ6IEE7 984 aa11.52□□□□□ -0.56
THBS3-201ENST00000368378 GPRASP1Q5JY77 1395 aa11.52□□□□□ -0.57
THBS3-201ENST00000368378 SPAG9O60271 1321 aaKnown RBP11.52□□□□□ -0.57
THBS3-201ENST00000368378 PLCH2O75038 1416 aa11.51□□□□□ -0.57
THBS3-201ENST00000368378 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
THBS3-201ENST00000368378 TRAPPC8Q9Y2L5 1435 aa11.5□□□□□ -0.57
THBS3-201ENST00000368378 PRDM15P57071 1507 aaPredicted RBP11.5□□□□□ -0.57
THBS3-201ENST00000368378 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
THBS3-201ENST00000368378 GGT6Q6P531 493 aa11.5□□□□□ -0.57
THBS3-201ENST00000368378 DHX37Q8IY37 1157 aaKnown RBP11.5□□□□□ -0.57
THBS3-201ENST00000368378 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
THBS3-201ENST00000368378 PPM1GO15355 546 aaPredicted RBP11.49□□□□□ -0.57
THBS3-201ENST00000368378 WASHC2CQ9Y4E1 1318 aa11.49□□□□□ -0.57
THBS3-201ENST00000368378 UNC13BO14795 1591 aa11.49□□□□□ -0.57
THBS3-201ENST00000368378 IGHDP01880 384 aa11.49□□□□□ -0.57
THBS3-201ENST00000368378 STK26Q9P289 416 aa11.49□□□□□ -0.57
THBS3-201ENST00000368378 MAGI2Q86UL8 1455 aa11.48□□□□□ -0.57
THBS3-201ENST00000368378 SEC24BO95487 1268 aa11.48□□□□□ -0.57
THBS3-201ENST00000368378 DUOX2Q9NRD8 1548 aa11.48□□□□□ -0.57
THBS3-201ENST00000368378 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.48□□□□□ -0.57
THBS3-201ENST00000368378 SCAPERQ9BY12 1400 aa11.47□□□□□ -0.57
THBS3-201ENST00000368378 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
THBS3-201ENST00000368378 IQGAP3Q86VI3 1631 aa11.47□□□□□ -0.57
THBS3-201ENST00000368378 BLMP54132 1417 aaPredicted RBP11.47□□□□□ -0.57
THBS3-201ENST00000368378 U2SURPO15042 1029 aaKnown RBP11.47□□□□□ -0.57
THBS3-201ENST00000368378 SLC12A5Q9H2X9 1139 aa11.47□□□□□ -0.57
THBS3-201ENST00000368378 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
THBS3-201ENST00000368378 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.58
THBS3-201ENST00000368378 FAM161AQ3B820 660 aa11.46□□□□□ -0.58
THBS3-201ENST00000368378 FANCAO15360 1455 aa11.46□□□□□ -0.58
THBS3-201ENST00000368378 EIF2AK4Q9P2K8 1649 aaKnown RBP11.45□□□□□ -0.58
THBS3-201ENST00000368378 DDRGK1Q96HY6 314 aa11.45□□□□□ -0.58
THBS3-201ENST00000368378 CDCA8Q53HL2 280 aa11.45□□□□□ -0.58
THBS3-201ENST00000368378 MORC1Q86VD1 984 aa11.45□□□□□ -0.58
THBS3-201ENST00000368378 GSE1Q14687 1217 aa11.44□□□□□ -0.58
THBS3-201ENST00000368378 KCNA4P22459 653 aa11.44□□□□□ -0.58
THBS3-201ENST00000368378 C8orf34Q49A92 452 aa11.44□□□□□ -0.58
THBS3-201ENST00000368378 CENPQQ7L2Z9 268 aaPredicted RBP11.44□□□□□ -0.58
THBS3-201ENST00000368378 PLXNC1O60486 1568 aa11.43□□□□□ -0.58
THBS3-201ENST00000368378 ZMYM4Q5VZL5 1548 aa11.43□□□□□ -0.58
THBS3-201ENST00000368378 MS4A1P11836 297 aa11.43□□□□□ -0.58
THBS3-201ENST00000368378 U2AF1L5P0DN76 240 aaPredicted RBP11.43□□□□□ -0.58
THBS3-201ENST00000368378 FBLN1P23142 703 aa11.43□□□□□ -0.58
THBS3-201ENST00000368378 U2AF1Q01081 240 aaKnown RBP eCLIP11.43□□□□□ -0.58
THBS3-201ENST00000368378 C14orf37Q86TY3 774 aa11.43□□□□□ -0.58
THBS3-201ENST00000368378 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
THBS3-201ENST00000368378 CHMP4AQ9BY43 222 aa11.43□□□□□ -0.58
THBS3-201ENST00000368378 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
THBS3-201ENST00000368378 A0A0U1RQG5 324 aaPredicted RBP11.42□□□□□ -0.58
THBS3-201ENST00000368378 ARAP3Q8WWN8 1544 aa11.42□□□□□ -0.58
THBS3-201ENST00000368378 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
THBS3-201ENST00000368378 ADGRL1O94910 1474 aa11.42□□□□□ -0.58
THBS3-201ENST00000368378 CENPJQ9HC77 1338 aaPredicted RBP11.41□□□□□ -0.58
THBS3-201ENST00000368378 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
THBS3-201ENST00000368378 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms