RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 SIGLEC1Q9BZZ2 1709 aa3.96□□□□□ -1.77
LTN1-201ENST00000361371 LMTK2Q8IWU2 1503 aa3.96□□□□□ -1.77
LTN1-201ENST00000361371 HECW2Q9P2P5 1572 aa3.96□□□□□ -1.77
LTN1-201ENST00000361371 SCAF1Q9H7N4 1312 aaKnown RBP3.96□□□□□ -1.78
LTN1-201ENST00000361371 EFCAB6Q5THR3 1501 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 MRS2Q9HD23 443 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 PPRC1Q5VV67 1664 aaKnown RBP3.96□□□□□ -1.78
LTN1-201ENST00000361371 CENPJQ9HC77 1338 aaPredicted RBP3.96□□□□□ -1.78
LTN1-201ENST00000361371 TMC1Q8TDI8 760 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 TRPM2O94759 1503 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 CLTCL1P53675 1640 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 TNNT2P45379 298 aaPredicted RBP3.96□□□□□ -1.78
LTN1-201ENST00000361371 ERVK-7P63135 1459 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 TNRQ92752 1358 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 TMF1P82094 1093 aa3.96□□□□□ -1.78
LTN1-201ENST00000361371 SALL2Q9Y467 1007 aaPredicted RBP3.96□□□□□ -1.78
LTN1-201ENST00000361371 IQGAP3Q86VI3 1631 aa3.95□□□□□ -1.78
LTN1-201ENST00000361371 A2ML1A8K2U0 1454 aa3.95□□□□□ -1.78
LTN1-201ENST00000361371 ZRANB1Q9UGI0 708 aa3.95□□□□□ -1.78
LTN1-201ENST00000361371 SYNMO15061 1565 aa3.95□□□□□ -1.78
LTN1-201ENST00000361371 RPGRIP1LQ68CZ1 1315 aa3.95□□□□□ -1.78
LTN1-201ENST00000361371 ZMYM4Q5VZL5 1548 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 PPP6R1Q9UPN7 881 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 E9PCH4 1651 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 AMER1Q5JTC6 1135 aaPredicted RBP3.94□□□□□ -1.78
LTN1-201ENST00000361371 AGLP35573 1532 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 TMEM2Q9UHN6 1383 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 PIK3C2GO75747 1445 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 RIMS2Q9UQ26 1411 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 KCNA6P17658 529 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 POGKQ9P215 609 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 ADGBQ8N7X0 1667 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 RNF17Q9BXT8 1623 aaKnown RBP3.94□□□□□ -1.78
LTN1-201ENST00000361371 KDM4FA0A1W2PPD8 638 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 HNRNPUQ00839 825 aaKnown RBP eCLIP3.94□□□□□ -1.78
LTN1-201ENST00000361371 GGNBP2Q9H3C7 697 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 GTF3C3Q9Y5Q9 886 aa3.94□□□□□ -1.78
LTN1-201ENST00000361371 PRR36Q9H6K5 1346 aa3.93□□□□□ -1.78
LTN1-201ENST00000361371 CABP1Q9NZU7 370 aa3.93□□□□□ -1.78
LTN1-201ENST00000361371 SCAF11Q99590 1463 aaKnown RBP3.93□□□□□ -1.78
LTN1-201ENST00000361371 SRPK2P78362 688 aaKnown RBP3.93□□□□□ -1.78
LTN1-201ENST00000361371 PTPRMP28827 1452 aa3.93□□□□□ -1.78
LTN1-201ENST00000361371 ROBO2Q9HCK4 1378 aa3.93□□□□□ -1.78
LTN1-201ENST00000361371 CCER2I3L3R5 266 aa3.93□□□□□ -1.78
LTN1-201ENST00000361371 AMOTL2Q9Y2J4 779 aa3.93□□□□□ -1.78
LTN1-201ENST00000361371 MADDQ8WXG6 1647 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 TSPOAP1O95153 1857 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 PLEKHG5O94827 1062 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 PNISRQ8TF01 805 aaKnown RBP3.92□□□□□ -1.78
LTN1-201ENST00000361371 STAC3Q96MF2 364 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 RICTORQ6R327 1708 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 ADAMTS13Q76LX8 1427 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 ADGRB3O60242 1522 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 CDK19Q9BWU1 502 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 ADGRB1O14514 1584 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 PTPRUQ92729 1446 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 DEPDC5O75140 1603 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 BCORL1Q5H9F3 1711 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 NRXN1Q9ULB1 1477 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 ZFYVE9O95405 1425 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 LAMC1P11047 1609 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 ARHGEF40Q8TER5 1519 aa3.92□□□□□ -1.78
LTN1-201ENST00000361371 YTHDC2Q9H6S0 1430 aaKnown RBP3.92□□□□□ -1.78
LTN1-201ENST00000361371 ASXL1Q8IXJ9 1541 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 PPP2R1AP30153 589 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 IRX6P78412 446 aaPredicted RBP3.91□□□□□ -1.78
LTN1-201ENST00000361371 MYOM2P54296 1465 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.91□□□□□ -1.782e-6■■■□□ 17.9
LTN1-201ENST00000361371 PMFBP1Q8TBY8 1022 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 ADAMTS8Q9UP79 889 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 TET3O43151 1660 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 THEMISQ8N1K5 641 aaPredicted RBP3.91□□□□□ -1.78
LTN1-201ENST00000361371 DMRT2Q9Y5R5 561 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 SOX12O15370 315 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 NME9Q86XW9 330 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 KNSTRNQ9Y448 316 aa3.91□□□□□ -1.78
LTN1-201ENST00000361371 CDCA7LQ96GN5 454 aa3.9□□□□□ -1.78
LTN1-201ENST00000361371 NEXMIFQ5QGS0 1516 aa3.9□□□□□ -1.78
LTN1-201ENST00000361371 FYB1O15117 783 aa3.9□□□□□ -1.78
LTN1-201ENST00000361371 PIK3C2BO00750 1634 aa3.9□□□□□ -1.78
LTN1-201ENST00000361371 CCDC146Q8IYE0 955 aa3.9□□□□□ -1.79
LTN1-201ENST00000361371 TBX22Q9Y458 520 aa3.9□□□□□ -1.79
LTN1-201ENST00000361371 LRPPRCP42704 1394 aaKnown RBP3.9□□□□□ -1.79
LTN1-201ENST00000361371 EIF2AK4Q9P2K8 1649 aaKnown RBP3.9□□□□□ -1.79
LTN1-201ENST00000361371 ABCC11Q96J66 1382 aa3.9□□□□□ -1.79
LTN1-201ENST00000361371 WASLO00401 505 aaPredicted RBP3.9□□□□□ -1.79
LTN1-201ENST00000361371 XPCQ01831 940 aaPredicted RBP3.9□□□□□ -1.79
LTN1-201ENST00000361371 NUTM2GQ5VZR2 741 aa3.9□□□□□ -1.79
LTN1-201ENST00000361371 NUDT16Q96DE0 195 aaKnown RBP3.9□□□□□ -1.79
LTN1-201ENST00000361371 EID1Q9Y6B2 187 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 KIF13AQ9H1H9 1805 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 SPATA31D1Q6ZQQ2 1576 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 PARD3Q8TEW0 1356 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 CENPBP07199 599 aaPredicted RBP3.89□□□□□ -1.79
LTN1-201ENST00000361371 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.89□□□□□ -1.79
LTN1-201ENST00000361371 DDX17Q92841 729 aaKnown RBP3.89□□□□□ -1.79
LTN1-201ENST00000361371 A0A1W2PP64 1363 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 EVC2Q86UK5 1308 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 MYBBP1AQ9BQG0 1328 aaKnown RBP3.89□□□□□ -1.79
LTN1-201ENST00000361371 CEP152O94986 1710 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms