RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 B4GALNT3Q6L9W6 998 aa19.88■□□□□ 0.77
PRKN-204ENST00000366896 TRPM2O94759 1503 aa19.88■□□□□ 0.77
PRKN-204ENST00000366896 CFAP65Q6ZU64 1925 aaKnown RBP19.86■□□□□ 0.77
PRKN-204ENST00000366896 KTN1Q86UP2 1357 aaKnown RBP19.86■□□□□ 0.77
PRKN-204ENST00000366896 CCDC144AA2RUR9 1427 aa19.85■□□□□ 0.77
PRKN-204ENST00000366896 ESF1Q9H501 851 aaKnown RBP19.84■□□□□ 0.77
PRKN-204ENST00000366896 FER1L4A9Z1Z3 1794 aa19.84■□□□□ 0.77
PRKN-204ENST00000366896 MROH2AA6NES4 1674 aa19.83■□□□□ 0.77
PRKN-204ENST00000366896 NOS1P29475 1434 aa19.83■□□□□ 0.76
PRKN-204ENST00000366896 RNF123Q5XPI4 1314 aa19.83■□□□□ 0.76
PRKN-204ENST00000366896 NOP58Q9Y2X3 529 aaKnown RBP19.83■□□□□ 0.76
PRKN-204ENST00000366896 PREX1Q8TCU6 1659 aa19.83■□□□□ 0.76
PRKN-204ENST00000366896 CARD11Q9BXL7 1154 aa19.82■□□□□ 0.76
PRKN-204ENST00000366896 CLTCL1P53675 1640 aa19.82■□□□□ 0.76
PRKN-204ENST00000366896 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
PRKN-204ENST00000366896 SENP3-EIF4A1A0A087X0R7 540 aa19.81■□□□□ 0.76
PRKN-204ENST00000366896 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
PRKN-204ENST00000366896 SYNMO15061 1565 aa19.8■□□□□ 0.76
PRKN-204ENST00000366896 ADAMTSL3P82987 1691 aa19.8■□□□□ 0.76
PRKN-204ENST00000366896 UGGT1Q9NYU2 1555 aa19.8■□□□□ 0.76
PRKN-204ENST00000366896 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
PRKN-204ENST00000366896 MADDQ8WXG6 1647 aa19.79■□□□□ 0.76
PRKN-204ENST00000366896 NUDCQ9Y266 331 aa19.78■□□□□ 0.76
PRKN-204ENST00000366896 FBXO31Q5XUX0 539 aaPredicted RBP19.78■□□□□ 0.76
PRKN-204ENST00000366896 SPATA31D1Q6ZQQ2 1576 aa19.77■□□□□ 0.76
PRKN-204ENST00000366896 ST20-MTHFSA0A0A6YYL1 179 aa19.77■□□□□ 0.76
PRKN-204ENST00000366896 DCAF11Q8TEB1 546 aa19.76■□□□□ 0.75
PRKN-204ENST00000366896 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
PRKN-204ENST00000366896 PIK3C2BO00750 1634 aa19.76■□□□□ 0.75
PRKN-204ENST00000366896 C3P01024 1663 aa19.75■□□□□ 0.75
PRKN-204ENST00000366896 BRD4O60885 1362 aaPredicted RBP19.75■□□□□ 0.75
PRKN-204ENST00000366896 LRPPRCP42704 1394 aaKnown RBP19.75■□□□□ 0.75
PRKN-204ENST00000366896 RIMS1Q86UR5 1692 aaKnown RBP19.74■□□□□ 0.75
PRKN-204ENST00000366896 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
PRKN-204ENST00000366896 RALBP1Q15311 655 aa19.74■□□□□ 0.75
PRKN-204ENST00000366896 KIF1BO60333 1816 aa19.73■□□□□ 0.75
PRKN-204ENST00000366896 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
PRKN-204ENST00000366896 NEURL4Q96JN8 1562 aa19.71■□□□□ 0.75
PRKN-204ENST00000366896 CEBPAP49715 358 aaPredicted RBP19.7■□□□□ 0.74
PRKN-204ENST00000366896 SLC52A1Q9NWF4 448 aa19.7■□□□□ 0.74
PRKN-204ENST00000366896 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
PRKN-204ENST00000366896 MYBBP1AQ9BQG0 1328 aaKnown RBP19.7■□□□□ 0.74
PRKN-204ENST00000366896 LAMC1P11047 1609 aa19.69■□□□□ 0.74
PRKN-204ENST00000366896 PRAG1Q86YV5 1406 aa19.69■□□□□ 0.74
PRKN-204ENST00000366896 IDI1Q13907 227 aa19.69■□□□□ 0.74
PRKN-204ENST00000366896 NBR1Q14596 966 aa19.69■□□□□ 0.74
PRKN-204ENST00000366896 ADGRB3O60242 1522 aa19.69■□□□□ 0.74
PRKN-204ENST00000366896 TRPM1Q7Z4N2 1603 aa19.68■□□□□ 0.74
PRKN-204ENST00000366896 RGL3Q3MIN7 710 aa19.68■□□□□ 0.74
PRKN-204ENST00000366896 TNRQ92752 1358 aa19.67■□□□□ 0.74
PRKN-204ENST00000366896 IPO9Q96P70 1041 aaKnown RBP19.66■□□□□ 0.74
PRKN-204ENST00000366896 INSRP06213 1382 aa19.66■□□□□ 0.74
PRKN-204ENST00000366896 TMEM131LA2VDJ0 1609 aa19.64■□□□□ 0.74
PRKN-204ENST00000366896 ANP32AP39687 249 aaKnown RBP19.64■□□□□ 0.74
PRKN-204ENST00000366896 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
PRKN-204ENST00000366896 PLPPR3Q6T4P5 718 aa19.63■□□□□ 0.73
PRKN-204ENST00000366896 PARD3Q8TEW0 1356 aa19.63■□□□□ 0.73
PRKN-204ENST00000366896 MYO5BQ9ULV0 1848 aa19.62■□□□□ 0.73
PRKN-204ENST00000366896 NBPF1Q3BBV0 1214 aa19.62■□□□□ 0.73
PRKN-204ENST00000366896 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
PRKN-204ENST00000366896 IFT172Q9UG01 1749 aa19.61■□□□□ 0.73
PRKN-204ENST00000366896 PTPRMP28827 1452 aa19.61■□□□□ 0.73
PRKN-204ENST00000366896 NLRP13Q86W25 1043 aa19.6■□□□□ 0.73
PRKN-204ENST00000366896 NLRP1Q9C000 1473 aa19.59■□□□□ 0.73
PRKN-204ENST00000366896 PDE3BQ13370 1112 aa19.58■□□□□ 0.73
PRKN-204ENST00000366896 PPLO60437 1756 aa19.58■□□□□ 0.72
PRKN-204ENST00000366896 A2ML1A8K2U0 1454 aa19.57■□□□□ 0.72
PRKN-204ENST00000366896 MYO3AQ8NEV4 1616 aa19.57■□□□□ 0.72
PRKN-204ENST00000366896 ZBTB47Q9UFB7 747 aaPredicted RBP19.57■□□□□ 0.72
PRKN-204ENST00000366896 KDM5AP29375 1690 aaKnown RBP19.57■□□□□ 0.72
PRKN-204ENST00000366896 PER1O15534 1290 aaPredicted RBP19.56■□□□□ 0.72
PRKN-204ENST00000366896 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
PRKN-204ENST00000366896 RPGRIP1LQ68CZ1 1315 aa19.56■□□□□ 0.72
PRKN-204ENST00000366896 UBR1Q8IWV7 1749 aa19.56■□□□□ 0.72
PRKN-204ENST00000366896 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
PRKN-204ENST00000366896 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
PRKN-204ENST00000366896 MYOM2P54296 1465 aa19.55■□□□□ 0.72
PRKN-204ENST00000366896 STAC3Q96MF2 364 aa19.55■□□□□ 0.72
PRKN-204ENST00000366896 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
PRKN-204ENST00000366896 KDM4FA0A1W2PPD8 638 aa19.54■□□□□ 0.72
PRKN-204ENST00000366896 SALL2Q9Y467 1007 aaPredicted RBP19.54■□□□□ 0.72
PRKN-204ENST00000366896 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.72
PRKN-204ENST00000366896 TESK2Q96S53 571 aa19.52■□□□□ 0.72
PRKN-204ENST00000366896 NRXN1Q9ULB1 1477 aa19.51■□□□□ 0.71
PRKN-204ENST00000366896 RRP1P56182 461 aaKnown RBP19.5■□□□□ 0.71
PRKN-204ENST00000366896 ADGRF5Q8IZF2 1346 aa19.5■□□□□ 0.71
PRKN-204ENST00000366896 CEP170BQ9Y4F5 1589 aaPredicted RBP19.5■□□□□ 0.71
PRKN-204ENST00000366896 ZNF142P52746 1687 aaPredicted RBP19.49■□□□□ 0.71
PRKN-204ENST00000366896 CC2D1BQ5T0F9 858 aaKnown RBP19.49■□□□□ 0.71
PRKN-204ENST00000366896 ZFYVE9O95405 1425 aa19.48■□□□□ 0.71
PRKN-204ENST00000366896 RIMS2Q9UQ26 1411 aa19.48■□□□□ 0.71
PRKN-204ENST00000366896 BLMP54132 1417 aaPredicted RBP19.47■□□□□ 0.71
PRKN-204ENST00000366896 PRKCSHP14314 528 aaPredicted RBP19.47■□□□□ 0.71
PRKN-204ENST00000366896 NUTM2DQ5VT03 806 aaPredicted RBP19.47■□□□□ 0.71
PRKN-204ENST00000366896 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
PRKN-204ENST00000366896 VGFO15240 615 aaPredicted RBP19.46■□□□□ 0.71
PRKN-204ENST00000366896 EXOC6Q8TAG9 804 aa19.46■□□□□ 0.71
PRKN-204ENST00000366896 TMEM2Q9UHN6 1383 aa19.46■□□□□ 0.71
PRKN-204ENST00000366896 PIK3C2GO75747 1445 aa19.45■□□□□ 0.7
PRKN-204ENST00000366896 PANK3Q9H999 370 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms