RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 MROH2AA6NES4 1674 aa16.27■□□□□ 0.2
RBM39-203ENST00000361162 CEP152O94986 1710 aa16.27■□□□□ 0.2
RBM39-203ENST00000361162 USP35Q9P2H5 1018 aa16.27■□□□□ 0.2
RBM39-203ENST00000361162 CAMSAP1Q5T5Y3 1602 aa16.27■□□□□ 0.19
RBM39-203ENST00000361162 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
RBM39-203ENST00000361162 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
RBM39-203ENST00000361162 ARHGAP31Q2M1Z3 1444 aa16.26■□□□□ 0.19
RBM39-203ENST00000361162 UBE2Q2Q8WVN8 375 aa16.26■□□□□ 0.19
RBM39-203ENST00000361162 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
RBM39-203ENST00000361162 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
RBM39-203ENST00000361162 GSE1Q14687 1217 aa16.25■□□□□ 0.19
RBM39-203ENST00000361162 PTPRTO14522 1441 aa16.25■□□□□ 0.19
RBM39-203ENST00000361162 RRP1P56182 461 aaKnown RBP16.24■□□□□ 0.19
RBM39-203ENST00000361162 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
RBM39-203ENST00000361162 PLIN1O60240 522 aa16.24■□□□□ 0.19
RBM39-203ENST00000361162 ABCC3O15438 1527 aa16.24■□□□□ 0.19
RBM39-203ENST00000361162 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
RBM39-203ENST00000361162 KANK1Q14678 1352 aa16.23■□□□□ 0.19
RBM39-203ENST00000361162 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
RBM39-203ENST00000361162 PIK3C2BO00750 1634 aa16.2■□□□□ 0.18
RBM39-203ENST00000361162 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
RBM39-203ENST00000361162 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
RBM39-203ENST00000361162 KDM5AP29375 1690 aaKnown RBP16.2■□□□□ 0.18
RBM39-203ENST00000361162 NUP155O75694 1391 aa16.19■□□□□ 0.18
RBM39-203ENST00000361162 LAMC1P11047 1609 aa16.17■□□□□ 0.18
RBM39-203ENST00000361162 CDCA7LQ96GN5 454 aa16.17■□□□□ 0.18
RBM39-203ENST00000361162 COL17A1Q9UMD9 1497 aaPredicted RBP16.16■□□□□ 0.18
RBM39-203ENST00000361162 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
RBM39-203ENST00000361162 SIGLEC1Q9BZZ2 1709 aa16.16■□□□□ 0.18
RBM39-203ENST00000361162 IFT172Q9UG01 1749 aa16.16■□□□□ 0.18
RBM39-203ENST00000361162 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
RBM39-203ENST00000361162 YEATS2Q9ULM3 1422 aa16.16■□□□□ 0.18
RBM39-203ENST00000361162 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
RBM39-203ENST00000361162 PREX1Q8TCU6 1659 aa16.13■□□□□ 0.17
RBM39-203ENST00000361162 UHRF1BP1Q6BDS2 1440 aa16.13■□□□□ 0.17
RBM39-203ENST00000361162 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
RBM39-203ENST00000361162 KIF1BO60333 1816 aa16.13■□□□□ 0.17
RBM39-203ENST00000361162 MS4A1P11836 297 aa16.13■□□□□ 0.17
RBM39-203ENST00000361162 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
RBM39-203ENST00000361162 CLTCL1P53675 1640 aa16.12■□□□□ 0.17
RBM39-203ENST00000361162 FRAT2O75474 233 aaPredicted RBP16.12■□□□□ 0.17
RBM39-203ENST00000361162 SPATA31D1Q6ZQQ2 1576 aa16.11■□□□□ 0.17
RBM39-203ENST00000361162 NOS1P29475 1434 aa16.1■□□□□ 0.17
RBM39-203ENST00000361162 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
RBM39-203ENST00000361162 DCAF11Q8TEB1 546 aa16.1■□□□□ 0.17
RBM39-203ENST00000361162 ADGRB3O60242 1522 aa16.1■□□□□ 0.17
RBM39-203ENST00000361162 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
RBM39-203ENST00000361162 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
RBM39-203ENST00000361162 USP47Q96K76 1375 aa16.08■□□□□ 0.17
RBM39-203ENST00000361162 CLTCQ00610 1675 aaKnown RBP16.07■□□□□ 0.16
RBM39-203ENST00000361162 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
RBM39-203ENST00000361162 MYOM2P54296 1465 aa16.07■□□□□ 0.16
RBM39-203ENST00000361162 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
RBM39-203ENST00000361162 SYNMO15061 1565 aa16.06■□□□□ 0.16
RBM39-203ENST00000361162 RAPGEF3O95398 923 aa16.05■□□□□ 0.16
RBM39-203ENST00000361162 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
RBM39-203ENST00000361162 PKD2Q13563 968 aa16.04■□□□□ 0.16
RBM39-203ENST00000361162 NPATQ14207 1427 aa16.04■□□□□ 0.16
RBM39-203ENST00000361162 KDM2AQ9Y2K7 1162 aa16.04■□□□□ 0.16
RBM39-203ENST00000361162 PPLO60437 1756 aa16.03■□□□□ 0.16
RBM39-203ENST00000361162 TRPM1Q7Z4N2 1603 aa16.02■□□□□ 0.16
RBM39-203ENST00000361162 FER1L4A9Z1Z3 1794 aa16.02■□□□□ 0.16
RBM39-203ENST00000361162 RALGAPBQ86X10 1494 aa16.02■□□□□ 0.15
RBM39-203ENST00000361162 ARXQ96QS3 562 aa16.02■□□□□ 0.15
RBM39-203ENST00000361162 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
RBM39-203ENST00000361162 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
RBM39-203ENST00000361162 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
RBM39-203ENST00000361162 RGS3P49796 1198 aa16.01■□□□□ 0.15
RBM39-203ENST00000361162 KIF3BO15066 747 aa16.01■□□□□ 0.15
RBM39-203ENST00000361162 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
RBM39-203ENST00000361162 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
RBM39-203ENST00000361162 LRPPRCP42704 1394 aaKnown RBP16■□□□□ 0.15
RBM39-203ENST00000361162 ERVK-7P63135 1459 aa16■□□□□ 0.15
RBM39-203ENST00000361162 ADAMTSL3P82987 1691 aa16■□□□□ 0.15
RBM39-203ENST00000361162 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
RBM39-203ENST00000361162 UGGT1Q9NYU2 1555 aa15.98■□□□□ 0.15
RBM39-203ENST00000361162 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
RBM39-203ENST00000361162 TMEM131LA2VDJ0 1609 aa15.97■□□□□ 0.15
RBM39-203ENST00000361162 POGKQ9P215 609 aa15.96■□□□□ 0.15
RBM39-203ENST00000361162 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.15
RBM39-203ENST00000361162 ZFYVE9O95405 1425 aa15.96■□□□□ 0.15
RBM39-203ENST00000361162 CC2D1BQ5T0F9 858 aaKnown RBP15.95■□□□□ 0.14
RBM39-203ENST00000361162 FAM43AQ8N2R8 423 aa15.95■□□□□ 0.14
RBM39-203ENST00000361162 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
RBM39-203ENST00000361162 C8orf34Q49A92 452 aa15.95■□□□□ 0.14
RBM39-203ENST00000361162 RALBP1Q15311 655 aa15.95■□□□□ 0.14
RBM39-203ENST00000361162 C3P01024 1663 aa15.94■□□□□ 0.14
RBM39-203ENST00000361162 ZNF142P52746 1687 aaPredicted RBP15.94■□□□□ 0.14
RBM39-203ENST00000361162 GPRASP1Q5JY77 1395 aa15.93■□□□□ 0.14
RBM39-203ENST00000361162 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
RBM39-203ENST00000361162 RRAGDQ9NQL2 400 aaPredicted RBP15.93■□□□□ 0.14
RBM39-203ENST00000361162 PDE3BQ13370 1112 aa15.93■□□□□ 0.14
RBM39-203ENST00000361162 PRAG1Q86YV5 1406 aa15.93■□□□□ 0.14
RBM39-203ENST00000361162 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
RBM39-203ENST00000361162 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
RBM39-203ENST00000361162 RPGRIP1LQ68CZ1 1315 aa15.92■□□□□ 0.14
RBM39-203ENST00000361162 NEXMIFQ5QGS0 1516 aa15.91■□□□□ 0.14
RBM39-203ENST00000361162 NLRP1Q9C000 1473 aa15.91■□□□□ 0.14
RBM39-203ENST00000361162 MYO3AQ8NEV4 1616 aa15.91■□□□□ 0.14
RBM39-203ENST00000361162 SLKQ9H2G2 1235 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms