RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
CDC42BPA-203ENST00000366766 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
CDC42BPA-203ENST00000366766 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
CDC42BPA-203ENST00000366766 SPRYD3Q8NCJ5 442 aa14.81□□□□□ -0.04
CDC42BPA-203ENST00000366766 SOX12O15370 315 aa14.81□□□□□ -0.04
CDC42BPA-203ENST00000366766 DZIP1LQ8IYY4 767 aaKnown RBP14.81□□□□□ -0.04
CDC42BPA-203ENST00000366766 KIF14Q15058 1648 aa14.81□□□□□ -0.04
CDC42BPA-203ENST00000366766 TRAK1Q9UPV9 953 aa14.8□□□□□ -0.04
CDC42BPA-203ENST00000366766 TPRNQ4KMQ1 711 aa14.8□□□□□ -0.04
CDC42BPA-203ENST00000366766 WWC1Q8IX03 1113 aa14.8□□□□□ -0.04
CDC42BPA-203ENST00000366766 CTTNBP2Q8WZ74 1663 aa14.8□□□□□ -0.04
CDC42BPA-203ENST00000366766 PCF11O94913 1555 aaKnown RBP14.8□□□□□ -0.04
CDC42BPA-203ENST00000366766 APBB1O00213 710 aa14.79□□□□□ -0.04
CDC42BPA-203ENST00000366766 GNAI1P63096 354 aa14.79□□□□□ -0.04
CDC42BPA-203ENST00000366766 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
CDC42BPA-203ENST00000366766 CSB-PGBD3P0DP91 1061 aa14.79□□□□□ -0.04
CDC42BPA-203ENST00000366766 CLUAP1Q96AJ1 413 aa14.79□□□□□ -0.04
CDC42BPA-203ENST00000366766 GZF1Q9H116 711 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPA-203ENST00000366766 HSP90AB4PQ58FF6 505 aa14.78□□□□□ -0.04
CDC42BPA-203ENST00000366766 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
CDC42BPA-203ENST00000366766 KAT6BQ8WYB5 2073 aa14.77□□□□□ -0.04
CDC42BPA-203ENST00000366766 NUCB2P80303 420 aa14.77□□□□□ -0.04
CDC42BPA-203ENST00000366766 ZKSCAN1P17029 563 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPA-203ENST00000366766 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.05
CDC42BPA-203ENST00000366766 TAF7LQ5H9L4 462 aa14.77□□□□□ -0.05
CDC42BPA-203ENST00000366766 HSP90B1P14625 803 aaKnown RBP14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 CRBNQ96SW2 442 aa14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 DAPK1P53355 1430 aa14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 TMX4Q9H1E5 349 aaPredicted RBP14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 CHMP5Q9NZZ3 219 aa14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 SLC4A10Q6U841 1118 aa14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 EPRSP07814 1512 aaKnown RBP14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.76□□□□□ -0.05
CDC42BPA-203ENST00000366766 RNF20Q5VTR2 975 aa14.75□□□□□ -0.05
CDC42BPA-203ENST00000366766 ANKRD45Q5TZF3 282 aa14.75□□□□□ -0.05
CDC42BPA-203ENST00000366766 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 C1orf141Q5JVX7 400 aa14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 CPLX2Q6PUV4 134 aaKnown RBP14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 GOLGA6L1Q8N7Z2 621 aa14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 PDE3AQ14432 1141 aa14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 EXOC6Q8TAG9 804 aa14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 DIAPH3Q9NSV4 1193 aa14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 INTS3Q68E01 1043 aaKnown RBP14.74□□□□□ -0.05
CDC42BPA-203ENST00000366766 APAF1O14727 1248 aa14.73□□□□□ -0.05
CDC42BPA-203ENST00000366766 KIAA0586Q9BVV6 1533 aa14.73□□□□□ -0.05
CDC42BPA-203ENST00000366766 DDX58O95786 925 aaKnown RBP14.73□□□□□ -0.05
CDC42BPA-203ENST00000366766 ISY1Q9ULR0 285 aaKnown RBP14.73□□□□□ -0.05
CDC42BPA-203ENST00000366766 TPM3P06753 285 aa14.73□□□□□ -0.05
CDC42BPA-203ENST00000366766 DDX49Q9Y6V7 483 aaKnown RBP14.73□□□□□ -0.05
CDC42BPA-203ENST00000366766 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
CDC42BPA-203ENST00000366766 TEFQ10587 303 aa14.72□□□□□ -0.05
CDC42BPA-203ENST00000366766 ANKRD30BQ9BXX2 1392 aa14.72□□□□□ -0.05
CDC42BPA-203ENST00000366766 ZNF428Q96B54 188 aa14.72□□□□□ -0.05
CDC42BPA-203ENST00000366766 AKNAQ7Z591 1439 aa14.71□□□□□ -0.05
CDC42BPA-203ENST00000366766 GOLGA6L19H0YKK7 550 aa14.71□□□□□ -0.05
CDC42BPA-203ENST00000366766 HOOK1Q9UJC3 728 aaKnown RBP14.71□□□□□ -0.05
CDC42BPA-203ENST00000366766 H3BQV1 296 aa14.71□□□□□ -0.06
CDC42BPA-203ENST00000366766 MCM2P49736 904 aa14.71□□□□□ -0.06
CDC42BPA-203ENST00000366766 IFFO2Q5TF58 517 aa14.71□□□□□ -0.06
CDC42BPA-203ENST00000366766 ERC2O15083 957 aa14.7□□□□□ -0.06
CDC42BPA-203ENST00000366766 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
CDC42BPA-203ENST00000366766 COG6Q9Y2V7 657 aa14.7□□□□□ -0.06
CDC42BPA-203ENST00000366766 CHMP3Q9Y3E7 222 aa14.7□□□□□ -0.06
CDC42BPA-203ENST00000366766 RIPK4P57078 832 aa14.7□□□□□ -0.06
CDC42BPA-203ENST00000366766 TPM1P09493 284 aa14.69□□□□□ -0.06
CDC42BPA-203ENST00000366766 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
CDC42BPA-203ENST00000366766 SF3A1Q15459 793 aaKnown RBP14.69□□□□□ -0.06
CDC42BPA-203ENST00000366766 RRP7AQ9Y3A4 280 aaKnown RBP14.68□□□□□ -0.06
CDC42BPA-203ENST00000366766 C9orf78Q9NZ63 289 aaPredicted RBP14.68□□□□□ -0.06
CDC42BPA-203ENST00000366766 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
CDC42BPA-203ENST00000366766 RPGRIP1LQ68CZ1 1315 aa14.68□□□□□ -0.06
CDC42BPA-203ENST00000366766 NAIPQ13075 1403 aa14.68□□□□□ -0.06
CDC42BPA-203ENST00000366766 MTERF4Q7Z6M4 381 aaKnown RBP14.67□□□□□ -0.06
CDC42BPA-203ENST00000366766 FAM184AQ8NB25 1140 aa14.67□□□□□ -0.06
CDC42BPA-203ENST00000366766 TSR1Q2NL82 804 aaKnown RBP14.67□□□□□ -0.06
CDC42BPA-203ENST00000366766 PDIA4P13667 645 aaKnown RBP14.67□□□□□ -0.06
CDC42BPA-203ENST00000366766 NESP48681 1621 aa14.67□□□□□ -0.06
CDC42BPA-203ENST00000366766 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
CDC42BPA-203ENST00000366766 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
CDC42BPA-203ENST00000366766 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.66□□□□□ -0.06
CDC42BPA-203ENST00000366766 ERBINQ96RT1 1412 aa14.66□□□□□ -0.06
CDC42BPA-203ENST00000366766 TTC5Q8N0Z6 440 aa14.66□□□□□ -0.06
CDC42BPA-203ENST00000366766 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
CDC42BPA-203ENST00000366766 DHX8Q14562 1220 aaKnown RBP14.65□□□□□ -0.06
CDC42BPA-203ENST00000366766 BECN2A8MW95 431 aa14.65□□□□□ -0.06
CDC42BPA-203ENST00000366766 C22orf23Q9BZE7 217 aa14.65□□□□□ -0.06
CDC42BPA-203ENST00000366766 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
CDC42BPA-203ENST00000366766 NOC3LQ8WTT2 800 aaKnown RBP14.65□□□□□ -0.06
CDC42BPA-203ENST00000366766 GPS2Q13227 327 aa14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 HSP90AA2PQ14568 343 aaPredicted RBP14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 PLIN1O60240 522 aa14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 CDC45O75419 566 aa14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 MINK1Q8N4C8 1332 aaPredicted RBP14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 CCDC70Q6NSX1 233 aa14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 PDCP20941 246 aa14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 SYNE3Q6ZMZ3 975 aa14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 RILPL2Q969X0 211 aa14.64□□□□□ -0.07
CDC42BPA-203ENST00000366766 ZNF644Q9H582 1327 aaPredicted RBP14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 AKAP17AQ02040 695 aaKnown RBP14.63□□□□□ -0.07
CDC42BPA-203ENST00000366766 ANKRD20A12PQ8NF67 263 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms