RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 ZNF771Q7L3S4 317 aaPredicted RBP12.94□□□□□ -0.34
HIPK1-202ENST00000361587 ACBD3Q9H3P7 528 aa12.94□□□□□ -0.34
HIPK1-202ENST00000361587 NUCB2P80303 420 aa12.94□□□□□ -0.34
HIPK1-202ENST00000361587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
HIPK1-202ENST00000361587 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
HIPK1-202ENST00000361587 WIZO95785 1651 aa12.93□□□□□ -0.34
HIPK1-202ENST00000361587 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
HIPK1-202ENST00000361587 ABCC8Q09428 1581 aa12.92□□□□□ -0.34
HIPK1-202ENST00000361587 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■■□□□ 12.5
HIPK1-202ENST00000361587 PRKRIP1Q9H875 184 aaPredicted RBP12.92□□□□□ -0.34
HIPK1-202ENST00000361587 ARGLU1Q9NWB6 273 aaPredicted RBP12.92□□□□□ -0.34
HIPK1-202ENST00000361587 ANO2Q9NQ90 1003 aa12.92□□□□□ -0.34
HIPK1-202ENST00000361587 CPLX1O14810 134 aa12.91□□□□□ -0.34
HIPK1-202ENST00000361587 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
HIPK1-202ENST00000361587 HSP90AB4PQ58FF6 505 aa12.91□□□□□ -0.34
HIPK1-202ENST00000361587 PCMTD1Q96MG8 357 aaPredicted RBP12.91□□□□□ -0.34
HIPK1-202ENST00000361587 TEFQ10587 303 aa12.91□□□□□ -0.34
HIPK1-202ENST00000361587 EXOC6Q8TAG9 804 aa12.91□□□□□ -0.34
HIPK1-202ENST00000361587 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
HIPK1-202ENST00000361587 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
HIPK1-202ENST00000361587 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
HIPK1-202ENST00000361587 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
HIPK1-202ENST00000361587 ST20-MTHFSA0A0A6YYL1 179 aa12.9□□□□□ -0.34
HIPK1-202ENST00000361587 DDX58O95786 925 aaKnown RBP12.9□□□□□ -0.34
HIPK1-202ENST00000361587 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
HIPK1-202ENST00000361587 TRAK1Q9UPV9 953 aa12.9□□□□□ -0.34
HIPK1-202ENST00000361587 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
HIPK1-202ENST00000361587 TRDNQ13061 729 aa12.9□□□□□ -0.34
HIPK1-202ENST00000361587 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
HIPK1-202ENST00000361587 ZNF592Q92610 1267 aa12.9□□□□□ -0.34
HIPK1-202ENST00000361587 AK7Q96M32 723 aa12.9□□□□□ -0.34
HIPK1-202ENST00000361587 HOMER1Q86YM7 354 aa12.9□□□□□ -0.35
HIPK1-202ENST00000361587 DZIP1LQ8IYY4 767 aaKnown RBP12.89□□□□□ -0.35
HIPK1-202ENST00000361587 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
HIPK1-202ENST00000361587 USP47Q96K76 1375 aa12.89□□□□□ -0.35
HIPK1-202ENST00000361587 SASS6Q6UVJ0 657 aa12.89□□□□□ -0.35
HIPK1-202ENST00000361587 C9orf78Q9NZ63 289 aaPredicted RBP12.89□□□□□ -0.35
HIPK1-202ENST00000361587 NOM1Q5C9Z4 860 aaKnown RBP12.88□□□□□ -0.35
HIPK1-202ENST00000361587 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
HIPK1-202ENST00000361587 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
HIPK1-202ENST00000361587 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
HIPK1-202ENST00000361587 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
HIPK1-202ENST00000361587 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
HIPK1-202ENST00000361587 RUFY1Q96T51 708 aa12.88□□□□□ -0.35
HIPK1-202ENST00000361587 ERC2O15083 957 aa12.87□□□□□ -0.35
HIPK1-202ENST00000361587 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
HIPK1-202ENST00000361587 ERICH2A1L162 156 aa12.87□□□□□ -0.35
HIPK1-202ENST00000361587 CCDC73Q6ZRK6 1079 aa12.87□□□□□ -0.35
HIPK1-202ENST00000361587 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
HIPK1-202ENST00000361587 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
HIPK1-202ENST00000361587 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
HIPK1-202ENST00000361587 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
HIPK1-202ENST00000361587 CTDP1Q9Y5B0 961 aaPredicted RBP12.86□□□□□ -0.35
HIPK1-202ENST00000361587 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
HIPK1-202ENST00000361587 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
HIPK1-202ENST00000361587 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
HIPK1-202ENST00000361587 NAT10Q9H0A0 1025 aaKnown RBP12.86□□□□□ -0.35
HIPK1-202ENST00000361587 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
HIPK1-202ENST00000361587 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
HIPK1-202ENST00000361587 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
HIPK1-202ENST00000361587 PLIN1O60240 522 aa12.85□□□□□ -0.35
HIPK1-202ENST00000361587 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
HIPK1-202ENST00000361587 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
HIPK1-202ENST00000361587 LETM1O95202 739 aaPredicted RBP12.85□□□□□ -0.35
HIPK1-202ENST00000361587 RRP12Q5JTH9 1297 aaKnown RBP12.85□□□□□ -0.35
HIPK1-202ENST00000361587 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
HIPK1-202ENST00000361587 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
HIPK1-202ENST00000361587 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
HIPK1-202ENST00000361587 FOXD4L6Q3SYB3 417 aaPredicted RBP12.84□□□□□ -0.35
HIPK1-202ENST00000361587 FOXD4L3Q6VB84 417 aaPredicted RBP12.84□□□□□ -0.35
HIPK1-202ENST00000361587 GNAI1P63096 354 aa12.84□□□□□ -0.35
HIPK1-202ENST00000361587 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
HIPK1-202ENST00000361587 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.36
HIPK1-202ENST00000361587 APAF1O14727 1248 aa12.83□□□□□ -0.36
HIPK1-202ENST00000361587 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
HIPK1-202ENST00000361587 CALRP27797 417 aaKnown RBP12.83□□□□□ -0.36
HIPK1-202ENST00000361587 NFXL1Q6ZNB6 911 aa12.83□□□□□ -0.36
HIPK1-202ENST00000361587 APPP05067 770 aa12.83□□□□□ -0.36
HIPK1-202ENST00000361587 MRE11P49959 708 aa12.83□□□□□ -0.36
HIPK1-202ENST00000361587 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
HIPK1-202ENST00000361587 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
HIPK1-202ENST00000361587 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
HIPK1-202ENST00000361587 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
HIPK1-202ENST00000361587 CDC45O75419 566 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 RIPK4P57078 832 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 FAM13BQ9NYF5 915 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.81□□□□□ -0.36
HIPK1-202ENST00000361587 CCP110O43303 1012 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 PSMA5P28066 241 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 CCDC173Q0VFZ6 552 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 MYO6Q9UM54 1294 aa12.81□□□□□ -0.36
HIPK1-202ENST00000361587 EVA1CP58658 441 aa12.8□□□□□ -0.36
HIPK1-202ENST00000361587 DHX8Q14562 1220 aaKnown RBP12.8□□□□□ -0.36
HIPK1-202ENST00000361587 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
HIPK1-202ENST00000361587 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
HIPK1-202ENST00000361587 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
HIPK1-202ENST00000361587 PATL2C9JE40 543 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms