RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
CTSE-202ENST00000360218 NOS1P29475 1434 aa15.28■□□□□ 0.04
CTSE-202ENST00000360218 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
CTSE-202ENST00000360218 ADGRF5Q8IZF2 1346 aa15.27■□□□□ 0.04
CTSE-202ENST00000360218 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.04
CTSE-202ENST00000360218 CHGAP10645 457 aaKnown RBP15.27■□□□□ 0.03
CTSE-202ENST00000360218 PREX1Q8TCU6 1659 aa15.27■□□□□ 0.03
CTSE-202ENST00000360218 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.03
CTSE-202ENST00000360218 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
CTSE-202ENST00000360218 REREQ9P2R6 1566 aa15.26■□□□□ 0.03
CTSE-202ENST00000360218 MRS2Q9HD23 443 aa15.24■□□□□ 0.03
CTSE-202ENST00000360218 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
CTSE-202ENST00000360218 MYO5BQ9ULV0 1848 aa15.23■□□□□ 0.03
CTSE-202ENST00000360218 AGLP35573 1532 aa15.22■□□□□ 0.03
CTSE-202ENST00000360218 TMF1P82094 1093 aa15.22■□□□□ 0.03
CTSE-202ENST00000360218 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
CTSE-202ENST00000360218 CLTCQ00610 1675 aaKnown RBP15.22■□□□□ 0.03
CTSE-202ENST00000360218 HNRNPUQ00839 825 aaKnown RBP eCLIP15.21■□□□□ 0.03
CTSE-202ENST00000360218 NEXMIFQ5QGS0 1516 aa15.21■□□□□ 0.02
CTSE-202ENST00000360218 SETBP1Q9Y6X0 1596 aa15.2■□□□□ 0.02
CTSE-202ENST00000360218 PIK3C2GO75747 1445 aa15.2■□□□□ 0.02
CTSE-202ENST00000360218 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
CTSE-202ENST00000360218 MYO3AQ8NEV4 1616 aa15.19■□□□□ 0.02
CTSE-202ENST00000360218 EIF3AQ14152 1382 aaKnown RBP15.19■□□□□ 0.02
CTSE-202ENST00000360218 MYOM1P52179 1685 aa15.19■□□□□ 0.02
CTSE-202ENST00000360218 KDM5AP29375 1690 aaKnown RBP15.17■□□□□ 0.02
CTSE-202ENST00000360218 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
CTSE-202ENST00000360218 TMEM131LA2VDJ0 1609 aa15.17■□□□□ 0.02
CTSE-202ENST00000360218 ERVK-7P63135 1459 aa15.16■□□□□ 0.02
CTSE-202ENST00000360218 IDI1Q13907 227 aa15.16■□□□□ 0.02
CTSE-202ENST00000360218 ADGRB1O14514 1584 aa15.16■□□□□ 0.02
CTSE-202ENST00000360218 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
CTSE-202ENST00000360218 FBXO31Q5XUX0 539 aaPredicted RBP15.15■□□□□ 0.02
CTSE-202ENST00000360218 PANK3Q9H999 370 aa15.15■□□□□ 0.02
CTSE-202ENST00000360218 NUTM2DQ5VT03 806 aaPredicted RBP15.14■□□□□ 0.01
CTSE-202ENST00000360218 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
CTSE-202ENST00000360218 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
CTSE-202ENST00000360218 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
CTSE-202ENST00000360218 RALBP1Q15311 655 aa15.13■□□□□ 0.01
CTSE-202ENST00000360218 C14orf93Q9H972 538 aaKnown RBP15.13■□□□□ 0.01
CTSE-202ENST00000360218 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
CTSE-202ENST00000360218 MLECQ14165 292 aa15.12■□□□□ 0.01
CTSE-202ENST00000360218 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
CTSE-202ENST00000360218 ARHGEF28Q8N1W1 1705 aaKnown RBP15.11■□□□□ 0.01
CTSE-202ENST00000360218 SPATA31D1Q6ZQQ2 1576 aa15.1■□□□□ 0.01
CTSE-202ENST00000360218 CDCA8Q53HL2 280 aa15.1■□□□□ 0.01
CTSE-202ENST00000360218 TMEM132EQ6IEE7 984 aa15.1■□□□□ 0.01
CTSE-202ENST00000360218 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
CTSE-202ENST00000360218 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
CTSE-202ENST00000360218 CC2D1BQ5T0F9 858 aaKnown RBP15.09■□□□□ 0.01
CTSE-202ENST00000360218 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
CTSE-202ENST00000360218 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
CTSE-202ENST00000360218 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0.01
CTSE-202ENST00000360218 TRAK1Q9UPV9 953 aa15.08■□□□□ 0.01
CTSE-202ENST00000360218 ASXL1Q8IXJ9 1541 aa15.08■□□□□ 0
CTSE-202ENST00000360218 CENPJQ9HC77 1338 aaPredicted RBP15.08■□□□□ 0
CTSE-202ENST00000360218 ZFYVE9O95405 1425 aa15.07■□□□□ 0
CTSE-202ENST00000360218 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
CTSE-202ENST00000360218 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
CTSE-202ENST00000360218 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
CTSE-202ENST00000360218 ZBED9Q6R2W3 1325 aa15.06■□□□□ 0
CTSE-202ENST00000360218 LRPPRCP42704 1394 aaKnown RBP15.04■□□□□ -0
CTSE-202ENST00000360218 NLRP13Q86W25 1043 aa15.04■□□□□ -0
CTSE-202ENST00000360218 A2ML1A8K2U0 1454 aa15.03■□□□□ -0
CTSE-202ENST00000360218 SLC24A1O60721 1099 aa15.02■□□□□ -0
CTSE-202ENST00000360218 KNSTRNQ9Y448 316 aa15.02■□□□□ -0
CTSE-202ENST00000360218 STAG3Q9UJ98 1225 aa15.02□□□□□ -0.01
CTSE-202ENST00000360218 FKBP8Q14318 412 aa15.01□□□□□ -0.01
CTSE-202ENST00000360218 AMER1Q5JTC6 1135 aaPredicted RBP15.01□□□□□ -0.01
CTSE-202ENST00000360218 ALKQ9UM73 1620 aa15.01□□□□□ -0.01
CTSE-202ENST00000360218 TULP4Q9NRJ4 1543 aa15.01□□□□□ -0.01
CTSE-202ENST00000360218 ZMYM3Q14202 1370 aa15□□□□□ -0.01
CTSE-202ENST00000360218 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
CTSE-202ENST00000360218 ESF1Q9H501 851 aaKnown RBP14.99□□□□□ -0.01
CTSE-202ENST00000360218 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
CTSE-202ENST00000360218 RIMS2Q9UQ26 1411 aa14.98□□□□□ -0.01
CTSE-202ENST00000360218 NEFLP07196 543 aa14.97□□□□□ -0.01
CTSE-202ENST00000360218 PTPRMP28827 1452 aa14.97□□□□□ -0.01
CTSE-202ENST00000360218 STK26Q9P289 416 aa14.97□□□□□ -0.01
CTSE-202ENST00000360218 NPC1L1Q9UHC9 1359 aa14.96□□□□□ -0.01
CTSE-202ENST00000360218 CARD14Q9BXL6 1004 aa14.96□□□□□ -0.01
CTSE-202ENST00000360218 YTHDC2Q9H6S0 1430 aaKnown RBP14.96□□□□□ -0.01
CTSE-202ENST00000360218 PPP2R1AP30153 589 aa14.96□□□□□ -0.02
CTSE-202ENST00000360218 BCANQ96GW7 911 aa14.96□□□□□ -0.02
CTSE-202ENST00000360218 NRXN3Q9Y4C0 1643 aa14.95□□□□□ -0.02
CTSE-202ENST00000360218 SAFB2Q14151 953 aaKnown RBP eCLIP14.95□□□□□ -0.02
CTSE-202ENST00000360218 UBR1Q8IWV7 1749 aa14.94□□□□□ -0.02
CTSE-202ENST00000360218 TNRQ92752 1358 aa14.94□□□□□ -0.02
CTSE-202ENST00000360218 EVC2Q86UK5 1308 aa14.93□□□□□ -0.02
CTSE-202ENST00000360218 NSD3Q9BZ95 1437 aa14.93□□□□□ -0.02
CTSE-202ENST00000360218 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
CTSE-202ENST00000360218 SLC12A5Q9H2X9 1139 aa14.93□□□□□ -0.02
CTSE-202ENST00000360218 SMG6Q86US8 1419 aaKnown RBP14.92□□□□□ -0.02
CTSE-202ENST00000360218 USP32Q8NFA0 1604 aa14.92□□□□□ -0.02
CTSE-202ENST00000360218 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
CTSE-202ENST00000360218 FER1L4A9Z1Z3 1794 aa14.91□□□□□ -0.02
CTSE-202ENST00000360218 C3P01024 1663 aa14.91□□□□□ -0.02
CTSE-202ENST00000360218 PRAM1Q96QH2 718 aa14.9□□□□□ -0.02
CTSE-202ENST00000360218 CABP2Q9NPB3 220 aa14.9□□□□□ -0.02
CTSE-202ENST00000360218 IRX6P78412 446 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms