RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 TRDNQ13061 729 aa24.87■■□□□ 1.57
SMURF1-202ENST00000361368 MINK1Q8N4C8 1332 aaPredicted RBP24.87■■□□□ 1.57
SMURF1-202ENST00000361368 REC8O95072 547 aa24.87■■□□□ 1.57
SMURF1-202ENST00000361368 ANKRD20A12PQ8NF67 263 aa24.87■■□□□ 1.57
SMURF1-202ENST00000361368 DIAPH1O60610 1272 aaKnown RBP24.87■■□□□ 1.57
SMURF1-202ENST00000361368 SKOR2Q2VWA4 1001 aaPredicted RBP24.87■■□□□ 1.57
SMURF1-202ENST00000361368 AMER1Q5JTC6 1135 aaPredicted RBP24.86■■□□□ 1.57
SMURF1-202ENST00000361368 CPLX1O14810 134 aa24.85■■□□□ 1.57
SMURF1-202ENST00000361368 MCTP1Q6DN14 999 aa24.85■■□□□ 1.57
SMURF1-202ENST00000361368 DHX16O60231 1041 aaKnown RBP24.85■■□□□ 1.57
SMURF1-202ENST00000361368 APPP05067 770 aa24.85■■□□□ 1.57
SMURF1-202ENST00000361368 RNF20Q5VTR2 975 aa24.85■■□□□ 1.57
SMURF1-202ENST00000361368 FOXD4L5Q5VV16 416 aaPredicted RBP24.85■■□□□ 1.57
SMURF1-202ENST00000361368 FOXD4L4Q8WXT5 416 aaPredicted RBP24.85■■□□□ 1.57
SMURF1-202ENST00000361368 SYTL4Q96C24 671 aaPredicted RBP24.85■■□□□ 1.57
SMURF1-202ENST00000361368 HOOK1Q9UJC3 728 aaKnown RBP24.84■■□□□ 1.57
SMURF1-202ENST00000361368 CWC22Q9HCG8 908 aaKnown RBP24.84■■□□□ 1.57
SMURF1-202ENST00000361368 IPO7O95373 1038 aaKnown RBP24.84■■□□□ 1.57
SMURF1-202ENST00000361368 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
SMURF1-202ENST00000361368 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.84■■□□□ 1.57
SMURF1-202ENST00000361368 G3BP1Q13283 466 aaKnown RBP eCLIP24.83■■□□□ 1.57
SMURF1-202ENST00000361368 DDX19BQ9UMR2 479 aa24.83■■□□□ 1.57
SMURF1-202ENST00000361368 KRI1Q8N9T8 703 aaKnown RBP24.83■■□□□ 1.57
SMURF1-202ENST00000361368 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.56
SMURF1-202ENST00000361368 ERICH2A1L162 156 aa24.82■■□□□ 1.56
SMURF1-202ENST00000361368 HSP90AB4PQ58FF6 505 aa24.82■■□□□ 1.56
SMURF1-202ENST00000361368 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
SMURF1-202ENST00000361368 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
SMURF1-202ENST00000361368 FAM161AQ3B820 660 aa24.81■■□□□ 1.56
SMURF1-202ENST00000361368 FBXW7Q969H0 707 aa24.8■■□□□ 1.56
SMURF1-202ENST00000361368 CCDC43Q96MW1 224 aaKnown RBP24.8■■□□□ 1.56
SMURF1-202ENST00000361368 RBM33Q96EV2 1170 aaKnown RBP24.8■■□□□ 1.56
SMURF1-202ENST00000361368 WASHC2AQ641Q2 1341 aa24.8■■□□□ 1.56
SMURF1-202ENST00000361368 RAPGEF4Q8WZA2 1011 aa24.79■■□□□ 1.56
SMURF1-202ENST00000361368 ATF3P18847 181 aa24.79■■□□□ 1.56
SMURF1-202ENST00000361368 DDX49Q9Y6V7 483 aaKnown RBP24.79■■□□□ 1.56
SMURF1-202ENST00000361368 PCMTD1Q96MG8 357 aaPredicted RBP24.78■■□□□ 1.56
SMURF1-202ENST00000361368 ANO2Q9NQ90 1003 aa24.78■■□□□ 1.56
SMURF1-202ENST00000361368 BCL2L13Q9BXK5 485 aa24.78■■□□□ 1.56
SMURF1-202ENST00000361368 GPS2Q13227 327 aa24.77■■□□□ 1.56
SMURF1-202ENST00000361368 STAC3Q96MF2 364 aa24.77■■□□□ 1.56
SMURF1-202ENST00000361368 WWC1Q8IX03 1113 aa24.77■■□□□ 1.56
SMURF1-202ENST00000361368 CNKSR2Q8WXI2 1034 aa24.76■■□□□ 1.55
SMURF1-202ENST00000361368 ARID3AQ99856 593 aa24.76■■□□□ 1.55
SMURF1-202ENST00000361368 NFXL1Q6ZNB6 911 aa24.75■■□□□ 1.55
SMURF1-202ENST00000361368 FKBP5Q13451 457 aaPredicted RBP24.75■■□□□ 1.55
SMURF1-202ENST00000361368 RIPK4P57078 832 aa24.74■■□□□ 1.55
SMURF1-202ENST00000361368 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
SMURF1-202ENST00000361368 ERC2O15083 957 aa24.73■■□□□ 1.55
SMURF1-202ENST00000361368 CCAR2Q8N163 923 aaKnown RBP24.72■■□□□ 1.55
SMURF1-202ENST00000361368 GNAI1P63096 354 aa24.72■■□□□ 1.55
SMURF1-202ENST00000361368 USP47Q96K76 1375 aa24.72■■□□□ 1.55
SMURF1-202ENST00000361368 DCAF8L1A6NGE4 600 aa24.72■■□□□ 1.55
SMURF1-202ENST00000361368 SAFBQ15424 915 aaKnown RBP eCLIP24.72■■□□□ 1.55
SMURF1-202ENST00000361368 SETQ01105 290 aaPredicted RBP24.71■■□□□ 1.55
SMURF1-202ENST00000361368 DZIP1LQ8IYY4 767 aaKnown RBP24.7■■□□□ 1.54
SMURF1-202ENST00000361368 DHX57Q6P158 1386 aaKnown RBP24.7■■□□□ 1.54
SMURF1-202ENST00000361368 ANO8Q9HCE9 1232 aaPredicted RBP24.7■■□□□ 1.54
SMURF1-202ENST00000361368 COG6Q9Y2V7 657 aa24.7■■□□□ 1.54
SMURF1-202ENST00000361368 RRP1P56182 461 aaKnown RBP24.69■■□□□ 1.54
SMURF1-202ENST00000361368 MIA2Q96PC5 1412 aa24.69■■□□□ 1.54
SMURF1-202ENST00000361368 TSPYL4Q9UJ04 414 aa24.69■■□□□ 1.54
SMURF1-202ENST00000361368 APAF1O14727 1248 aa24.68■■□□□ 1.54
SMURF1-202ENST00000361368 NECTIN2Q92692 538 aa24.67■■□□□ 1.54
SMURF1-202ENST00000361368 RUNDC1Q96C34 613 aa24.67■■□□□ 1.54
SMURF1-202ENST00000361368 RIC3Q7Z5B4 369 aa24.66■■□□□ 1.54
SMURF1-202ENST00000361368 BICD2Q8TD16 824 aa24.65■■□□□ 1.54
SMURF1-202ENST00000361368 RALYLQ86SE5 291 aaKnown RBP24.65■■□□□ 1.54
SMURF1-202ENST00000361368 KLHL34Q8N239 644 aa24.65■■□□□ 1.54
SMURF1-202ENST00000361368 INTS3Q68E01 1043 aaKnown RBP24.64■■□□□ 1.54
SMURF1-202ENST00000361368 R3HCC1Q9Y3T6 440 aaKnown RBP24.64■■□□□ 1.54
SMURF1-202ENST00000361368 PRKRIP1Q9H875 184 aaPredicted RBP24.64■■□□□ 1.54
SMURF1-202ENST00000361368 BRMS1Q9HCU9 246 aa24.64■■□□□ 1.53
SMURF1-202ENST00000361368 FAM69CQ0P6D2 419 aa24.64■■□□□ 1.53
SMURF1-202ENST00000361368 PDE4AP27815 886 aa24.63■■□□□ 1.53
SMURF1-202ENST00000361368 FOXD4L6Q3SYB3 417 aaPredicted RBP24.63■■□□□ 1.53
SMURF1-202ENST00000361368 FOXD4L3Q6VB84 417 aaPredicted RBP24.63■■□□□ 1.53
SMURF1-202ENST00000361368 NLRP2Q9NX02 1062 aa24.63■■□□□ 1.53
SMURF1-202ENST00000361368 CRBNQ96SW2 442 aa24.63■■□□□ 1.53
SMURF1-202ENST00000361368 ZBED9Q6R2W3 1325 aa24.62■■□□□ 1.53
SMURF1-202ENST00000361368 AAMPQ13685 434 aa24.61■■□□□ 1.53
SMURF1-202ENST00000361368 SMC3Q9UQE7 1217 aa24.61■■□□□ 1.53
SMURF1-202ENST00000361368 XBP1P17861 261 aa24.61■■□□□ 1.53
SMURF1-202ENST00000361368 PLIN1O60240 522 aa24.59■■□□□ 1.53
SMURF1-202ENST00000361368 NEUROD6Q96NK8 337 aa24.59■■□□□ 1.53
SMURF1-202ENST00000361368 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
SMURF1-202ENST00000361368 CCDC73Q6ZRK6 1079 aa24.58■■□□□ 1.53
SMURF1-202ENST00000361368 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
SMURF1-202ENST00000361368 WASHC4Q2M389 1173 aa24.58■■□□□ 1.53
SMURF1-202ENST00000361368 CT47A1Q5JQC4 288 aaPredicted RBP24.58■■□□□ 1.53
SMURF1-202ENST00000361368 EXOC6Q8TAG9 804 aa24.58■■□□□ 1.52
SMURF1-202ENST00000361368 GPRASP1Q5JY77 1395 aa24.57■■□□□ 1.52
SMURF1-202ENST00000361368 CCDC27Q2M243 656 aa24.57■■□□□ 1.52
SMURF1-202ENST00000361368 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
SMURF1-202ENST00000361368 SASS6Q6UVJ0 657 aa24.56■■□□□ 1.52
SMURF1-202ENST00000361368 ODF2Q5BJF6 829 aa24.56■■□□□ 1.52
SMURF1-202ENST00000361368 CDR1P51861 262 aa24.56■■□□□ 1.52
SMURF1-202ENST00000361368 VPS37CA5D8V6 355 aaPredicted RBP24.55■■□□□ 1.52
SMURF1-202ENST00000361368 NINLQ9Y2I6 1382 aa24.55■■□□□ 1.52
SMURF1-202ENST00000361368 NUCB2P80303 420 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms