RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 MYT1LQ9UL68 1186 aa7.69□□□□□ -1.18
RNU4-1-201ENST00000363925 DDX11L8A8MPP1 907 aa7.68□□□□□ -1.18
RNU4-1-201ENST00000363925 PDE4DQ08499 809 aa7.68□□□□□ -1.18
RNU4-1-201ENST00000363925 RDH13Q8NBN7 331 aa7.68□□□□□ -1.18
RNU4-1-201ENST00000363925 PHOX2BQ99453 314 aa7.68□□□□□ -1.18
RNU4-1-201ENST00000363925 CLCN1P35523 988 aa7.67□□□□□ -1.18
RNU4-1-201ENST00000363925 BCAMP50895 628 aa7.67□□□□□ -1.18
RNU4-1-201ENST00000363925 PTPN5P54829 565 aa7.66□□□□□ -1.18
RNU4-1-201ENST00000363925 RSPH4AQ5TD94 716 aa7.66□□□□□ -1.18
RNU4-1-201ENST00000363925 SLF2Q8IX21 1173 aa7.66□□□□□ -1.18
RNU4-1-201ENST00000363925 GPCPD1Q9NPB8 672 aa7.66□□□□□ -1.18
RNU4-1-201ENST00000363925 SPNS2Q8IVW8 549 aa7.65□□□□□ -1.18
RNU4-1-201ENST00000363925 TMEM134Q9H6X4 195 aa7.65□□□□□ -1.18
RNU4-1-201ENST00000363925 HPS5Q9UPZ3 1129 aa7.65□□□□□ -1.18
RNU4-1-201ENST00000363925 PPP4CP60510 307 aa7.64□□□□□ -1.19
RNU4-1-201ENST00000363925 GIGYF2Q6Y7W6 1299 aaKnown RBP7.64□□□□□ -1.19
RNU4-1-201ENST00000363925 RNF166Q96A37 237 aaPredicted RBP7.64□□□□□ -1.19
RNU4-1-201ENST00000363925 GPBP1L1Q9HC44 474 aaPredicted RBP7.64□□□□□ -1.19
RNU4-1-201ENST00000363925 DAXXQ9UER7 740 aaPredicted RBP7.64□□□□□ -1.19
RNU4-1-201ENST00000363925 AMHR2Q16671 573 aa7.63□□□□□ -1.19
RNU4-1-201ENST00000363925 SULF1Q8IWU6 871 aa7.63□□□□□ -1.19
RNU4-1-201ENST00000363925 PARP9Q8IXQ6 854 aa7.63□□□□□ -1.19
RNU4-1-201ENST00000363925 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
RNU4-1-201ENST00000363925 SOWAHBA6NEL2 793 aa7.61□□□□□ -1.19
RNU4-1-201ENST00000363925 SSTR3P32745 418 aaPredicted RBP7.61□□□□□ -1.19
RNU4-1-201ENST00000363925 THSD4Q6ZMP0 1018 aa7.61□□□□□ -1.19
RNU4-1-201ENST00000363925 REPIN1Q9BWE0 567 aaKnown RBP7.61□□□□□ -1.19
RNU4-1-201ENST00000363925 NECTIN2Q92692 538 aa7.6□□□□□ -1.19
RNU4-1-201ENST00000363925 KDM4CQ9H3R0 1056 aa7.6□□□□□ -1.19
RNU4-1-201ENST00000363925 TSR3Q9UJK0 312 aaKnown RBP7.6□□□□□ -1.19
RNU4-1-201ENST00000363925 CFHP08603 1231 aa7.59□□□□□ -1.19
RNU4-1-201ENST00000363925 BRPF1P55201 1214 aaPredicted RBP7.59□□□□□ -1.19
RNU4-1-201ENST00000363925 KMT5BQ4FZB7 885 aa7.59□□□□□ -1.19
RNU4-1-201ENST00000363925 NUTM1Q86Y26 1132 aa7.58□□□□□ -1.2
RNU4-1-201ENST00000363925 PLSCR2Q9NRY7 297 aa7.58□□□□□ -1.2
RNU4-1-201ENST00000363925 FAM217BQ9NTX9 383 aaPredicted RBP7.58□□□□□ -1.2
RNU4-1-201ENST00000363925 WBP1LQ9NX94 342 aa7.58□□□□□ -1.2
RNU4-1-201ENST00000363925 SLC10A3P09131 477 aa7.57□□□□□ -1.2
RNU4-1-201ENST00000363925 MMRN1Q13201 1228 aa7.57□□□□□ -1.2
RNU4-1-201ENST00000363925 BEGAINQ9BUH8 593 aa7.57□□□□□ -1.2
RNU4-1-201ENST00000363925 MS4A1P11836 297 aa7.56□□□□□ -1.2
RNU4-1-201ENST00000363925 CD46P15529 392 aa7.55□□□□□ -1.2
RNU4-1-201ENST00000363925 IL27Q8NEV9 243 aa7.55□□□□□ -1.2
RNU4-1-201ENST00000363925 TMUB1Q9BVT8 246 aa7.55□□□□□ -1.2
RNU4-1-201ENST00000363925 PRR14Q9BWN1 585 aa7.54□□□□□ -1.2
RNU4-1-201ENST00000363925 HCSTQ9UBK5 93 aa7.54□□□□□ -1.2
RNU4-1-201ENST00000363925 FAM117AQ9C073 453 aa7.53□□□□□ -1.2
RNU4-1-201ENST00000363925 KDM4AO75164 1064 aa7.52□□□□□ -1.21
RNU4-1-201ENST00000363925 GCGRP47871 477 aa7.52□□□□□ -1.21
RNU4-1-201ENST00000363925 APLP1P51693 650 aa7.52□□□□□ -1.21
RNU4-1-201ENST00000363925 DDRGK1Q96HY6 314 aa7.52□□□□□ -1.21
RNU4-1-201ENST00000363925 PCDHB3Q9Y5E6 796 aa7.52□□□□□ -1.21
RNU4-1-201ENST00000363925 COPS2P61201 443 aa7.51□□□□□ -1.21
RNU4-1-201ENST00000363925 PUS10Q3MIT2 529 aaKnown RBP7.51□□□□□ -1.21
RNU4-1-201ENST00000363925 GRIPAP1Q4V328 841 aa7.51□□□□□ -1.21
RNU4-1-201ENST00000363925 FUT2Q10981 343 aa7.5□□□□□ -1.21
RNU4-1-201ENST00000363925 ACTN4O43707 911 aaKnown RBP7.49□□□□□ -1.21
RNU4-1-201ENST00000363925 CSPP1Q1MSJ5 1256 aa7.49□□□□□ -1.21
RNU4-1-201ENST00000363925 NYAP1Q6ZVC0 841 aa7.49□□□□□ -1.21
RNU4-1-201ENST00000363925 TBC1D2Q9BYX2 928 aa7.49□□□□□ -1.21
RNU4-1-201ENST00000363925 ATP6V1AP38606 617 aa7.48□□□□□ -1.21
RNU4-1-201ENST00000363925 DIXDC1Q155Q3 683 aa7.48□□□□□ -1.21
RNU4-1-201ENST00000363925 SPIRE2Q8WWL2 714 aa7.48□□□□□ -1.21
RNU4-1-201ENST00000363925 POLR3EQ9NVU0 708 aa7.48□□□□□ -1.21
RNU4-1-201ENST00000363925 NDUFV2P19404 249 aa7.47□□□□□ -1.21
RNU4-1-201ENST00000363925 USP46P62068 366 aa7.47□□□□□ -1.21
RNU4-1-201ENST00000363925 BLOC1S3Q6QNY0 202 aa7.47□□□□□ -1.21
RNU4-1-201ENST00000363925 RSPH6AQ9H0K4 717 aa7.47□□□□□ -1.21
RNU4-1-201ENST00000363925 GUCA2AQ02747 115 aa7.46□□□□□ -1.22
RNU4-1-201ENST00000363925 HLA-CQ95604 372 aa7.46□□□□□ -1.22
RNU4-1-201ENST00000363925 MTRQ99707 1265 aa7.46□□□□□ -1.22
RNU4-1-201ENST00000363925 MOXD2PA6NHM9 499 aa7.45□□□□□ -1.22
RNU4-1-201ENST00000363925 HOXA2O43364 376 aa7.45□□□□□ -1.22
RNU4-1-201ENST00000363925 NR1I2O75469 434 aa7.45□□□□□ -1.22
RNU4-1-201ENST00000363925 PLEKHG3A1L390 1219 aa7.44□□□□□ -1.22
RNU4-1-201ENST00000363925 FDX1P10109 184 aa7.44□□□□□ -1.22
RNU4-1-201ENST00000363925 RIC3Q7Z5B4 369 aa7.44□□□□□ -1.22
RNU4-1-201ENST00000363925 IL21Q9HBE4 155 aa7.44□□□□□ -1.22
RNU4-1-201ENST00000363925 NUTM2BA6NNL0 878 aaPredicted RBP7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 NUTM2EB1AL46 878 aaPredicted RBP7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 C6orf229H3BNL8 230 aa7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 CLK2P49760 499 aaKnown RBP7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 NUTM2DQ5VT03 806 aaPredicted RBP7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 MYSM1Q5VVJ2 828 aa7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 NUTM2AQ8IVF1 878 aaPredicted RBP7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
RNU4-1-201ENST00000363925 KCNC4Q03721 635 aa7.42□□□□□ -1.22
RNU4-1-201ENST00000363925 MORN1Q5T089 497 aa7.42□□□□□ -1.22
RNU4-1-201ENST00000363925 TSC1Q92574 1164 aa7.42□□□□□ -1.22
RNU4-1-201ENST00000363925 SLC27A5Q9Y2P5 690 aa7.42□□□□□ -1.22
RNU4-1-201ENST00000363925 Q3C1V9 767 aa7.41□□□□□ -1.22
RNU4-1-201ENST00000363925 SH3D19Q5HYK7 790 aa7.41□□□□□ -1.22
RNU4-1-201ENST00000363925 RSBN1LQ6PCB5 846 aaPredicted RBP7.41□□□□□ -1.22
RNU4-1-201ENST00000363925 SCUBE3Q8IX30 993 aa7.41□□□□□ -1.22
RNU4-1-201ENST00000363925 ZNF516Q92618 1163 aa7.41□□□□□ -1.22
RNU4-1-201ENST00000363925 TLL1O43897 1013 aa7.4□□□□□ -1.22
RNU4-1-201ENST00000363925 FMNL1O95466 1100 aaPredicted RBP7.4□□□□□ -1.22
RNU4-1-201ENST00000363925 SKIV2LQ15477 1246 aaKnown RBP7.4□□□□□ -1.22
RNU4-1-201ENST00000363925 SYMPKQ92797 1274 aaKnown RBP7.4□□□□□ -1.22
RNU4-1-201ENST00000363925 LIMD1Q9UGP4 676 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms