RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 RBM25P49756 843 aaKnown RBP6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 TSR1Q2NL82 804 aaKnown RBP6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 FOXD4L5Q5VV16 416 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 ASTLQ6HA08 431 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 FOXD4L4Q8WXT5 416 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 LIMD1Q9UGP4 676 aa6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 PCDHGA10Q9Y5H3 936 aa6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 ADGRG1Q9Y653 693 aa6.11□□□□□ -1.43
RNU6-1249P-201ENST00000363237 E9PSI1 815 aa6.1□□□□□ -1.43
RNU6-1249P-201ENST00000363237 ST18O60284 1047 aa6.1□□□□□ -1.43
RNU6-1249P-201ENST00000363237 CSB-PGBD3P0DP91 1061 aa6.1□□□□□ -1.43
RNU6-1249P-201ENST00000363237 ATN1P54259 1190 aaPredicted RBP6.1□□□□□ -1.43
RNU6-1249P-201ENST00000363237 RBM27Q9P2N5 1060 aaKnown RBP6.1□□□□□ -1.43
RNU6-1249P-201ENST00000363237 SHROOM4Q9ULL8 1493 aa6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 SPTLC1O15269 473 aa6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 GJA5P36382 358 aa6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 FAM161AQ3B820 660 aa6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 FBXO31Q5XUX0 539 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 PADI6Q6TGC4 694 aa6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 RBM46Q8TBY0 533 aaKnown RBP6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 SPIRE2Q8WWL2 714 aa6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 NLRP7Q8WX94 980 aa6.09□□□□□ -1.43
RNU6-1249P-201ENST00000363237 POM121CA8CG34 1229 aa6.08□□□□□ -1.44
RNU6-1249P-201ENST00000363237 TTC13Q8NBP0 860 aa6.08□□□□□ -1.44
RNU6-1249P-201ENST00000363237 TBC1D2BQ9UPU7 963 aa6.08□□□□□ -1.44
RNU6-1249P-201ENST00000363237 AMOTL2Q9Y2J4 779 aa6.08□□□□□ -1.44
RNU6-1249P-201ENST00000363237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.07□□□□□ -1.44
RNU6-1249P-201ENST00000363237 WASHC4Q2M389 1173 aa6.07□□□□□ -1.44
RNU6-1249P-201ENST00000363237 ZNF710Q8N1W2 664 aa6.07□□□□□ -1.44
RNU6-1249P-201ENST00000363237 JPH4Q96JJ6 628 aa6.07□□□□□ -1.44
RNU6-1249P-201ENST00000363237 ATMINO43313 823 aaPredicted RBP6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 LILRB3O75022 631 aa6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 AP1G2O75843 785 aa6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 HDGFL1Q5TGJ6 251 aa6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 RSBN1LQ6PCB5 846 aaPredicted RBP6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 NUTM1Q86Y26 1132 aa6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 SULF1Q8IWU6 871 aa6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 NDUFB9Q9Y6M9 179 aa6.06□□□□□ -1.44
RNU6-1249P-201ENST00000363237 CD46P15529 392 aa6.05□□□□□ -1.44
RNU6-1249P-201ENST00000363237 C6orf132Q5T0Z8 1188 aa6.05□□□□□ -1.44
RNU6-1249P-201ENST00000363237 ZNF428Q96B54 188 aa6.05□□□□□ -1.44
RNU6-1249P-201ENST00000363237 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 LOC105371045A0A1W2PR82 267 aa6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 USP17L8P0C7I0 530 aa6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 RFX1P22670 979 aa6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 SRPK2P78362 688 aaKnown RBP6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 CCDC27Q2M243 656 aa6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 CFAP70Q5T0N1 1121 aa6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 PRPF38BQ5VTL8 546 aaKnown RBP6.04□□□□□ -1.44
RNU6-1249P-201ENST00000363237 MOXD2PA6NHM9 499 aa6.03□□□□□ -1.44
RNU6-1249P-201ENST00000363237 CSPP1Q1MSJ5 1256 aa6.03□□□□□ -1.44
RNU6-1249P-201ENST00000363237 PPP1R12CQ9BZL4 782 aa6.03□□□□□ -1.44
RNU6-1249P-201ENST00000363237 NUTM2BA6NNL0 878 aaPredicted RBP6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 NUTM2EB1AL46 878 aaPredicted RBP6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 IGSF3O75054 1194 aa6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 PRSS12P56730 875 aa6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 QPCTQ16769 361 aa6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 NUTM2DQ5VT03 806 aaPredicted RBP6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 NUTM2AQ8IVF1 878 aaPredicted RBP6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 ZDHHC16Q969W1 377 aa6.02□□□□□ -1.45
RNU6-1249P-201ENST00000363237 RCCD1A6NED2 376 aa6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 SEC24BO95487 1268 aa6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 FOSBP53539 338 aa6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 RTL5Q5HYW3 569 aaPredicted RBP6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 SND1Q7KZF4 910 aaKnown RBP eCLIP6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 ADAMTS19Q8TE59 1207 aa6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 GJD4Q96KN9 370 aaPredicted RBP6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 VRTNQ9H8Y1 702 aa6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 PCDHGA4Q9Y5G9 962 aa6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 IVNS1ABPQ9Y6Y0 642 aa6.01□□□□□ -1.45
RNU6-1249P-201ENST00000363237 CDCA7LQ96GN5 454 aa6□□□□□ -1.45
RNU6-1249P-201ENST00000363237 ZBTB3Q9H5J0 574 aa6□□□□□ -1.45
RNU6-1249P-201ENST00000363237 PCDHB15Q9Y5E8 787 aa6□□□□□ -1.45
RNU6-1249P-201ENST00000363237 POTEFA5A3E0 1075 aa5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 PALM3A6NDB9 673 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 ATG7O95352 703 aa5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 NDUFV2P19404 249 aa5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 LMOD1P29536 600 aaPredicted RBP5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 SOX11P35716 441 aa5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 C3orf67Q6ZVT6 689 aa5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 EYA1Q99502 592 aa5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 ALG2Q9H553 416 aa5.99□□□□□ -1.45
RNU6-1249P-201ENST00000363237 KDM4FA0A1W2PPD8 638 aa5.98□□□□□ -1.45
RNU6-1249P-201ENST00000363237 DDX11L8A8MPP1 907 aa5.98□□□□□ -1.45
RNU6-1249P-201ENST00000363237 B4GALNT3Q6L9W6 998 aa5.98□□□□□ -1.45
RNU6-1249P-201ENST00000363237 DNAJB2P25686 324 aa5.97□□□□□ -1.45
RNU6-1249P-201ENST00000363237 USP46P62068 366 aa5.97□□□□□ -1.45
RNU6-1249P-201ENST00000363237 ZNF454Q8N9F8 522 aa5.97□□□□□ -1.45
RNU6-1249P-201ENST00000363237 MYT1LQ9UL68 1186 aa5.97□□□□□ -1.45
RNU6-1249P-201ENST00000363237 TMEM88BA6NKF7 163 aa5.96□□□□□ -1.46
RNU6-1249P-201ENST00000363237 KDM4AO75164 1064 aa5.96□□□□□ -1.46
RNU6-1249P-201ENST00000363237 VAC14Q08AM6 782 aa5.96□□□□□ -1.46
RNU6-1249P-201ENST00000363237 CABLES1Q8TDN4 633 aa5.96□□□□□ -1.46
RNU6-1249P-201ENST00000363237 TFIP11Q9UBB9 837 aaKnown RBP5.96□□□□□ -1.46
RNU6-1249P-201ENST00000363237 GNEQ9Y223 722 aaKnown RBP5.96□□□□□ -1.46
RNU6-1249P-201ENST00000363237 CARNS1A5YM72 827 aa5.95□□□□□ -1.46
RNU6-1249P-201ENST00000363237 HELBQ8NG08 1087 aaPredicted RBP5.95□□□□□ -1.46
RNU6-1249P-201ENST00000363237 TRIM34Q9BYJ4 488 aa5.95□□□□□ -1.46
RNU6-1249P-201ENST00000363237 ADAM33Q9BZ11 813 aa5.95□□□□□ -1.46
RNU6-1249P-201ENST00000363237 COLQQ9Y215 455 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms