RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
IFT140-201ENST00000361339 PTPRTO14522 1441 aa21.46■■□□□ 1.03
IFT140-201ENST00000361339 ADAMTS8Q9UP79 889 aa21.45■■□□□ 1.02
IFT140-201ENST00000361339 SPHKAPQ2M3C7 1700 aa21.45■■□□□ 1.02
IFT140-201ENST00000361339 ABCA9Q8IUA7 1624 aa21.44■■□□□ 1.02
IFT140-201ENST00000361339 CHGAP10645 457 aaKnown RBP21.44■■□□□ 1.02
IFT140-201ENST00000361339 RRP1P56182 461 aaKnown RBP21.44■■□□□ 1.02
IFT140-201ENST00000361339 RCAN3Q9UKA8 241 aa21.44■■□□□ 1.02
IFT140-201ENST00000361339 INO80Q9ULG1 1556 aaPredicted RBP21.43■■□□□ 1.02
IFT140-201ENST00000361339 KNSTRNQ9Y448 316 aa21.42■■□□□ 1.02
IFT140-201ENST00000361339 KANK1Q14678 1352 aa21.41■■□□□ 1.02
IFT140-201ENST00000361339 AMER1Q5JTC6 1135 aaPredicted RBP21.41■■□□□ 1.02
IFT140-201ENST00000361339 DEPDC5O75140 1603 aa21.41■■□□□ 1.02
IFT140-201ENST00000361339 PPP2R1AP30153 589 aa21.41■■□□□ 1.02
IFT140-201ENST00000361339 MROH1Q8NDA8 1641 aa21.4■■□□□ 1.02
IFT140-201ENST00000361339 GGT6Q6P531 493 aa21.4■■□□□ 1.02
IFT140-201ENST00000361339 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
IFT140-201ENST00000361339 ARAP3Q8WWN8 1544 aa21.39■■□□□ 1.02
IFT140-201ENST00000361339 CEP152O94986 1710 aa21.39■■□□□ 1.02
IFT140-201ENST00000361339 IQGAP1P46940 1657 aa21.39■■□□□ 1.02
IFT140-201ENST00000361339 SCAF11Q99590 1463 aaKnown RBP21.39■■□□□ 1.01
IFT140-201ENST00000361339 TET3O43151 1660 aa21.39■■□□□ 1.01
IFT140-201ENST00000361339 NUTM2DQ5VT03 806 aaPredicted RBP21.39■■□□□ 1.01
IFT140-201ENST00000361339 SKAP1Q86WV1 359 aa21.38■■□□□ 1.01
IFT140-201ENST00000361339 CFAP65Q6ZU64 1925 aaKnown RBP21.38■■□□□ 1.01
IFT140-201ENST00000361339 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
IFT140-201ENST00000361339 WASHC2CQ9Y4E1 1318 aa21.35■■□□□ 1.01
IFT140-201ENST00000361339 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
IFT140-201ENST00000361339 KIDINS220Q9ULH0 1771 aa21.34■■□□□ 1.01
IFT140-201ENST00000361339 BLMP54132 1417 aaPredicted RBP21.34■■□□□ 1.01
IFT140-201ENST00000361339 RAPGEF3O95398 923 aa21.33■■□□□ 1.01
IFT140-201ENST00000361339 SLC4A3P48751 1232 aa21.33■■□□□ 1
IFT140-201ENST00000361339 PLEKHH1Q9ULM0 1364 aa21.32■■□□□ 1
IFT140-201ENST00000361339 TMEM132EQ6IEE7 984 aa21.32■■□□□ 1
IFT140-201ENST00000361339 CARD14Q9BXL6 1004 aa21.32■■□□□ 1
IFT140-201ENST00000361339 C20orf194Q5TEA3 1177 aa21.31■■□□□ 1
IFT140-201ENST00000361339 PPRC1Q5VV67 1664 aaKnown RBP21.31■■□□□ 1
IFT140-201ENST00000361339 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
IFT140-201ENST00000361339 MROH2AA6NES4 1674 aa21.31■■□□□ 1
IFT140-201ENST00000361339 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
IFT140-201ENST00000361339 ABCA6Q8N139 1617 aa21.3■■□□□ 1
IFT140-201ENST00000361339 NOS1P29475 1434 aa21.3■■□□□ 1
IFT140-201ENST00000361339 WDR43Q15061 677 aaKnown RBP eCLIP21.29■■□□□ 1
IFT140-201ENST00000361339 MYOM1P52179 1685 aa21.28■■□□□ 1
IFT140-201ENST00000361339 PDE4AP27815 886 aa21.28■■□□□ 1
IFT140-201ENST00000361339 OSCARQ8IYS5 282 aa21.28■■□□□ 1
IFT140-201ENST00000361339 CD109Q6YHK3 1445 aa21.27■■□□□ 1
IFT140-201ENST00000361339 EFCAB6Q5THR3 1501 aa21.27■■□□□ 1
IFT140-201ENST00000361339 ERVK-7P63135 1459 aa21.27■■□□□ 1
IFT140-201ENST00000361339 PDE3BQ13370 1112 aa21.27■■□□□ 1
IFT140-201ENST00000361339 TNNT2P45379 298 aaPredicted RBP21.26■□□□□ 0.99
IFT140-201ENST00000361339 CRBNQ96SW2 442 aa21.26■□□□□ 0.99
IFT140-201ENST00000361339 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
IFT140-201ENST00000361339 NPATQ14207 1427 aa21.25■□□□□ 0.99
IFT140-201ENST00000361339 ZNF518AQ6AHZ1 1483 aa21.25■□□□□ 0.99
IFT140-201ENST00000361339 SPINK5Q9NQ38 1064 aaPredicted RBP21.24■□□□□ 0.99
IFT140-201ENST00000361339 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
IFT140-201ENST00000361339 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
IFT140-201ENST00000361339 SYNMO15061 1565 aa21.24■□□□□ 0.99
IFT140-201ENST00000361339 FRMPD1Q5SYB0 1578 aa21.23■□□□□ 0.99
IFT140-201ENST00000361339 EIF3AQ14152 1382 aaKnown RBP21.23■□□□□ 0.99
IFT140-201ENST00000361339 ZMYM4Q5VZL5 1548 aa21.22■□□□□ 0.99
IFT140-201ENST00000361339 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
IFT140-201ENST00000361339 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
IFT140-201ENST00000361339 APAF1O14727 1248 aa21.21■□□□□ 0.99
IFT140-201ENST00000361339 DUSP27Q5VZP5 1158 aa21.21■□□□□ 0.99
IFT140-201ENST00000361339 POGZQ7Z3K3 1410 aa21.21■□□□□ 0.99
IFT140-201ENST00000361339 KIF1BO60333 1816 aa21.2■□□□□ 0.98
IFT140-201ENST00000361339 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
IFT140-201ENST00000361339 STAC3Q96MF2 364 aa21.19■□□□□ 0.98
IFT140-201ENST00000361339 MYOM2P54296 1465 aa21.19■□□□□ 0.98
IFT140-201ENST00000361339 CENPJQ9HC77 1338 aaPredicted RBP21.17■□□□□ 0.98
IFT140-201ENST00000361339 KDM5AP29375 1690 aaKnown RBP21.17■□□□□ 0.98
IFT140-201ENST00000361339 ZNF521Q96K83 1311 aa21.16■□□□□ 0.98
IFT140-201ENST00000361339 IFT172Q9UG01 1749 aa21.15■□□□□ 0.98
IFT140-201ENST00000361339 PPM1GO15355 546 aaPredicted RBP21.15■□□□□ 0.98
IFT140-201ENST00000361339 GSE1Q14687 1217 aa21.14■□□□□ 0.97
IFT140-201ENST00000361339 BACH2Q9BYV9 841 aa21.14■□□□□ 0.97
IFT140-201ENST00000361339 ADGRB3O60242 1522 aa21.14■□□□□ 0.97
IFT140-201ENST00000361339 FRAT1Q92837 279 aaPredicted RBP21.14■□□□□ 0.97
IFT140-201ENST00000361339 TCERG1O14776 1098 aaKnown RBP21.13■□□□□ 0.97
IFT140-201ENST00000361339 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
IFT140-201ENST00000361339 PIK3C2GO75747 1445 aa21.13■□□□□ 0.97
IFT140-201ENST00000361339 DAXXQ9UER7 740 aaPredicted RBP21.13■□□□□ 0.97
IFT140-201ENST00000361339 KIAA1210Q9ULL0 1709 aa21.13■□□□□ 0.97
IFT140-201ENST00000361339 C14orf93Q9H972 538 aaKnown RBP21.12■□□□□ 0.97
IFT140-201ENST00000361339 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
IFT140-201ENST00000361339 LMTK2Q8IWU2 1503 aa21.11■□□□□ 0.97
IFT140-201ENST00000361339 NEUROD2Q15784 382 aa21.11■□□□□ 0.97
IFT140-201ENST00000361339 NFKBIBQ15653 356 aa21.11■□□□□ 0.97
IFT140-201ENST00000361339 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
IFT140-201ENST00000361339 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
IFT140-201ENST00000361339 NSD3Q9BZ95 1437 aa21.11■□□□□ 0.97
IFT140-201ENST00000361339 INSRP06213 1382 aa21.1■□□□□ 0.97
IFT140-201ENST00000361339 BCAR3O75815 825 aa21.09■□□□□ 0.97
IFT140-201ENST00000361339 SLFN5Q08AF3 891 aa21.09■□□□□ 0.97
IFT140-201ENST00000361339 STK26Q9P289 416 aa21.09■□□□□ 0.97
IFT140-201ENST00000361339 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
IFT140-201ENST00000361339 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
IFT140-201ENST00000361339 HECW2Q9P2P5 1572 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms