RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 C1orf141Q5JVX7 400 aa10.17□□□□□ -0.78
CTNND1-202ENST00000361332 TMEM87AQ8NBN3 555 aa10.17□□□□□ -0.78
CTNND1-202ENST00000361332 CARMIL1Q5VZK9 1371 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 BECN2A8MW95 431 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 TTC5Q8N0Z6 440 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 PDE4AP27815 886 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 RUFY1Q96T51 708 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 ANKRD62A6NC57 917 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 ST18O60284 1047 aa10.16□□□□□ -0.78
CTNND1-202ENST00000361332 DHX57Q6P158 1386 aaKnown RBP10.16□□□□□ -0.78
CTNND1-202ENST00000361332 ARHGAP35Q9NRY4 1499 aa10.15□□□□□ -0.78
CTNND1-202ENST00000361332 NEBLO76041 1014 aa10.15□□□□□ -0.78
CTNND1-202ENST00000361332 CPLX2Q6PUV4 134 aaKnown RBP10.15□□□□□ -0.78
CTNND1-202ENST00000361332 DCAF11Q8TEB1 546 aa10.15□□□□□ -0.78
CTNND1-202ENST00000361332 MAP7D2Q96T17 732 aa10.15□□□□□ -0.79
CTNND1-202ENST00000361332 ERICH2A1L162 156 aa10.15□□□□□ -0.79
CTNND1-202ENST00000361332 OFD1O75665 1012 aa10.15□□□□□ -0.79
CTNND1-202ENST00000361332 SKIDA1Q1XH10 827 aa10.14□□□□□ -0.79
CTNND1-202ENST00000361332 MTERF4Q7Z6M4 381 aaKnown RBP10.14□□□□□ -0.79
CTNND1-202ENST00000361332 CUX2O14529 1486 aa10.14□□□□□ -0.79
CTNND1-202ENST00000361332 CCDC27Q2M243 656 aa10.14□□□□□ -0.79
CTNND1-202ENST00000361332 FOXD4L6Q3SYB3 417 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-202ENST00000361332 FOXD4L3Q6VB84 417 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-202ENST00000361332 RILPL2Q969X0 211 aa10.14□□□□□ -0.79
CTNND1-202ENST00000361332 NEFHP12036 1026 aa10.13□□□□□ -0.79
CTNND1-202ENST00000361332 ZRSR2Q15696 482 aaKnown RBP10.13□□□□□ -0.79
CTNND1-202ENST00000361332 PLCD4Q9BRC7 762 aa10.13□□□□□ -0.79
CTNND1-202ENST00000361332 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
CTNND1-202ENST00000361332 PLCD3Q8N3E9 789 aa10.13□□□□□ -0.79
CTNND1-202ENST00000361332 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
CTNND1-202ENST00000361332 CPLX1O14810 134 aa10.12□□□□□ -0.79
CTNND1-202ENST00000361332 CCDC173Q0VFZ6 552 aa10.12□□□□□ -0.79
CTNND1-202ENST00000361332 FAM161AQ3B820 660 aa10.12□□□□□ -0.79
CTNND1-202ENST00000361332 CHMP4CQ96CF2 233 aa10.12□□□□□ -0.79
CTNND1-202ENST00000361332 NUTM2DQ5VT03 806 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-202ENST00000361332 WASHC2AQ641Q2 1341 aa10.11□□□□□ -0.79
CTNND1-202ENST00000361332 MYCNP04198 464 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-202ENST00000361332 SMC4Q9NTJ3 1288 aa10.11□□□□□ -0.79
CTNND1-202ENST00000361332 TRDNQ13061 729 aa10.11□□□□□ -0.79
CTNND1-202ENST00000361332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.11□□□□□ -0.792e-8■□□□□ 11.3
CTNND1-202ENST00000361332 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-202ENST00000361332 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
CTNND1-202ENST00000361332 CWC15Q9P013 229 aaKnown RBP10.1□□□□□ -0.79
CTNND1-202ENST00000361332 WIZO95785 1651 aa10.1□□□□□ -0.79
CTNND1-202ENST00000361332 CCDC191Q8NCU4 936 aa10.1□□□□□ -0.79
CTNND1-202ENST00000361332 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
CTNND1-202ENST00000361332 SYCP1Q15431 976 aa10.1□□□□□ -0.79
CTNND1-202ENST00000361332 HOOK1Q9UJC3 728 aaKnown RBP10.1□□□□□ -0.79
CTNND1-202ENST00000361332 CHMP4BP1P59074 171 aa10.09□□□□□ -0.79
CTNND1-202ENST00000361332 HMGN5P82970 282 aaKnown RBP10.09□□□□□ -0.79
CTNND1-202ENST00000361332 KTN1Q86UP2 1357 aaKnown RBP10.09□□□□□ -0.79
CTNND1-202ENST00000361332 MPHOSPH10O00566 681 aaKnown RBP10.09□□□□□ -0.79
CTNND1-202ENST00000361332 FOSBP53539 338 aa10.09□□□□□ -0.79
CTNND1-202ENST00000361332 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
CTNND1-202ENST00000361332 H0YHG0 523 aa10.09□□□□□ -0.79
CTNND1-202ENST00000361332 CLUAP1Q96AJ1 413 aa10.09□□□□□ -0.79
CTNND1-202ENST00000361332 ATP6V1DQ9Y5K8 247 aa10.09□□□□□ -0.79
CTNND1-202ENST00000361332 EIF2S2P20042 333 aaKnown RBP10.08□□□□□ -0.8
CTNND1-202ENST00000361332 KDM4AO75164 1064 aa10.08□□□□□ -0.8
CTNND1-202ENST00000361332 MPHOSPH9Q99550 1183 aa10.08□□□□□ -0.8
CTNND1-202ENST00000361332 HSP90B2PQ58FF3 399 aa10.08□□□□□ -0.8
CTNND1-202ENST00000361332 HSP90AB4PQ58FF6 505 aa10.08□□□□□ -0.8
CTNND1-202ENST00000361332 DIAPH3Q9NSV4 1193 aa10.08□□□□□ -0.8
CTNND1-202ENST00000361332 RAPGEF2Q9Y4G8 1499 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 TEFQ10587 303 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 IL27Q8NEV9 243 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 SEPT11Q9NVA2 429 aaKnown RBP10.07□□□□□ -0.8
CTNND1-202ENST00000361332 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-202ENST00000361332 ACBD3Q9H3P7 528 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 RBM10P98175 930 aaKnown RBP10.07□□□□□ -0.8
CTNND1-202ENST00000361332 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 IFT57Q9NWB7 429 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 ATP2B2Q01814 1243 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 DCTN1Q14203 1278 aa10.07□□□□□ -0.8
CTNND1-202ENST00000361332 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-202ENST00000361332 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
CTNND1-202ENST00000361332 MAP3K9P80192 1104 aa10.06□□□□□ -0.8
CTNND1-202ENST00000361332 FAM177BA6PVY3 158 aa10.06□□□□□ -0.8
CTNND1-202ENST00000361332 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-202ENST00000361332 KRT18P05783 430 aaKnown RBP10.06□□□□□ -0.8
CTNND1-202ENST00000361332 SEPT7Q16181 437 aaKnown RBP10.06□□□□□ -0.8
CTNND1-202ENST00000361332 ANKRD18AQ8IVF6 992 aa10.06□□□□□ -0.8
CTNND1-202ENST00000361332 CAGE1Q8TC20 777 aa10.06□□□□□ -0.8
CTNND1-202ENST00000361332 BRPF3Q9ULD4 1205 aa10.06□□□□□ -0.8
CTNND1-202ENST00000361332 RALBP1Q15311 655 aa10.06□□□□□ -0.8
CTNND1-202ENST00000361332 PLIN1O60240 522 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 PKD2Q13563 968 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 NFKBIBQ15653 356 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 L3MBTL2Q969R5 705 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 CHMP5Q9NZZ3 219 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 MYO6Q9UM54 1294 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 MATR3P43243 847 aaKnown RBP eCLIP10.05□□□□□ -0.86e-7■■■■□ 22.1
CTNND1-202ENST00000361332 SAFBQ15424 915 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTNND1-202ENST00000361332 WDHD1O75717 1129 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-202ENST00000361332 MRE11P49959 708 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 TERF2IPQ9NYB0 399 aa10.05□□□□□ -0.8
CTNND1-202ENST00000361332 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms