RNA–Protein interactions for RNA: ENST00000364019.1

RNU4-13P-201, Transcript of RNA, U4 small nuclear 13, pseudogene, humanhuman

BASIC

Gene RNU4-13P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-13P-201ENST00000364019 HPS5Q9UPZ3 1129 aa4.62□□□□□ -1.67
RNU4-13P-201ENST00000364019 PTPN5P54829 565 aa4.61□□□□□ -1.67
RNU4-13P-201ENST00000364019 FAM161AQ3B820 660 aa4.61□□□□□ -1.67
RNU4-13P-201ENST00000364019 PHOX2BQ99453 314 aa4.61□□□□□ -1.67
RNU4-13P-201ENST00000364019 ZC3H15Q8WU90 426 aaKnown RBP4.6□□□□□ -1.67
RNU4-13P-201ENST00000364019 TMUB1Q9BVT8 246 aa4.6□□□□□ -1.67
RNU4-13P-201ENST00000364019 DAXXQ9UER7 740 aaPredicted RBP4.6□□□□□ -1.67
RNU4-13P-201ENST00000364019 HDGFP51858 240 aaKnown RBP4.59□□□□□ -1.67
RNU4-13P-201ENST00000364019 PPP4CP60510 307 aa4.59□□□□□ -1.67
RNU4-13P-201ENST00000364019 PLA2G2EQ9NZK7 142 aa4.59□□□□□ -1.67
RNU4-13P-201ENST00000364019 SLC10A3P09131 477 aa4.58□□□□□ -1.68
RNU4-13P-201ENST00000364019 APLP1P51693 650 aa4.58□□□□□ -1.68
RNU4-13P-201ENST00000364019 TJAP1Q5JTD0 557 aa4.58□□□□□ -1.68
RNU4-13P-201ENST00000364019 CCDC102AQ96A19 550 aa4.58□□□□□ -1.68
RNU4-13P-201ENST00000364019 BCANQ96GW7 911 aa4.58□□□□□ -1.68
RNU4-13P-201ENST00000364019 PRR14Q9BWN1 585 aa4.58□□□□□ -1.68
RNU4-13P-201ENST00000364019 AMHR2Q16671 573 aa4.57□□□□□ -1.68
RNU4-13P-201ENST00000364019 A0A0G2JS52 829 aa4.56□□□□□ -1.68
RNU4-13P-201ENST00000364019 ACTN4O43707 911 aaKnown RBP4.56□□□□□ -1.68
RNU4-13P-201ENST00000364019 RGS20O76081 388 aa4.56□□□□□ -1.68
RNU4-13P-201ENST00000364019 SLC4A3P48751 1232 aa4.56□□□□□ -1.68
RNU4-13P-201ENST00000364019 IL21Q9HBE4 155 aa4.55□□□□□ -1.68
RNU4-13P-201ENST00000364019 CD46P15529 392 aa4.54□□□□□ -1.68
RNU4-13P-201ENST00000364019 KCNC4Q03721 635 aa4.54□□□□□ -1.68
RNU4-13P-201ENST00000364019 KMT5BQ4FZB7 885 aa4.54□□□□□ -1.68
RNU4-13P-201ENST00000364019 SULF1Q8IWU6 871 aa4.54□□□□□ -1.68
RNU4-13P-201ENST00000364019 MTRQ99707 1265 aa4.54□□□□□ -1.68
RNU4-13P-201ENST00000364019 CFHP08603 1231 aa4.53□□□□□ -1.68
RNU4-13P-201ENST00000364019 CLCN1P35523 988 aa4.53□□□□□ -1.68
RNU4-13P-201ENST00000364019 GCGRP47871 477 aa4.53□□□□□ -1.68
RNU4-13P-201ENST00000364019 RSPH4AQ5TD94 716 aa4.53□□□□□ -1.68
RNU4-13P-201ENST00000364019 GPCPD1Q9NPB8 672 aa4.53□□□□□ -1.68
RNU4-13P-201ENST00000364019 FAM217BQ9NTX9 383 aaPredicted RBP4.53□□□□□ -1.68
RNU4-13P-201ENST00000364019 NLRP7Q8WX94 980 aa4.52□□□□□ -1.69
RNU4-13P-201ENST00000364019 AK7Q96M32 723 aa4.52□□□□□ -1.69
RNU4-13P-201ENST00000364019 REPIN1Q9BWE0 567 aaKnown RBP4.52□□□□□ -1.69
RNU4-13P-201ENST00000364019 TRIM66O15016 1216 aa4.51□□□□□ -1.69
RNU4-13P-201ENST00000364019 RNF40O75150 1001 aa4.51□□□□□ -1.69
RNU4-13P-201ENST00000364019 ZPR1O75312 459 aa4.51□□□□□ -1.69
RNU4-13P-201ENST00000364019 MDM2Q00987 491 aaPredicted RBP4.51□□□□□ -1.69
RNU4-13P-201ENST00000364019 MORN1Q5T089 497 aa4.51□□□□□ -1.69
RNU4-13P-201ENST00000364019 SALL2Q9Y467 1007 aaPredicted RBP4.51□□□□□ -1.69
RNU4-13P-201ENST00000364019 PCDHB3Q9Y5E6 796 aa4.51□□□□□ -1.69
RNU4-13P-201ENST00000364019 DDX11L8A8MPP1 907 aa4.5□□□□□ -1.69
RNU4-13P-201ENST00000364019 USP46P62068 366 aa4.5□□□□□ -1.69
RNU4-13P-201ENST00000364019 BLOC1S3Q6QNY0 202 aa4.5□□□□□ -1.69
RNU4-13P-201ENST00000364019 ZNF516Q92618 1163 aa4.5□□□□□ -1.69
RNU4-13P-201ENST00000364019 THAP11Q96EK4 314 aa4.5□□□□□ -1.69
RNU4-13P-201ENST00000364019 NR1I2O75469 434 aa4.49□□□□□ -1.69
RNU4-13P-201ENST00000364019 ATP6V1AP38606 617 aa4.49□□□□□ -1.69
RNU4-13P-201ENST00000364019 PARP9Q8IXQ6 854 aa4.49□□□□□ -1.69
RNU4-13P-201ENST00000364019 KRI1Q8N9T8 703 aaKnown RBP4.49□□□□□ -1.69
RNU4-13P-201ENST00000364019 ADH1BP00325 375 aa4.48□□□□□ -1.69
RNU4-13P-201ENST00000364019 FUT2Q10981 343 aa4.48□□□□□ -1.69
RNU4-13P-201ENST00000364019 SCUBE3Q8IX30 993 aa4.48□□□□□ -1.69
RNU4-13P-201ENST00000364019 RDH13Q8NBN7 331 aa4.48□□□□□ -1.69
RNU4-13P-201ENST00000364019 KDM4AO75164 1064 aa4.47□□□□□ -1.69
RNU4-13P-201ENST00000364019 SSTR3P32745 418 aaPredicted RBP4.47□□□□□ -1.69
RNU4-13P-201ENST00000364019 GJA5P36382 358 aa4.47□□□□□ -1.69
RNU4-13P-201ENST00000364019 COPS2P61201 443 aa4.47□□□□□ -1.69
RNU4-13P-201ENST00000364019 PDE4DQ08499 809 aa4.47□□□□□ -1.69
RNU4-13P-201ENST00000364019 GIGYF2Q6Y7W6 1299 aaKnown RBP4.47□□□□□ -1.69
RNU4-13P-201ENST00000364019 HOXA2O43364 376 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 GRIPAP1Q4V328 841 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 MSS51Q4VC12 460 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 PPP1R18Q6NYC8 613 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 BRICD5Q6PL45 260 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 NKX2-3Q8TAU0 364 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 SLC24A3Q9HC58 644 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 SLC27A5Q9Y2P5 690 aa4.46□□□□□ -1.7
RNU4-13P-201ENST00000364019 TLL1O43897 1013 aa4.45□□□□□ -1.7
RNU4-13P-201ENST00000364019 MS4A1P11836 297 aa4.45□□□□□ -1.7
RNU4-13P-201ENST00000364019 PUS10Q3MIT2 529 aaKnown RBP4.45□□□□□ -1.7
RNU4-13P-201ENST00000364019 TTLL12Q14166 644 aaPredicted RBP4.44□□□□□ -1.7
RNU4-13P-201ENST00000364019 TUSC1Q2TAM9 212 aa4.44□□□□□ -1.7
RNU4-13P-201ENST00000364019 Q3C1V9 767 aa4.44□□□□□ -1.7
RNU4-13P-201ENST00000364019 FAM160A2Q8N612 972 aaPredicted RBP4.44□□□□□ -1.7
RNU4-13P-201ENST00000364019 ANKLE1Q8NAG6 615 aa4.44□□□□□ -1.7
RNU4-13P-201ENST00000364019 SPIRE2Q8WWL2 714 aa4.44□□□□□ -1.7
RNU4-13P-201ENST00000364019 V9GY48 417 aaPredicted RBP4.44□□□□□ -1.7
RNU4-13P-201ENST00000364019 RNF223E7ERA6 249 aa4.43□□□□□ -1.7
RNU4-13P-201ENST00000364019 FMNL1O95466 1100 aaPredicted RBP4.43□□□□□ -1.7
RNU4-13P-201ENST00000364019 GGCXP38435 758 aa4.43□□□□□ -1.7
RNU4-13P-201ENST00000364019 MMP16P51512 607 aa4.43□□□□□ -1.7
RNU4-13P-201ENST00000364019 DIXDC1Q155Q3 683 aa4.43□□□□□ -1.7
RNU4-13P-201ENST00000364019 EMID1Q96A84 441 aaPredicted RBP4.43□□□□□ -1.7
RNU4-13P-201ENST00000364019 SPSB2Q99619 263 aa4.43□□□□□ -1.7
RNU4-13P-201ENST00000364019 RNF19BQ6ZMZ0 732 aa4.42□□□□□ -1.7
RNU4-13P-201ENST00000364019 BEGAINQ9BUH8 593 aa4.42□□□□□ -1.7
RNU4-13P-201ENST00000364019 SLC6A16Q9GZN6 736 aa4.42□□□□□ -1.7
RNU4-13P-201ENST00000364019 PCDHGC3Q9UN70 934 aa4.42□□□□□ -1.7
RNU4-13P-201ENST00000364019 SPTLC1O15269 473 aa4.41□□□□□ -1.7
RNU4-13P-201ENST00000364019 DXOO77932 396 aaKnown RBP4.41□□□□□ -1.7
RNU4-13P-201ENST00000364019 S1PR4O95977 384 aa4.41□□□□□ -1.7
RNU4-13P-201ENST00000364019 HLA-CQ95604 372 aa4.41□□□□□ -1.7
RNU4-13P-201ENST00000364019 MOXD2PA6NHM9 499 aa4.4□□□□□ -1.71
RNU4-13P-201ENST00000364019 RSBN1LQ6PCB5 846 aaPredicted RBP4.4□□□□□ -1.71
RNU4-13P-201ENST00000364019 NUTM1Q86Y26 1132 aa4.4□□□□□ -1.71
RNU4-13P-201ENST00000364019 USB1Q9BQ65 265 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms