RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 SCAF11Q99590 1463 aaKnown RBP16.6■□□□□ 0.25
LMNA-206ENST00000368300 LAMC1P11047 1609 aa16.59■□□□□ 0.25
LMNA-206ENST00000368300 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
LMNA-206ENST00000368300 NOS1P29475 1434 aa16.58■□□□□ 0.25
LMNA-206ENST00000368300 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
LMNA-206ENST00000368300 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.24
LMNA-206ENST00000368300 RNF17Q9BXT8 1623 aaKnown RBP16.58■□□□□ 0.24
LMNA-206ENST00000368300 YEATS2Q9ULM3 1422 aa16.57■□□□□ 0.24
LMNA-206ENST00000368300 HECW2Q9P2P5 1572 aa16.57■□□□□ 0.24
LMNA-206ENST00000368300 ABCA6Q8N139 1617 aa16.56■□□□□ 0.24
LMNA-206ENST00000368300 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
LMNA-206ENST00000368300 NEO1Q92859 1461 aa16.55■□□□□ 0.24
LMNA-206ENST00000368300 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
LMNA-206ENST00000368300 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
LMNA-206ENST00000368300 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
LMNA-206ENST00000368300 LMTK2Q8IWU2 1503 aa16.53■□□□□ 0.24
LMNA-206ENST00000368300 ANO8Q9HCE9 1232 aaPredicted RBP16.53■□□□□ 0.24
LMNA-206ENST00000368300 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
LMNA-206ENST00000368300 AMER1Q5JTC6 1135 aaPredicted RBP16.52■□□□□ 0.24
LMNA-206ENST00000368300 IQGAP1P46940 1657 aa16.52■□□□□ 0.23
LMNA-206ENST00000368300 B4GALNT3Q6L9W6 998 aa16.52■□□□□ 0.23
LMNA-206ENST00000368300 MROH2AA6NES4 1674 aa16.52■□□□□ 0.23
LMNA-206ENST00000368300 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
LMNA-206ENST00000368300 IDI1Q13907 227 aa16.51■□□□□ 0.23
LMNA-206ENST00000368300 ABCC3O15438 1527 aa16.51■□□□□ 0.23
LMNA-206ENST00000368300 MAP3K4Q9Y6R4 1608 aa16.51■□□□□ 0.23
LMNA-206ENST00000368300 KIF1BO60333 1816 aa16.5■□□□□ 0.23
LMNA-206ENST00000368300 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
LMNA-206ENST00000368300 MYOM2P54296 1465 aa16.5■□□□□ 0.23
LMNA-206ENST00000368300 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
LMNA-206ENST00000368300 C14orf93Q9H972 538 aaKnown RBP16.49■□□□□ 0.23
LMNA-206ENST00000368300 DIP2CQ9Y2E4 1556 aa16.49■□□□□ 0.23
LMNA-206ENST00000368300 CDCA7LQ96GN5 454 aa16.48■□□□□ 0.23
LMNA-206ENST00000368300 PPP4R2Q9NY27 417 aa16.48■□□□□ 0.23
LMNA-206ENST00000368300 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
LMNA-206ENST00000368300 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
LMNA-206ENST00000368300 CENPJQ9HC77 1338 aaPredicted RBP16.47■□□□□ 0.23
LMNA-206ENST00000368300 MLECQ14165 292 aa16.47■□□□□ 0.23
LMNA-206ENST00000368300 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
LMNA-206ENST00000368300 ADGRB3O60242 1522 aa16.47■□□□□ 0.23
LMNA-206ENST00000368300 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
LMNA-206ENST00000368300 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
LMNA-206ENST00000368300 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
LMNA-206ENST00000368300 ERVK-7P63135 1459 aa16.45■□□□□ 0.22
LMNA-206ENST00000368300 STK26Q9P289 416 aa16.45■□□□□ 0.22
LMNA-206ENST00000368300 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
LMNA-206ENST00000368300 NRXN1Q9ULB1 1477 aa16.44■□□□□ 0.22
LMNA-206ENST00000368300 PIK3C2GO75747 1445 aa16.43■□□□□ 0.22
LMNA-206ENST00000368300 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
LMNA-206ENST00000368300 RICTORQ6R327 1708 aa16.43■□□□□ 0.22
LMNA-206ENST00000368300 SIGLEC1Q9BZZ2 1709 aa16.43■□□□□ 0.22
LMNA-206ENST00000368300 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
LMNA-206ENST00000368300 TSPOAP1O95153 1857 aa16.42■□□□□ 0.22
LMNA-206ENST00000368300 RPGRIP1LQ68CZ1 1315 aa16.42■□□□□ 0.22
LMNA-206ENST00000368300 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
LMNA-206ENST00000368300 CCDC136Q96JN2 1154 aa16.42■□□□□ 0.22
LMNA-206ENST00000368300 WDR43Q15061 677 aaKnown RBP eCLIP16.41■□□□□ 0.22
LMNA-206ENST00000368300 CAMSAP1Q5T5Y3 1602 aa16.41■□□□□ 0.22
LMNA-206ENST00000368300 ERICH6BQ5W0A0 696 aa16.41■□□□□ 0.22
LMNA-206ENST00000368300 KIAA1210Q9ULL0 1709 aa16.4■□□□□ 0.22
LMNA-206ENST00000368300 SYNMO15061 1565 aa16.4■□□□□ 0.22
LMNA-206ENST00000368300 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
LMNA-206ENST00000368300 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
LMNA-206ENST00000368300 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
LMNA-206ENST00000368300 RBM19Q9Y4C8 960 aaKnown RBP16.39■□□□□ 0.21
LMNA-206ENST00000368300 SLC52A1Q9NWF4 448 aa16.38■□□□□ 0.21
LMNA-206ENST00000368300 STAG3Q9UJ98 1225 aa16.38■□□□□ 0.21
LMNA-206ENST00000368300 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
LMNA-206ENST00000368300 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
LMNA-206ENST00000368300 SLC24A1O60721 1099 aa16.37■□□□□ 0.21
LMNA-206ENST00000368300 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
LMNA-206ENST00000368300 GLI2P10070 1586 aa16.36■□□□□ 0.21
LMNA-206ENST00000368300 MYOM1P52179 1685 aa16.36■□□□□ 0.21
LMNA-206ENST00000368300 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
LMNA-206ENST00000368300 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
LMNA-206ENST00000368300 PPLO60437 1756 aa16.36■□□□□ 0.21
LMNA-206ENST00000368300 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
LMNA-206ENST00000368300 ARHGAP31Q2M1Z3 1444 aa16.35■□□□□ 0.21
LMNA-206ENST00000368300 BLMP54132 1417 aaPredicted RBP16.34■□□□□ 0.21
LMNA-206ENST00000368300 PLIN1O60240 522 aa16.34■□□□□ 0.21
LMNA-206ENST00000368300 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
LMNA-206ENST00000368300 RRP1P56182 461 aaKnown RBP16.33■□□□□ 0.21
LMNA-206ENST00000368300 SBNO2Q9Y2G9 1366 aa16.33■□□□□ 0.2
LMNA-206ENST00000368300 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
LMNA-206ENST00000368300 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.2
LMNA-206ENST00000368300 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
LMNA-206ENST00000368300 PLEKHH1Q9ULM0 1364 aa16.32■□□□□ 0.2
LMNA-206ENST00000368300 SETBP1Q9Y6X0 1596 aa16.32■□□□□ 0.2
LMNA-206ENST00000368300 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
LMNA-206ENST00000368300 EXOC6Q8TAG9 804 aa16.31■□□□□ 0.2
LMNA-206ENST00000368300 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
LMNA-206ENST00000368300 PIK3C2BO00750 1634 aa16.31■□□□□ 0.2
LMNA-206ENST00000368300 APAF1O14727 1248 aa16.3■□□□□ 0.2
LMNA-206ENST00000368300 SRPK2P78362 688 aaKnown RBP16.3■□□□□ 0.2
LMNA-206ENST00000368300 EVC2Q86UK5 1308 aa16.3■□□□□ 0.2
LMNA-206ENST00000368300 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
LMNA-206ENST00000368300 POGKQ9P215 609 aa16.29■□□□□ 0.2
LMNA-206ENST00000368300 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.19
LMNA-206ENST00000368300 ZMYM4Q5VZL5 1548 aa16.27■□□□□ 0.19
LMNA-206ENST00000368300 MYO3AQ8NEV4 1616 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms