RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
ECHDC1-201ENST00000368287 EMID1Q96A84 441 aaPredicted RBP10.01□□□□□ -0.81
ECHDC1-201ENST00000368287 FAM187AA6NFU0 413 aa10□□□□□ -0.81
ECHDC1-201ENST00000368287 POTECB2RU33 542 aa10□□□□□ -0.81
ECHDC1-201ENST00000368287 TLL1O43897 1013 aa10□□□□□ -0.81
ECHDC1-201ENST00000368287 ANKLE1Q8NAG6 615 aa9.99□□□□□ -0.81
ECHDC1-201ENST00000368287 NPDC1Q9NQX5 325 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-201ENST00000368287 WDR70Q9NW82 654 aa9.99□□□□□ -0.81
ECHDC1-201ENST00000368287 ZNF697Q5TEC3 545 aa9.98□□□□□ -0.81
ECHDC1-201ENST00000368287 BBXQ8WY36 941 aaPredicted RBP9.98□□□□□ -0.81
ECHDC1-201ENST00000368287 EYA1Q99502 592 aa9.98□□□□□ -0.81
ECHDC1-201ENST00000368287 TNFRSF10AO00220 468 aa9.96□□□□□ -0.82
ECHDC1-201ENST00000368287 PPEF1O14829 653 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-201ENST00000368287 S1PR4O95977 384 aa9.96□□□□□ -0.82
ECHDC1-201ENST00000368287 LIAT1Q6ZQX7 453 aa9.95□□□□□ -0.82
ECHDC1-201ENST00000368287 GDF9O60383 454 aa9.93□□□□□ -0.82
ECHDC1-201ENST00000368287 KMT5BQ4FZB7 885 aa9.93□□□□□ -0.82
ECHDC1-201ENST00000368287 DNAJB2P25686 324 aa9.92□□□□□ -0.82
ECHDC1-201ENST00000368287 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
ECHDC1-201ENST00000368287 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
ECHDC1-201ENST00000368287 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
ECHDC1-201ENST00000368287 ACTN4O43707 911 aaKnown RBP9.91□□□□□ -0.82
ECHDC1-201ENST00000368287 AAASQ9NRG9 546 aa9.9□□□□□ -0.82
ECHDC1-201ENST00000368287 ADH1BP00325 375 aa9.89□□□□□ -0.83
ECHDC1-201ENST00000368287 CFHP08603 1231 aa9.88□□□□□ -0.83
ECHDC1-201ENST00000368287 RBM46Q8TBY0 533 aaKnown RBP9.88□□□□□ -0.83
ECHDC1-201ENST00000368287 TMEM134Q9H6X4 195 aa9.88□□□□□ -0.83
ECHDC1-201ENST00000368287 NR1I2O75469 434 aa9.86□□□□□ -0.83
ECHDC1-201ENST00000368287 SLC6A16Q9GZN6 736 aa9.86□□□□□ -0.83
ECHDC1-201ENST00000368287 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
ECHDC1-201ENST00000368287 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
ECHDC1-201ENST00000368287 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
ECHDC1-201ENST00000368287 FOXC1Q12948 553 aa9.83□□□□□ -0.84
ECHDC1-201ENST00000368287 RCCD1A6NED2 376 aa9.82□□□□□ -0.84
ECHDC1-201ENST00000368287 LMOD2Q6P5Q4 547 aa9.82□□□□□ -0.84
ECHDC1-201ENST00000368287 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
ECHDC1-201ENST00000368287 PTGDRQ13258 359 aa9.81□□□□□ -0.84
ECHDC1-201ENST00000368287 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
ECHDC1-201ENST00000368287 WFS1O76024 890 aa9.79□□□□□ -0.84
ECHDC1-201ENST00000368287 SLC10A3P09131 477 aa9.79□□□□□ -0.84
ECHDC1-201ENST00000368287 CRIPAKQ8N1N5 446 aa9.79□□□□□ -0.84
ECHDC1-201ENST00000368287 MLLT3P42568 568 aaPredicted RBP9.78□□□□□ -0.84
ECHDC1-201ENST00000368287 FAM161AQ3B820 660 aa9.77□□□□□ -0.85
ECHDC1-201ENST00000368287 SCUBE3Q8IX30 993 aa9.77□□□□□ -0.85
ECHDC1-201ENST00000368287 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
ECHDC1-201ENST00000368287 GMPR2Q9P2T1 348 aaKnown RBP9.77□□□□□ -0.85
ECHDC1-201ENST00000368287 DACH1Q9UI36 760 aa9.77□□□□□ -0.85
ECHDC1-201ENST00000368287 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
ECHDC1-201ENST00000368287 AXIN1O15169 862 aa9.76□□□□□ -0.85
ECHDC1-201ENST00000368287 SPSB2Q99619 263 aa9.76□□□□□ -0.85
ECHDC1-201ENST00000368287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
ECHDC1-201ENST00000368287 AVPP01185 164 aa9.75□□□□□ -0.85
ECHDC1-201ENST00000368287 RPIAP49247 311 aa9.75□□□□□ -0.85
ECHDC1-201ENST00000368287 PAXIP1Q6ZW49 1069 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-201ENST00000368287 CYP4X1Q8N118 509 aa9.75□□□□□ -0.85
ECHDC1-201ENST00000368287 PUS10Q3MIT2 529 aaKnown RBP9.74□□□□□ -0.85
ECHDC1-201ENST00000368287 TOR4AQ9NXH8 423 aa9.74□□□□□ -0.85
ECHDC1-201ENST00000368287 STK17AQ9UEE5 414 aa9.74□□□□□ -0.85
ECHDC1-201ENST00000368287 CTC1Q2NKJ3 1217 aa9.73□□□□□ -0.85
ECHDC1-201ENST00000368287 NUTM2FA1L443 756 aa9.72□□□□□ -0.85
ECHDC1-201ENST00000368287 CD2BP2O95400 341 aaKnown RBP9.72□□□□□ -0.85
ECHDC1-201ENST00000368287 RSPH4AQ5TD94 716 aa9.72□□□□□ -0.85
ECHDC1-201ENST00000368287 INSM1Q01101 510 aaPredicted RBP9.71□□□□□ -0.86
ECHDC1-201ENST00000368287 FCF1Q9Y324 198 aaKnown RBP9.71□□□□□ -0.86
ECHDC1-201ENST00000368287 WIPF1O43516 503 aa9.69□□□□□ -0.86
ECHDC1-201ENST00000368287 SMCPP49901 116 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-201ENST00000368287 NFX1Q12986 1120 aaKnown RBP9.69□□□□□ -0.86
ECHDC1-201ENST00000368287 ARHGEF1Q92888 912 aaKnown RBP9.69□□□□□ -0.86
ECHDC1-201ENST00000368287 TTC24A2A3L6 582 aaPredicted RBP9.67□□□□□ -0.86
ECHDC1-201ENST00000368287 FCHSD2O94868 740 aa9.67□□□□□ -0.86
ECHDC1-201ENST00000368287 OATP04181 439 aa9.67□□□□□ -0.86
ECHDC1-201ENST00000368287 PXYLP1Q8TE99 480 aa9.66□□□□□ -0.86
ECHDC1-201ENST00000368287 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-201ENST00000368287 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
ECHDC1-201ENST00000368287 MORN1Q5T089 497 aa9.63□□□□□ -0.87
ECHDC1-201ENST00000368287 RDH13Q8NBN7 331 aa9.63□□□□□ -0.87
ECHDC1-201ENST00000368287 THAP11Q96EK4 314 aa9.62□□□□□ -0.87
ECHDC1-201ENST00000368287 FAM160A2Q8N612 972 aaPredicted RBP9.61□□□□□ -0.87
ECHDC1-201ENST00000368287 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
ECHDC1-201ENST00000368287 ATP13A2Q9NQ11 1180 aa9.61□□□□□ -0.87
ECHDC1-201ENST00000368287 FUT2Q10981 343 aa9.6□□□□□ -0.87
ECHDC1-201ENST00000368287 METTL3Q86U44 580 aaKnown RBP9.6□□□□□ -0.87
ECHDC1-201ENST00000368287 PRDM9Q9NQV7 894 aa9.6□□□□□ -0.87
ECHDC1-201ENST00000368287 TERTO14746 1132 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-201ENST00000368287 SNRPBP14678 240 aaKnown RBP9.59□□□□□ -0.87
ECHDC1-201ENST00000368287 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
ECHDC1-201ENST00000368287 SENP2Q9HC62 589 aa9.59□□□□□ -0.87
ECHDC1-201ENST00000368287 SLC27A5Q9Y2P5 690 aa9.59□□□□□ -0.87
ECHDC1-201ENST00000368287 SMPD1P17405 629 aa9.58□□□□□ -0.88
ECHDC1-201ENST00000368287 SNIP1Q8TAD8 396 aaKnown RBP9.58□□□□□ -0.88
ECHDC1-201ENST00000368287 WNT7AO00755 349 aa9.57□□□□□ -0.88
ECHDC1-201ENST00000368287 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
ECHDC1-201ENST00000368287 DAXXQ9UER7 740 aaPredicted RBP9.57□□□□□ -0.88
ECHDC1-201ENST00000368287 DDX11L8A8MPP1 907 aa9.56□□□□□ -0.88
ECHDC1-201ENST00000368287 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
ECHDC1-201ENST00000368287 HIC1Q14526 733 aa9.55□□□□□ -0.88
ECHDC1-201ENST00000368287 MSS51Q4VC12 460 aa9.55□□□□□ -0.88
ECHDC1-201ENST00000368287 SALL2Q9Y467 1007 aaPredicted RBP9.55□□□□□ -0.88
ECHDC1-201ENST00000368287 TRIM32Q13049 653 aa9.54□□□□□ -0.88
ECHDC1-201ENST00000368287 BRICD5Q6PL45 260 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms