RNA–Protein interactions for RNA: ENST00000366873.6

CAPN8-202, Transcript of calpain 8, humanhuman

TSL 5 BASIC

Gene CAPN8, Length 2,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-202ENST00000366873 UBR1Q8IWV7 1749 aa14□□□□□ -0.17
CAPN8-202ENST00000366873 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
CAPN8-202ENST00000366873 CEP170BQ9Y4F5 1589 aaPredicted RBP13.99□□□□□ -0.17
CAPN8-202ENST00000366873 ADGRF5Q8IZF2 1346 aa13.99□□□□□ -0.17
CAPN8-202ENST00000366873 TMEM2Q9UHN6 1383 aa13.99□□□□□ -0.17
CAPN8-202ENST00000366873 NEXMIFQ5QGS0 1516 aa13.98□□□□□ -0.17
CAPN8-202ENST00000366873 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
CAPN8-202ENST00000366873 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
CAPN8-202ENST00000366873 UHRF1BP1Q6BDS2 1440 aa13.98□□□□□ -0.17
CAPN8-202ENST00000366873 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
CAPN8-202ENST00000366873 LTKP29376 864 aa13.97□□□□□ -0.17
CAPN8-202ENST00000366873 STAC3Q96MF2 364 aa13.96□□□□□ -0.17
CAPN8-202ENST00000366873 ZNF142P52746 1687 aaPredicted RBP13.96□□□□□ -0.18
CAPN8-202ENST00000366873 RIMS2Q9UQ26 1411 aa13.96□□□□□ -0.18
CAPN8-202ENST00000366873 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
CAPN8-202ENST00000366873 ARHGAP23Q9P227 1491 aa13.95□□□□□ -0.18
CAPN8-202ENST00000366873 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
CAPN8-202ENST00000366873 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
CAPN8-202ENST00000366873 VGFO15240 615 aaPredicted RBP13.95□□□□□ -0.18
CAPN8-202ENST00000366873 SLIT1O75093 1534 aa13.95□□□□□ -0.18
CAPN8-202ENST00000366873 PPLO60437 1756 aa13.95□□□□□ -0.18
CAPN8-202ENST00000366873 MYOM2P54296 1465 aa13.94□□□□□ -0.18
CAPN8-202ENST00000366873 LMTK3Q96Q04 1460 aa13.94□□□□□ -0.18
CAPN8-202ENST00000366873 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
CAPN8-202ENST00000366873 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
CAPN8-202ENST00000366873 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
CAPN8-202ENST00000366873 HSPA2P54652 639 aa13.92□□□□□ -0.18
CAPN8-202ENST00000366873 NBPF1Q3BBV0 1214 aa13.91□□□□□ -0.18
CAPN8-202ENST00000366873 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.91□□□□□ -0.18
CAPN8-202ENST00000366873 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
CAPN8-202ENST00000366873 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
CAPN8-202ENST00000366873 C14orf93Q9H972 538 aaKnown RBP13.89□□□□□ -0.19
CAPN8-202ENST00000366873 EID1Q9Y6B2 187 aa13.89□□□□□ -0.19
CAPN8-202ENST00000366873 ANKLE2Q86XL3 938 aa13.88□□□□□ -0.19
CAPN8-202ENST00000366873 SCAF11Q99590 1463 aaKnown RBP13.88□□□□□ -0.19
CAPN8-202ENST00000366873 PLEKHG1Q9ULL1 1385 aa13.87□□□□□ -0.19
CAPN8-202ENST00000366873 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
CAPN8-202ENST00000366873 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
CAPN8-202ENST00000366873 RALGAPBQ86X10 1494 aa13.86□□□□□ -0.19
CAPN8-202ENST00000366873 ADAMTS13Q76LX8 1427 aa13.86□□□□□ -0.19
CAPN8-202ENST00000366873 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
CAPN8-202ENST00000366873 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
CAPN8-202ENST00000366873 GPRASP1Q5JY77 1395 aa13.85□□□□□ -0.19
CAPN8-202ENST00000366873 SETBP1Q9Y6X0 1596 aa13.84□□□□□ -0.19
CAPN8-202ENST00000366873 SLC26A8Q96RN1 970 aa13.84□□□□□ -0.19
CAPN8-202ENST00000366873 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
CAPN8-202ENST00000366873 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
CAPN8-202ENST00000366873 MED14O60244 1454 aa13.84□□□□□ -0.19
CAPN8-202ENST00000366873 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
CAPN8-202ENST00000366873 METP08581 1390 aa13.83□□□□□ -0.2
CAPN8-202ENST00000366873 CARD11Q9BXL7 1154 aa13.82□□□□□ -0.2
CAPN8-202ENST00000366873 ASXL1Q8IXJ9 1541 aa13.82□□□□□ -0.2
CAPN8-202ENST00000366873 BCANQ96GW7 911 aa13.81□□□□□ -0.2
CAPN8-202ENST00000366873 IQGAP1P46940 1657 aa13.81□□□□□ -0.2
CAPN8-202ENST00000366873 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
CAPN8-202ENST00000366873 TBX22Q9Y458 520 aa13.81□□□□□ -0.2
CAPN8-202ENST00000366873 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
CAPN8-202ENST00000366873 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
CAPN8-202ENST00000366873 STRCQ7RTU9 1775 aa13.8□□□□□ -0.2
CAPN8-202ENST00000366873 YTHDC1Q96MU7 727 aaKnown RBP13.79□□□□□ -0.2
CAPN8-202ENST00000366873 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
CAPN8-202ENST00000366873 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
CAPN8-202ENST00000366873 LAMC1P11047 1609 aa13.77□□□□□ -0.2
CAPN8-202ENST00000366873 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
CAPN8-202ENST00000366873 PTPRUQ92729 1446 aa13.77□□□□□ -0.21
CAPN8-202ENST00000366873 TRAK1Q9UPV9 953 aa13.77□□□□□ -0.21
CAPN8-202ENST00000366873 USP47Q96K76 1375 aa13.76□□□□□ -0.21
CAPN8-202ENST00000366873 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
CAPN8-202ENST00000366873 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
CAPN8-202ENST00000366873 STK26Q9P289 416 aa13.76□□□□□ -0.21
CAPN8-202ENST00000366873 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
CAPN8-202ENST00000366873 ST20-MTHFSA0A0A6YYL1 179 aa13.75□□□□□ -0.21
CAPN8-202ENST00000366873 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
CAPN8-202ENST00000366873 ABCC11Q96J66 1382 aa13.75□□□□□ -0.21
CAPN8-202ENST00000366873 LRPPRCP42704 1394 aaKnown RBP13.74□□□□□ -0.21
CAPN8-202ENST00000366873 ZNF316A6NFI3 1004 aaPredicted RBP13.74□□□□□ -0.21
CAPN8-202ENST00000366873 DIP2AQ14689 1571 aa13.74□□□□□ -0.21
CAPN8-202ENST00000366873 AMOTL2Q9Y2J4 779 aa13.74□□□□□ -0.21
CAPN8-202ENST00000366873 PIK3R4Q99570 1358 aa13.72□□□□□ -0.21
CAPN8-202ENST00000366873 TESK2Q96S53 571 aa13.72□□□□□ -0.21
CAPN8-202ENST00000366873 TECPR2O15040 1411 aa13.72□□□□□ -0.21
CAPN8-202ENST00000366873 KCNA6P17658 529 aa13.72□□□□□ -0.21
CAPN8-202ENST00000366873 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
CAPN8-202ENST00000366873 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
CAPN8-202ENST00000366873 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
CAPN8-202ENST00000366873 PLEKHH1Q9ULM0 1364 aa13.7□□□□□ -0.22
CAPN8-202ENST00000366873 C11orf95C9JLR9 678 aaPredicted RBP13.7□□□□□ -0.22
CAPN8-202ENST00000366873 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
CAPN8-202ENST00000366873 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
CAPN8-202ENST00000366873 CHD2O14647 1828 aaKnown RBP13.68□□□□□ -0.22
CAPN8-202ENST00000366873 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
CAPN8-202ENST00000366873 ARHGEF28Q8N1W1 1705 aaKnown RBP13.68□□□□□ -0.22
CAPN8-202ENST00000366873 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
CAPN8-202ENST00000366873 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
CAPN8-202ENST00000366873 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
CAPN8-202ENST00000366873 XRN1Q8IZH2 1706 aaKnown RBP13.67□□□□□ -0.22
CAPN8-202ENST00000366873 MIER1Q8N108 512 aa13.67□□□□□ -0.22
CAPN8-202ENST00000366873 EIF3AQ14152 1382 aaKnown RBP13.67□□□□□ -0.22
CAPN8-202ENST00000366873 FAM135BQ49AJ0 1406 aa13.67□□□□□ -0.22
CAPN8-202ENST00000366873 CPS1P31327 1500 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms