RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 ABCA8O94911 1581 aa11.64□□□□□ -0.55
CALD1-201ENST00000361675 ERCC6L2Q5T890 1561 aa11.64□□□□□ -0.55
CALD1-201ENST00000361675 DNTTIP2Q5QJE6 756 aaKnown RBP11.64□□□□□ -0.55
CALD1-201ENST00000361675 PANK2Q9BZ23 570 aa11.64□□□□□ -0.55
CALD1-201ENST00000361675 HDAC5Q9UQL6 1122 aa11.64□□□□□ -0.55
CALD1-201ENST00000361675 AKNAQ7Z591 1439 aa11.64□□□□□ -0.55
CALD1-201ENST00000361675 KIAA1211Q6ZU35 1233 aa11.64□□□□□ -0.55
CALD1-201ENST00000361675 IRX3P78415 501 aaPredicted RBP11.63□□□□□ -0.55
CALD1-201ENST00000361675 MYH16Q9H6N6 1097 aa11.63□□□□□ -0.55
CALD1-201ENST00000361675 NBPF8Q3BBV2 869 aa11.63□□□□□ -0.55
CALD1-201ENST00000361675 ROCK1Q13464 1354 aa11.62□□□□□ -0.55
CALD1-201ENST00000361675 NCOA1Q15788 1441 aa11.62□□□□□ -0.55
CALD1-201ENST00000361675 ANKRD30BQ9BXX2 1392 aa11.61□□□□□ -0.55
CALD1-201ENST00000361675 CLCN1P35523 988 aa11.61□□□□□ -0.55
CALD1-201ENST00000361675 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
CALD1-201ENST00000361675 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
CALD1-201ENST00000361675 PRDM4Q9UKN5 801 aa11.61□□□□□ -0.55
CALD1-201ENST00000361675 CHD1O14646 1710 aa11.61□□□□□ -0.55
CALD1-201ENST00000361675 PLEKHD1A6NEE1 506 aa11.61□□□□□ -0.55
CALD1-201ENST00000361675 HNRNPMP52272 730 aaKnown RBP eCLIP11.61□□□□□ -0.55
CALD1-201ENST00000361675 ABCC10Q5T3U5 1492 aa11.6□□□□□ -0.55
CALD1-201ENST00000361675 HSPA5P11021 654 aaKnown RBP11.6□□□□□ -0.55
CALD1-201ENST00000361675 BACH2Q9BYV9 841 aa11.6□□□□□ -0.55
CALD1-201ENST00000361675 PTPRGP23470 1445 aa11.6□□□□□ -0.55
CALD1-201ENST00000361675 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
CALD1-201ENST00000361675 PZPP20742 1482 aa11.6□□□□□ -0.55
CALD1-201ENST00000361675 CCDC184Q52MB2 194 aa11.59□□□□□ -0.55
CALD1-201ENST00000361675 ESPNB1AK53 854 aa11.59□□□□□ -0.55
CALD1-201ENST00000361675 CLGNO14967 610 aa11.59□□□□□ -0.55
CALD1-201ENST00000361675 TPM2P07951 284 aa11.59□□□□□ -0.55
CALD1-201ENST00000361675 KCTD17Q8N5Z5 321 aa11.59□□□□□ -0.55
CALD1-201ENST00000361675 ADCY10Q96PN6 1610 aa11.59□□□□□ -0.55
CALD1-201ENST00000361675 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
CALD1-201ENST00000361675 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
CALD1-201ENST00000361675 EXOC6Q8TAG9 804 aa11.58□□□□□ -0.56
CALD1-201ENST00000361675 R3HCC1Q9Y3T6 440 aaKnown RBP11.57□□□□□ -0.56
CALD1-201ENST00000361675 MPNDQ8N594 471 aa11.56□□□□□ -0.56
CALD1-201ENST00000361675 FOXD4L6Q3SYB3 417 aaPredicted RBP11.56□□□□□ -0.56
CALD1-201ENST00000361675 FOXD4L3Q6VB84 417 aaPredicted RBP11.56□□□□□ -0.56
CALD1-201ENST00000361675 ZNF830Q96NB3 372 aaPredicted RBP11.56□□□□□ -0.56
CALD1-201ENST00000361675 RPRD2Q5VT52 1461 aaKnown RBP11.55□□□□□ -0.56
CALD1-201ENST00000361675 TEX14Q8IWB6 1497 aa11.55□□□□□ -0.56
CALD1-201ENST00000361675 MSNP26038 577 aaKnown RBP11.55□□□□□ -0.56
CALD1-201ENST00000361675 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
CALD1-201ENST00000361675 PKD2Q13563 968 aa11.54□□□□□ -0.56
CALD1-201ENST00000361675 ITSN2Q9NZM3 1697 aa11.54□□□□□ -0.56
CALD1-201ENST00000361675 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
CALD1-201ENST00000361675 CROCC2H7BZ55 1655 aa11.53□□□□□ -0.56
CALD1-201ENST00000361675 FAM177A1Q8N128 213 aaPredicted RBP11.53□□□□□ -0.56
CALD1-201ENST00000361675 ADGRL2O95490 1459 aa11.52□□□□□ -0.56
CALD1-201ENST00000361675 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.56
CALD1-201ENST00000361675 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.57
CALD1-201ENST00000361675 MBD5Q9P267 1494 aa11.52□□□□□ -0.57
CALD1-201ENST00000361675 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
CALD1-201ENST00000361675 CDCA8Q53HL2 280 aa11.52□□□□□ -0.57
CALD1-201ENST00000361675 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
CALD1-201ENST00000361675 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
CALD1-201ENST00000361675 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
CALD1-201ENST00000361675 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
CALD1-201ENST00000361675 ADGBQ8N7X0 1667 aa11.5□□□□□ -0.57
CALD1-201ENST00000361675 CDC42BPBQ9Y5S2 1711 aa11.5□□□□□ -0.57
CALD1-201ENST00000361675 ANKRD30AQ9BXX3 1397 aa11.5□□□□□ -0.57
CALD1-201ENST00000361675 MCCP23508 829 aa11.5□□□□□ -0.57
CALD1-201ENST00000361675 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
CALD1-201ENST00000361675 SAMD9LQ8IVG5 1584 aa11.5□□□□□ -0.57
CALD1-201ENST00000361675 TTC37Q6PGP7 1564 aa11.49□□□□□ -0.57
CALD1-201ENST00000361675 EIF4G2P78344 907 aaKnown RBP eCLIP11.49□□□□□ -0.57
CALD1-201ENST00000361675 PHF23Q9BUL5 403 aaPredicted RBP11.49□□□□□ -0.57
CALD1-201ENST00000361675 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
CALD1-201ENST00000361675 NUP155O75694 1391 aa11.49□□□□□ -0.57
CALD1-201ENST00000361675 NUDCQ9Y266 331 aa11.49□□□□□ -0.57
CALD1-201ENST00000361675 ZBTB22O15209 634 aa11.48□□□□□ -0.57
CALD1-201ENST00000361675 BECN1Q14457 450 aa11.48□□□□□ -0.57
CALD1-201ENST00000361675 CBX1P83916 185 aa11.48□□□□□ -0.57
CALD1-201ENST00000361675 ZNF622Q969S3 477 aaKnown RBP eCLIP11.48□□□□□ -0.57
CALD1-201ENST00000361675 KIAA1107Q9UPP5 1409 aa11.48□□□□□ -0.57
CALD1-201ENST00000361675 ZBED9Q6R2W3 1325 aa11.48□□□□□ -0.57
CALD1-201ENST00000361675 KIF15Q9NS87 1388 aa11.47□□□□□ -0.57
CALD1-201ENST00000361675 TSPY4P0CV99 314 aa11.47□□□□□ -0.57
CALD1-201ENST00000361675 TSPY10P0CW01 314 aa11.47□□□□□ -0.57
CALD1-201ENST00000361675 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.47□□□□□ -0.57
CALD1-201ENST00000361675 SPATA31E1Q6ZUB1 1445 aa11.47□□□□□ -0.57
CALD1-201ENST00000361675 DNAJC2Q99543 621 aaKnown RBP11.47□□□□□ -0.57
CALD1-201ENST00000361675 PLIN1O60240 522 aa11.46□□□□□ -0.57
CALD1-201ENST00000361675 MAP7D2Q96T17 732 aa11.46□□□□□ -0.57
CALD1-201ENST00000361675 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.58
CALD1-201ENST00000361675 RGS22Q8NE09 1264 aa11.46□□□□□ -0.58
CALD1-201ENST00000361675 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
CALD1-201ENST00000361675 UQCRHLA0A096LP55 91 aa11.45□□□□□ -0.58
CALD1-201ENST00000361675 UQCRHP07919 91 aa11.45□□□□□ -0.58
CALD1-201ENST00000361675 ZBTB12Q9Y330 459 aaPredicted RBP11.45□□□□□ -0.58
CALD1-201ENST00000361675 SYCP2Q9BX26 1530 aa11.45□□□□□ -0.58
CALD1-201ENST00000361675 MS4A1P11836 297 aa11.45□□□□□ -0.58
CALD1-201ENST00000361675 ZNF771Q7L3S4 317 aaPredicted RBP11.45□□□□□ -0.58
CALD1-201ENST00000361675 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
CALD1-201ENST00000361675 KIF7Q2M1P5 1343 aa11.44□□□□□ -0.58
CALD1-201ENST00000361675 CCDC7Q96M83 1385 aa11.44□□□□□ -0.58
CALD1-201ENST00000361675 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
CALD1-201ENST00000361675 PREX2Q70Z35 1606 aa11.44□□□□□ -0.58
CALD1-201ENST00000361675 GRIPAP1Q4V328 841 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms