RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ESCO1Q5FWF5 840 aa23.05■■□□□ 1.28
CLIP2-202ENST00000361545 SCAPERQ9BY12 1400 aa23.05■■□□□ 1.28
CLIP2-202ENST00000361545 KIF7Q2M1P5 1343 aa23.05■■□□□ 1.28
CLIP2-202ENST00000361545 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
CLIP2-202ENST00000361545 HTATSF1O43719 755 aaKnown RBP23.05■■□□□ 1.28
CLIP2-202ENST00000361545 NAP1L5Q96NT1 182 aaPredicted RBP23.05■■□□□ 1.28
CLIP2-202ENST00000361545 FKBP5Q13451 457 aaPredicted RBP23.04■■□□□ 1.28
CLIP2-202ENST00000361545 ARAP1Q96P48 1450 aa23.04■■□□□ 1.28
CLIP2-202ENST00000361545 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.04■■□□□ 1.28
CLIP2-202ENST00000361545 USP35Q9P2H5 1018 aa23.04■■□□□ 1.28
CLIP2-202ENST00000361545 TSPYL4Q9UJ04 414 aa23.03■■□□□ 1.28
CLIP2-202ENST00000361545 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
CLIP2-202ENST00000361545 EXOC6Q8TAG9 804 aa23.02■■□□□ 1.28
CLIP2-202ENST00000361545 CRBNQ96SW2 442 aa23.02■■□□□ 1.28
CLIP2-202ENST00000361545 MIA2Q96PC5 1412 aa23.02■■□□□ 1.28
CLIP2-202ENST00000361545 RUNDC1Q96C34 613 aa23.02■■□□□ 1.28
CLIP2-202ENST00000361545 ABTB2Q8N961 1025 aa23.01■■□□□ 1.27
CLIP2-202ENST00000361545 RASSF8Q8NHQ8 419 aa23.01■■□□□ 1.27
CLIP2-202ENST00000361545 DDX58O95786 925 aaKnown RBP23■■□□□ 1.27
CLIP2-202ENST00000361545 RRP1P56182 461 aaKnown RBP23■■□□□ 1.27
CLIP2-202ENST00000361545 PRAM1Q96QH2 718 aa23■■□□□ 1.27
CLIP2-202ENST00000361545 CCDC7Q96M83 1385 aa22.99■■□□□ 1.27
CLIP2-202ENST00000361545 ZBED9Q6R2W3 1325 aa22.98■■□□□ 1.27
CLIP2-202ENST00000361545 FOXD4L5Q5VV16 416 aaPredicted RBP22.98■■□□□ 1.27
CLIP2-202ENST00000361545 FOXD4L4Q8WXT5 416 aaPredicted RBP22.98■■□□□ 1.27
CLIP2-202ENST00000361545 GPRASP1Q5JY77 1395 aa22.97■■□□□ 1.27
CLIP2-202ENST00000361545 KIF16BQ96L93 1317 aa22.97■■□□□ 1.27
CLIP2-202ENST00000361545 ST18O60284 1047 aa22.96■■□□□ 1.27
CLIP2-202ENST00000361545 THEMISQ8N1K5 641 aaPredicted RBP22.96■■□□□ 1.27
CLIP2-202ENST00000361545 AIMP1Q12904 312 aaKnown RBP22.96■■□□□ 1.27
CLIP2-202ENST00000361545 L1TD1Q5T7N2 865 aaKnown RBP22.96■■□□□ 1.27
CLIP2-202ENST00000361545 API5Q9BZZ5 524 aaKnown RBP22.96■■□□□ 1.27
CLIP2-202ENST00000361545 VPS53Q5VIR6 699 aa22.96■■□□□ 1.27
CLIP2-202ENST00000361545 CENPQQ7L2Z9 268 aaPredicted RBP22.96■■□□□ 1.27
CLIP2-202ENST00000361545 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
CLIP2-202ENST00000361545 MTHFSP49914 203 aa22.95■■□□□ 1.26
CLIP2-202ENST00000361545 NBPF1Q3BBV0 1214 aa22.95■■□□□ 1.26
CLIP2-202ENST00000361545 MSNP26038 577 aaKnown RBP22.95■■□□□ 1.26
CLIP2-202ENST00000361545 GNAI1P63096 354 aa22.95■■□□□ 1.26
CLIP2-202ENST00000361545 C9orf84Q5VXU9 1444 aa22.95■■□□□ 1.26
CLIP2-202ENST00000361545 DZIP1LQ8IYY4 767 aaKnown RBP22.95■■□□□ 1.26
CLIP2-202ENST00000361545 KLHL34Q8N239 644 aa22.95■■□□□ 1.26
CLIP2-202ENST00000361545 ERICH3Q5RHP9 1530 aa22.94■■□□□ 1.26
CLIP2-202ENST00000361545 DDX19BQ9UMR2 479 aa22.94■■□□□ 1.26
CLIP2-202ENST00000361545 DIAPH3Q9NSV4 1193 aa22.94■■□□□ 1.26
CLIP2-202ENST00000361545 DEKP35659 375 aaKnown RBP22.94■■□□□ 1.26
CLIP2-202ENST00000361545 CHAF1AQ13111 956 aaPredicted RBP22.93■■□□□ 1.26
CLIP2-202ENST00000361545 VPS37DQ86XT2 251 aa22.93■■□□□ 1.26
CLIP2-202ENST00000361545 MARCH6O60337 910 aa22.92■■□□□ 1.26
CLIP2-202ENST00000361545 IFIT2P09913 472 aaKnown RBP22.92■■□□□ 1.26
CLIP2-202ENST00000361545 FBXW7Q969H0 707 aa22.92■■□□□ 1.26
CLIP2-202ENST00000361545 SLC26A8Q96RN1 970 aa22.92■■□□□ 1.26
CLIP2-202ENST00000361545 PHF23Q9BUL5 403 aaPredicted RBP22.92■■□□□ 1.26
CLIP2-202ENST00000361545 DNAJC5BQ9UF47 199 aa22.91■■□□□ 1.26
CLIP2-202ENST00000361545 RAD21O60216 631 aa22.91■■□□□ 1.26
CLIP2-202ENST00000361545 SYAP1Q96A49 352 aaPredicted RBP22.91■■□□□ 1.26
CLIP2-202ENST00000361545 STRN4Q9NRL3 753 aa22.91■■□□□ 1.26
CLIP2-202ENST00000361545 CCDC34Q96HJ3 373 aa22.9■■□□□ 1.26
CLIP2-202ENST00000361545 RIC3Q7Z5B4 369 aa22.9■■□□□ 1.26
CLIP2-202ENST00000361545 TROQ12816 1431 aaPredicted RBP22.9■■□□□ 1.26
CLIP2-202ENST00000361545 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
CLIP2-202ENST00000361545 PTMSP20962 102 aa22.9■■□□□ 1.26
CLIP2-202ENST00000361545 G3BP1Q13283 466 aaKnown RBP eCLIP22.89■■□□□ 1.265e-6■■■■□ 22.5
CLIP2-202ENST00000361545 NOL10Q9BSC4 688 aaKnown RBP22.89■■□□□ 1.25
CLIP2-202ENST00000361545 CREBRFQ8IUR6 639 aa22.89■■□□□ 1.25
CLIP2-202ENST00000361545 APPP05067 770 aa22.88■■□□□ 1.25
CLIP2-202ENST00000361545 KIF3AQ9Y496 699 aa22.88■■□□□ 1.25
CLIP2-202ENST00000361545 SF3A1Q15459 793 aaKnown RBP22.87■■□□□ 1.25
CLIP2-202ENST00000361545 SLC12A5Q9H2X9 1139 aa22.86■■□□□ 1.25
CLIP2-202ENST00000361545 ADAMTS8Q9UP79 889 aa22.86■■□□□ 1.25
CLIP2-202ENST00000361545 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
CLIP2-202ENST00000361545 LRRFIP1Q32MZ4 808 aaKnown RBP22.85■■□□□ 1.25
CLIP2-202ENST00000361545 CDK19Q9BWU1 502 aa22.85■■□□□ 1.25
CLIP2-202ENST00000361545 SLC52A1Q9NWF4 448 aa22.85■■□□□ 1.25
CLIP2-202ENST00000361545 EFCAB5A4FU69 1503 aa22.85■■□□□ 1.25
CLIP2-202ENST00000361545 H3BQV1 296 aa22.85■■□□□ 1.25
CLIP2-202ENST00000361545 IFFO2Q5TF58 517 aa22.85■■□□□ 1.25
CLIP2-202ENST00000361545 IPO9Q96P70 1041 aaKnown RBP22.85■■□□□ 1.25
CLIP2-202ENST00000361545 CABP1Q9NZU7 370 aa22.85■■□□□ 1.25
CLIP2-202ENST00000361545 FAM184AQ8NB25 1140 aa22.84■■□□□ 1.25
CLIP2-202ENST00000361545 TRIM34Q9BYJ4 488 aa22.84■■□□□ 1.25
CLIP2-202ENST00000361545 FOXD4L6Q3SYB3 417 aaPredicted RBP22.84■■□□□ 1.25
CLIP2-202ENST00000361545 FOXD4L3Q6VB84 417 aaPredicted RBP22.84■■□□□ 1.25
CLIP2-202ENST00000361545 AKAP17AQ02040 695 aaKnown RBP22.84■■□□□ 1.25
CLIP2-202ENST00000361545 WASHC2AQ641Q2 1341 aa22.84■■□□□ 1.25
CLIP2-202ENST00000361545 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
CLIP2-202ENST00000361545 PRXQ9BXM0 1461 aa22.83■■□□□ 1.25
CLIP2-202ENST00000361545 CSPP1Q1MSJ5 1256 aa22.83■■□□□ 1.25
CLIP2-202ENST00000361545 NUTM2BA6NNL0 878 aaPredicted RBP22.83■■□□□ 1.25
CLIP2-202ENST00000361545 NUTM2EB1AL46 878 aaPredicted RBP22.83■■□□□ 1.25
CLIP2-202ENST00000361545 KIAA2012Q0VF49 1180 aa22.83■■□□□ 1.25
CLIP2-202ENST00000361545 FAM161AQ3B820 660 aa22.83■■□□□ 1.25
CLIP2-202ENST00000361545 ANKLE2Q86XL3 938 aa22.83■■□□□ 1.25
CLIP2-202ENST00000361545 NUTM2AQ8IVF1 878 aaPredicted RBP22.83■■□□□ 1.25
CLIP2-202ENST00000361545 AMOTL1Q8IY63 956 aa22.83■■□□□ 1.24
CLIP2-202ENST00000361545 TPM4P67936 248 aa22.83■■□□□ 1.24
CLIP2-202ENST00000361545 EHBP1L1Q8N3D4 1523 aa22.82■■□□□ 1.24
CLIP2-202ENST00000361545 PRKAR2BP31323 418 aa22.82■■□□□ 1.24
CLIP2-202ENST00000361545 RUFY2Q8WXA3 655 aa22.82■■□□□ 1.24
CLIP2-202ENST00000361545 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms