RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 PTPREP23469 700 aa9.49□□□□□ -0.89
CFHR3-201ENST00000367425 PRSS12P56730 875 aa9.49□□□□□ -0.89
CFHR3-201ENST00000367425 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
CFHR3-201ENST00000367425 BHMG1C9JSJ3 638 aaPredicted RBP9.47□□□□□ -0.89
CFHR3-201ENST00000367425 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
CFHR3-201ENST00000367425 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
CFHR3-201ENST00000367425 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
CFHR3-201ENST00000367425 PPP1R3GB7ZBB8 358 aa9.46□□□□□ -0.89
CFHR3-201ENST00000367425 CLCN1P35523 988 aa9.46□□□□□ -0.89
CFHR3-201ENST00000367425 TTC13Q8NBP0 860 aa9.46□□□□□ -0.89
CFHR3-201ENST00000367425 ADGRG1Q9Y653 693 aa9.46□□□□□ -0.89
CFHR3-201ENST00000367425 GIGYF2Q6Y7W6 1299 aaKnown RBP9.45□□□□□ -0.9
CFHR3-201ENST00000367425 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
CFHR3-201ENST00000367425 COL9A1P20849 921 aa9.45□□□□□ -0.9
CFHR3-201ENST00000367425 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
CFHR3-201ENST00000367425 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
CFHR3-201ENST00000367425 METTL3Q86U44 580 aaKnown RBP9.45□□□□□ -0.9
CFHR3-201ENST00000367425 GPCPD1Q9NPB8 672 aa9.45□□□□□ -0.9
CFHR3-201ENST00000367425 DGAT1O75907 488 aa9.44□□□□□ -0.9
CFHR3-201ENST00000367425 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
CFHR3-201ENST00000367425 RBM46Q8TBY0 533 aaKnown RBP9.44□□□□□ -0.9
CFHR3-201ENST00000367425 PXYLP1Q8TE99 480 aa9.43□□□□□ -0.9
CFHR3-201ENST00000367425 PKDCCQ504Y2 493 aa9.42□□□□□ -0.9
CFHR3-201ENST00000367425 ANKK1Q8NFD2 765 aa9.42□□□□□ -0.9
CFHR3-201ENST00000367425 PHOX2BQ99453 314 aa9.42□□□□□ -0.9
CFHR3-201ENST00000367425 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
CFHR3-201ENST00000367425 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
CFHR3-201ENST00000367425 PLEKHG3A1L390 1219 aa9.39□□□□□ -0.91
CFHR3-201ENST00000367425 MS4A1P11836 297 aa9.39□□□□□ -0.91
CFHR3-201ENST00000367425 FAM198AQ9UFP1 575 aa9.39□□□□□ -0.91
CFHR3-201ENST00000367425 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
CFHR3-201ENST00000367425 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
CFHR3-201ENST00000367425 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
CFHR3-201ENST00000367425 TSKSQ9UJT2 592 aa9.38□□□□□ -0.91
CFHR3-201ENST00000367425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.38□□□□□ -0.91
CFHR3-201ENST00000367425 SSTR3P32745 418 aaPredicted RBP9.38□□□□□ -0.91
CFHR3-201ENST00000367425 MYT1Q01538 1121 aa9.37□□□□□ -0.91
CFHR3-201ENST00000367425 NLRP7Q8WX94 980 aa9.37□□□□□ -0.91
CFHR3-201ENST00000367425 KRTAP4-8Q9BYQ9 185 aa9.37□□□□□ -0.91
CFHR3-201ENST00000367425 POTECB2RU33 542 aa9.36□□□□□ -0.91
CFHR3-201ENST00000367425 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
CFHR3-201ENST00000367425 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
CFHR3-201ENST00000367425 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
CFHR3-201ENST00000367425 PNMA3Q9UL41 463 aa9.36□□□□□ -0.91
CFHR3-201ENST00000367425 TATDN2Q93075 761 aa9.35□□□□□ -0.91
CFHR3-201ENST00000367425 EYA1Q99502 592 aa9.35□□□□□ -0.91
CFHR3-201ENST00000367425 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
CFHR3-201ENST00000367425 RCCD1A6NED2 376 aa9.34□□□□□ -0.91
CFHR3-201ENST00000367425 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
CFHR3-201ENST00000367425 C14orf37Q86TY3 774 aa9.34□□□□□ -0.91
CFHR3-201ENST00000367425 DNAJB2P25686 324 aa9.33□□□□□ -0.92
CFHR3-201ENST00000367425 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
CFHR3-201ENST00000367425 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
CFHR3-201ENST00000367425 ZBED2Q9BTP6 218 aa9.32□□□□□ -0.92
CFHR3-201ENST00000367425 RSPH6AQ9H0K4 717 aa9.31□□□□□ -0.92
CFHR3-201ENST00000367425 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
CFHR3-201ENST00000367425 KIAA1468Q9P260 1216 aa9.31□□□□□ -0.92
CFHR3-201ENST00000367425 SMAPO00193 183 aa9.3□□□□□ -0.92
CFHR3-201ENST00000367425 SH3D19Q5HYK7 790 aa9.3□□□□□ -0.92
CFHR3-201ENST00000367425 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
CFHR3-201ENST00000367425 SULF1Q8IWU6 871 aa9.29□□□□□ -0.92
CFHR3-201ENST00000367425 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
CFHR3-201ENST00000367425 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.92
CFHR3-201ENST00000367425 NFX1Q12986 1120 aaKnown RBP9.27□□□□□ -0.93
CFHR3-201ENST00000367425 DIXDC1Q155Q3 683 aa9.27□□□□□ -0.93
CFHR3-201ENST00000367425 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
CFHR3-201ENST00000367425 ATP1B4Q9UN42 357 aaPredicted RBP9.26□□□□□ -0.93
CFHR3-201ENST00000367425 DDX11L8A8MPP1 907 aa9.25□□□□□ -0.93
CFHR3-201ENST00000367425 XP32Q5T750 250 aa9.25□□□□□ -0.93
CFHR3-201ENST00000367425 CD46P15529 392 aa9.24□□□□□ -0.93
CFHR3-201ENST00000367425 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
CFHR3-201ENST00000367425 SOWAHBA6NEL2 793 aa9.23□□□□□ -0.93
CFHR3-201ENST00000367425 HDGFP51858 240 aaKnown RBP9.23□□□□□ -0.93
CFHR3-201ENST00000367425 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
CFHR3-201ENST00000367425 SEPT9Q9UHD8 586 aaPredicted RBP9.23□□□□□ -0.93
CFHR3-201ENST00000367425 MYSM1Q5VVJ2 828 aa9.22□□□□□ -0.93
CFHR3-201ENST00000367425 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
CFHR3-201ENST00000367425 RDH13Q8NBN7 331 aa9.22□□□□□ -0.93
CFHR3-201ENST00000367425 SLC4A3P48751 1232 aa9.21□□□□□ -0.93
CFHR3-201ENST00000367425 FAM98CQ17RN3 349 aaKnown RBP9.21□□□□□ -0.93
CFHR3-201ENST00000367425 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.93
CFHR3-201ENST00000367425 CLK2P49760 499 aaKnown RBP9.2□□□□□ -0.94
CFHR3-201ENST00000367425 SWT1Q5T5J6 900 aaKnown RBP9.2□□□□□ -0.94
CFHR3-201ENST00000367425 LAPTM4BQ86VI4 370 aa9.19□□□□□ -0.94
CFHR3-201ENST00000367425 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
CFHR3-201ENST00000367425 PSMG3-AS1Q96PY0 264 aa9.18□□□□□ -0.94
CFHR3-201ENST00000367425 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.18□□□□□ -0.94
CFHR3-201ENST00000367425 KRTAP1-3Q8IUG1 177 aa9.17□□□□□ -0.94
CFHR3-201ENST00000367425 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
CFHR3-201ENST00000367425 FLIIQ13045 1269 aa9.16□□□□□ -0.94
CFHR3-201ENST00000367425 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
CFHR3-201ENST00000367425 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
CFHR3-201ENST00000367425 BCAMP50895 628 aa9.16□□□□□ -0.94
CFHR3-201ENST00000367425 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
CFHR3-201ENST00000367425 PPP1R18Q6NYC8 613 aa9.15□□□□□ -0.94
CFHR3-201ENST00000367425 ZSCAN1Q8NBB4 408 aa9.15□□□□□ -0.94
CFHR3-201ENST00000367425 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
CFHR3-201ENST00000367425 KDM4AO75164 1064 aa9.14□□□□□ -0.95
CFHR3-201ENST00000367425 GGCXP38435 758 aa9.14□□□□□ -0.95
CFHR3-201ENST00000367425 GCGRP47871 477 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms