RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 PPLO60437 1756 aa29.51■■■□□ 2.31
MAP1LC3A-201ENST00000360668 PLPPR3Q6T4P5 718 aa29.51■■■□□ 2.31
MAP1LC3A-201ENST00000360668 FER1L4A9Z1Z3 1794 aa29.5■■■□□ 2.31
MAP1LC3A-201ENST00000360668 NRXN1Q9ULB1 1477 aa29.49■■■□□ 2.31
MAP1LC3A-201ENST00000360668 KIAA1210Q9ULL0 1709 aa29.49■■■□□ 2.31
MAP1LC3A-201ENST00000360668 TMEM131LA2VDJ0 1609 aa29.48■■■□□ 2.31
MAP1LC3A-201ENST00000360668 NBPF1Q3BBV0 1214 aa29.45■■■□□ 2.31
MAP1LC3A-201ENST00000360668 CEBPAP49715 358 aaPredicted RBP29.44■■■□□ 2.3
MAP1LC3A-201ENST00000360668 NEXMIFQ5QGS0 1516 aa29.43■■■□□ 2.3
MAP1LC3A-201ENST00000360668 ADGRF5Q8IZF2 1346 aa29.43■■■□□ 2.3
MAP1LC3A-201ENST00000360668 MYO5BQ9ULV0 1848 aa29.41■■■□□ 2.3
MAP1LC3A-201ENST00000360668 POLR1AO95602 1720 aaPredicted RBP29.4■■■□□ 2.3
MAP1LC3A-201ENST00000360668 ZFYVE9O95405 1425 aa29.38■■■□□ 2.29
MAP1LC3A-201ENST00000360668 TNRQ92752 1358 aa29.37■■■□□ 2.29
MAP1LC3A-201ENST00000360668 PIK3C2GO75747 1445 aa29.37■■■□□ 2.29
MAP1LC3A-201ENST00000360668 WASHC2AQ641Q2 1341 aa29.37■■■□□ 2.29
MAP1LC3A-201ENST00000360668 VGFO15240 615 aaPredicted RBP29.36■■■□□ 2.29
MAP1LC3A-201ENST00000360668 DDX10Q13206 875 aaKnown RBP29.36■■■□□ 2.29
MAP1LC3A-201ENST00000360668 LMTK3Q96Q04 1460 aa29.35■■■□□ 2.29
MAP1LC3A-201ENST00000360668 C3P01024 1663 aa29.34■■■□□ 2.29
MAP1LC3A-201ENST00000360668 CCDC7Q96M83 1385 aa29.34■■■□□ 2.29
MAP1LC3A-201ENST00000360668 IQGAP1P46940 1657 aa29.34■■■□□ 2.29
MAP1LC3A-201ENST00000360668 ST20-MTHFSA0A0A6YYL1 179 aa29.33■■■□□ 2.29
MAP1LC3A-201ENST00000360668 A2ML1A8K2U0 1454 aa29.33■■■□□ 2.29
MAP1LC3A-201ENST00000360668 C11orf95C9JLR9 678 aaPredicted RBP29.32■■■□□ 2.28
MAP1LC3A-201ENST00000360668 STAG3Q9UJ98 1225 aa29.32■■■□□ 2.28
MAP1LC3A-201ENST00000360668 KDM5AP29375 1690 aaKnown RBP29.31■■■□□ 2.28
MAP1LC3A-201ENST00000360668 SETBP1Q9Y6X0 1596 aa29.31■■■□□ 2.28
MAP1LC3A-201ENST00000360668 SCAF11Q99590 1463 aaKnown RBP29.31■■■□□ 2.28
MAP1LC3A-201ENST00000360668 CFAP70Q5T0N1 1121 aa29.3■■■□□ 2.28
MAP1LC3A-201ENST00000360668 C14orf93Q9H972 538 aaKnown RBP29.29■■■□□ 2.28
MAP1LC3A-201ENST00000360668 KIF7Q2M1P5 1343 aa29.27■■■□□ 2.28
MAP1LC3A-201ENST00000360668 NLRP1Q9C000 1473 aa29.26■■■□□ 2.28
MAP1LC3A-201ENST00000360668 HSPA2P54652 639 aa29.25■■■□□ 2.27
MAP1LC3A-201ENST00000360668 MIER1Q8N108 512 aa29.25■■■□□ 2.27
MAP1LC3A-201ENST00000360668 EIF3AQ14152 1382 aaKnown RBP29.22■■■□□ 2.27
MAP1LC3A-201ENST00000360668 NUTM2DQ5VT03 806 aaPredicted RBP29.22■■■□□ 2.27
MAP1LC3A-201ENST00000360668 RIMS2Q9UQ26 1411 aa29.21■■■□□ 2.27
MAP1LC3A-201ENST00000360668 UBR1Q8IWV7 1749 aa29.21■■■□□ 2.27
MAP1LC3A-201ENST00000360668 ADGRB1O14514 1584 aa29.21■■■□□ 2.27
MAP1LC3A-201ENST00000360668 TESK2Q96S53 571 aa29.19■■■□□ 2.26
MAP1LC3A-201ENST00000360668 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.17■■■□□ 2.26
MAP1LC3A-201ENST00000360668 SETD1BQ9UPS6 1966 aaKnown RBP29.15■■■□□ 2.26
MAP1LC3A-201ENST00000360668 HDGFP51858 240 aaKnown RBP29.13■■■□□ 2.25
MAP1LC3A-201ENST00000360668 MYO3AQ8NEV4 1616 aa29.13■■■□□ 2.25
MAP1LC3A-201ENST00000360668 TMEM2Q9UHN6 1383 aa29.12■■■□□ 2.25
MAP1LC3A-201ENST00000360668 TMF1P82094 1093 aa29.1■■■□□ 2.25
MAP1LC3A-201ENST00000360668 SLC24A1O60721 1099 aa29.09■■■□□ 2.25
MAP1LC3A-201ENST00000360668 ALKQ9UM73 1620 aa29.09■■■□□ 2.25
MAP1LC3A-201ENST00000360668 TMEM132EQ6IEE7 984 aa29.07■■■□□ 2.24
MAP1LC3A-201ENST00000360668 ASXL1Q8IXJ9 1541 aa29.07■■■□□ 2.24
MAP1LC3A-201ENST00000360668 DISP3Q9P2K9 1392 aa29.07■■■□□ 2.24
MAP1LC3A-201ENST00000360668 ANP32CO43423 234 aa29.05■■■□□ 2.24
MAP1LC3A-201ENST00000360668 POLR3GLQ9BT43 218 aa29.05■■■□□ 2.24
MAP1LC3A-201ENST00000360668 SBNO2Q9Y2G9 1366 aa29.04■■■□□ 2.24
MAP1LC3A-201ENST00000360668 SLIT1O75093 1534 aa29.03■■■□□ 2.24
MAP1LC3A-201ENST00000360668 TRAK1Q9UPV9 953 aa29.02■■■□□ 2.24
MAP1LC3A-201ENST00000360668 CENPJQ9HC77 1338 aaPredicted RBP29.02■■■□□ 2.24
MAP1LC3A-201ENST00000360668 NRXN3Q9Y4C0 1643 aa29.01■■■□□ 2.24
MAP1LC3A-201ENST00000360668 SETD1AO15047 1707 aaKnown RBP29.01■■■□□ 2.24
MAP1LC3A-201ENST00000360668 ARHGAP23Q9P227 1491 aa29.01■■■□□ 2.23
MAP1LC3A-201ENST00000360668 ARHGEF28Q8N1W1 1705 aaKnown RBP29.01■■■□□ 2.23
MAP1LC3A-201ENST00000360668 CDCA8Q53HL2 280 aa29.01■■■□□ 2.23
MAP1LC3A-201ENST00000360668 CEP170BQ9Y4F5 1589 aaPredicted RBP28.99■■■□□ 2.23
MAP1LC3A-201ENST00000360668 THEMISQ8N1K5 641 aaPredicted RBP28.99■■■□□ 2.23
MAP1LC3A-201ENST00000360668 YTHDC2Q9H6S0 1430 aaKnown RBP28.98■■■□□ 2.23
MAP1LC3A-201ENST00000360668 QRICH2Q9H0J4 1663 aa28.97■■■□□ 2.23
MAP1LC3A-201ENST00000360668 ZNF142P52746 1687 aaPredicted RBP28.96■■■□□ 2.23
MAP1LC3A-201ENST00000360668 PLEKHG1Q9ULL1 1385 aa28.95■■■□□ 2.23
MAP1LC3A-201ENST00000360668 EID1Q9Y6B2 187 aa28.94■■■□□ 2.22
MAP1LC3A-201ENST00000360668 SENP3Q9H4L4 574 aaPredicted RBP28.93■■■□□ 2.22
MAP1LC3A-201ENST00000360668 LTKP29376 864 aa28.92■■■□□ 2.22
MAP1LC3A-201ENST00000360668 TXNDC2Q86VQ3 553 aa28.92■■■□□ 2.22
MAP1LC3A-201ENST00000360668 DMRT2Q9Y5R5 561 aa28.91■■■□□ 2.22
MAP1LC3A-201ENST00000360668 LRPPRCP42704 1394 aaKnown RBP28.91■■■□□ 2.22
MAP1LC3A-201ENST00000360668 DLC1Q96QB1 1528 aa28.9■■■□□ 2.22
MAP1LC3A-201ENST00000360668 STRCQ7RTU9 1775 aa28.89■■■□□ 2.22
MAP1LC3A-201ENST00000360668 STK26Q9P289 416 aa28.89■■■□□ 2.22
MAP1LC3A-201ENST00000360668 CCER2I3L3R5 266 aa28.88■■■□□ 2.21
MAP1LC3A-201ENST00000360668 ADAMTS13Q76LX8 1427 aa28.87■■■□□ 2.21
MAP1LC3A-201ENST00000360668 ABCC11Q96J66 1382 aa28.86■■■□□ 2.21
MAP1LC3A-201ENST00000360668 METP08581 1390 aa28.85■■■□□ 2.21
MAP1LC3A-201ENST00000360668 MED14O60244 1454 aa28.84■■■□□ 2.21
MAP1LC3A-201ENST00000360668 BCANQ96GW7 911 aa28.84■■■□□ 2.21
MAP1LC3A-201ENST00000360668 KNDC1Q76NI1 1749 aa28.83■■■□□ 2.21
MAP1LC3A-201ENST00000360668 PRKRIP1Q9H875 184 aaPredicted RBP28.83■■■□□ 2.21
MAP1LC3A-201ENST00000360668 MYOM1P52179 1685 aa28.82■■■□□ 2.2
MAP1LC3A-201ENST00000360668 PUS7Q96PZ0 661 aaKnown RBP28.82■■■□□ 2.2
MAP1LC3A-201ENST00000360668 NCKAP5LQ9HCH0 1330 aa28.81■■■□□ 2.2
MAP1LC3A-201ENST00000360668 DIP2AQ14689 1571 aa28.81■■■□□ 2.2
MAP1LC3A-201ENST00000360668 TECPR2O15040 1411 aa28.81■■■□□ 2.2
MAP1LC3A-201ENST00000360668 PRAM1Q96QH2 718 aa28.8■■■□□ 2.2
MAP1LC3A-201ENST00000360668 POGKQ9P215 609 aa28.79■■■□□ 2.2
MAP1LC3A-201ENST00000360668 EVC2Q86UK5 1308 aa28.79■■■□□ 2.2
MAP1LC3A-201ENST00000360668 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
MAP1LC3A-201ENST00000360668 TULP4Q9NRJ4 1543 aa28.78■■■□□ 2.2
MAP1LC3A-201ENST00000360668 PANK3Q9H999 370 aa28.78■■■□□ 2.2
MAP1LC3A-201ENST00000360668 CPS1P31327 1500 aa28.76■■■□□ 2.2
MAP1LC3A-201ENST00000360668 PER1O15534 1290 aaPredicted RBP28.76■■■□□ 2.19
MAP1LC3A-201ENST00000360668 CENPBP07199 599 aaPredicted RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms