RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.69■□□□□ 0.74
UBAP1-202ENST00000359544 SHANK2Q9UPX8 1470 aa19.68■□□□□ 0.74
UBAP1-202ENST00000359544 RCAN3Q9UKA8 241 aa19.68■□□□□ 0.74
UBAP1-202ENST00000359544 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
UBAP1-202ENST00000359544 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
UBAP1-202ENST00000359544 FOXD1Q16676 465 aa19.66■□□□□ 0.74
UBAP1-202ENST00000359544 KTN1Q86UP2 1357 aaKnown RBP19.66■□□□□ 0.74
UBAP1-202ENST00000359544 BRD4O60885 1362 aaPredicted RBP19.65■□□□□ 0.74
UBAP1-202ENST00000359544 PDE3BQ13370 1112 aa19.64■□□□□ 0.73
UBAP1-202ENST00000359544 USP47Q96K76 1375 aa19.64■□□□□ 0.73
UBAP1-202ENST00000359544 RSPH6AQ9H0K4 717 aa19.63■□□□□ 0.73
UBAP1-202ENST00000359544 EIF5BO60841 1220 aaKnown RBP19.63■□□□□ 0.73
UBAP1-202ENST00000359544 DUOX2Q9NRD8 1548 aa19.63■□□□□ 0.73
UBAP1-202ENST00000359544 ROCK1Q13464 1354 aa19.62■□□□□ 0.73
UBAP1-202ENST00000359544 CLTCQ00610 1675 aaKnown RBP19.62■□□□□ 0.73
UBAP1-202ENST00000359544 ZMYM3Q14202 1370 aa19.62■□□□□ 0.73
UBAP1-202ENST00000359544 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
UBAP1-202ENST00000359544 CNGB1Q14028 1251 aaPredicted RBP19.61■□□□□ 0.73
UBAP1-202ENST00000359544 FRAT1Q92837 279 aaPredicted RBP19.61■□□□□ 0.73
UBAP1-202ENST00000359544 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
UBAP1-202ENST00000359544 HSPA2P54652 639 aa19.6■□□□□ 0.73
UBAP1-202ENST00000359544 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
UBAP1-202ENST00000359544 MYBBP1AQ9BQG0 1328 aaKnown RBP19.6■□□□□ 0.73
UBAP1-202ENST00000359544 ADGRL2O95490 1459 aa19.59■□□□□ 0.73
UBAP1-202ENST00000359544 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.73
UBAP1-202ENST00000359544 RALBP1Q15311 655 aa19.58■□□□□ 0.72
UBAP1-202ENST00000359544 C3P01024 1663 aa19.58■□□□□ 0.72
UBAP1-202ENST00000359544 ANKRD50Q9ULJ7 1429 aa19.57■□□□□ 0.72
UBAP1-202ENST00000359544 ERBINQ96RT1 1412 aa19.56■□□□□ 0.72
UBAP1-202ENST00000359544 SLC4A1APQ9BWU0 796 aaKnown RBP19.56■□□□□ 0.72
UBAP1-202ENST00000359544 MROH1Q8NDA8 1641 aa19.56■□□□□ 0.72
UBAP1-202ENST00000359544 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
UBAP1-202ENST00000359544 KDM5DQ9BY66 1539 aa19.52■□□□□ 0.71
UBAP1-202ENST00000359544 RNF17Q9BXT8 1623 aaKnown RBP19.51■□□□□ 0.71
UBAP1-202ENST00000359544 EIF2AK4Q9P2K8 1649 aaKnown RBP19.51■□□□□ 0.71
UBAP1-202ENST00000359544 ABCC3O15438 1527 aa19.5■□□□□ 0.71
UBAP1-202ENST00000359544 LMTK3Q96Q04 1460 aa19.5■□□□□ 0.71
UBAP1-202ENST00000359544 CEP152O94986 1710 aa19.5■□□□□ 0.71
UBAP1-202ENST00000359544 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
UBAP1-202ENST00000359544 RALGAPBQ86X10 1494 aa19.48■□□□□ 0.71
UBAP1-202ENST00000359544 E9PCH4 1651 aa19.47■□□□□ 0.71
UBAP1-202ENST00000359544 CFAP65Q6ZU64 1925 aaKnown RBP19.46■□□□□ 0.71
UBAP1-202ENST00000359544 INSRP06213 1382 aa19.46■□□□□ 0.71
UBAP1-202ENST00000359544 UHRF1BP1Q6BDS2 1440 aa19.46■□□□□ 0.71
UBAP1-202ENST00000359544 PZPP20742 1482 aa19.46■□□□□ 0.71
UBAP1-202ENST00000359544 PRDM15P57071 1507 aaPredicted RBP19.46■□□□□ 0.71
UBAP1-202ENST00000359544 MROH2AA6NES4 1674 aa19.46■□□□□ 0.71
UBAP1-202ENST00000359544 NLRP13Q86W25 1043 aa19.46■□□□□ 0.71
UBAP1-202ENST00000359544 CRBNQ96SW2 442 aa19.46■□□□□ 0.71
UBAP1-202ENST00000359544 FAM161AQ3B820 660 aa19.45■□□□□ 0.7
UBAP1-202ENST00000359544 KANK1Q14678 1352 aa19.45■□□□□ 0.7
UBAP1-202ENST00000359544 SLC4A3P48751 1232 aa19.44■□□□□ 0.7
UBAP1-202ENST00000359544 DEPDC5O75140 1603 aa19.44■□□□□ 0.7
UBAP1-202ENST00000359544 ZNF326Q5BKZ1 582 aaKnown RBP19.44■□□□□ 0.7
UBAP1-202ENST00000359544 CENPQQ7L2Z9 268 aaPredicted RBP19.43■□□□□ 0.7
UBAP1-202ENST00000359544 NUP155O75694 1391 aa19.43■□□□□ 0.7
UBAP1-202ENST00000359544 KDM2BQ8NHM5 1336 aa19.42■□□□□ 0.7
UBAP1-202ENST00000359544 CAMSAP1Q5T5Y3 1602 aa19.41■□□□□ 0.7
UBAP1-202ENST00000359544 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
UBAP1-202ENST00000359544 NPATQ14207 1427 aa19.41■□□□□ 0.7
UBAP1-202ENST00000359544 TNRQ92752 1358 aa19.4■□□□□ 0.7
UBAP1-202ENST00000359544 PARD3Q8TEW0 1356 aa19.4■□□□□ 0.7
UBAP1-202ENST00000359544 PLIN1O60240 522 aa19.4■□□□□ 0.7
UBAP1-202ENST00000359544 PREX1Q8TCU6 1659 aa19.4■□□□□ 0.7
UBAP1-202ENST00000359544 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
UBAP1-202ENST00000359544 GLIPR1L2Q4G1C9 344 aa19.38■□□□□ 0.69
UBAP1-202ENST00000359544 CDCA7LQ96GN5 454 aa19.38■□□□□ 0.69
UBAP1-202ENST00000359544 VWDEQ8N2E2 1590 aa19.38■□□□□ 0.69
UBAP1-202ENST00000359544 BLMP54132 1417 aaPredicted RBP19.38■□□□□ 0.69
UBAP1-202ENST00000359544 C8orf34Q49A92 452 aa19.37■□□□□ 0.69
UBAP1-202ENST00000359544 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
UBAP1-202ENST00000359544 ZC3H13Q5T200 1668 aaKnown RBP19.37■□□□□ 0.69
UBAP1-202ENST00000359544 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
UBAP1-202ENST00000359544 SETD1BQ9UPS6 1966 aaKnown RBP19.36■□□□□ 0.69
UBAP1-202ENST00000359544 ERVK-7P63135 1459 aa19.36■□□□□ 0.69
UBAP1-202ENST00000359544 MYO3AQ8NEV4 1616 aa19.36■□□□□ 0.69
UBAP1-202ENST00000359544 UNC13BO14795 1591 aa19.36■□□□□ 0.69
UBAP1-202ENST00000359544 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.69
UBAP1-202ENST00000359544 FAM135AQ9P2D6 1515 aa19.33■□□□□ 0.69
UBAP1-202ENST00000359544 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
UBAP1-202ENST00000359544 NCKAP5LQ9HCH0 1330 aa19.32■□□□□ 0.68
UBAP1-202ENST00000359544 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
UBAP1-202ENST00000359544 LMTK2Q8IWU2 1503 aa19.32■□□□□ 0.68
UBAP1-202ENST00000359544 ST20-MTHFSA0A0A6YYL1 179 aa19.31■□□□□ 0.68
UBAP1-202ENST00000359544 CEP170BQ9Y4F5 1589 aaPredicted RBP19.31■□□□□ 0.68
UBAP1-202ENST00000359544 PKNOX2Q96KN3 472 aa19.31■□□□□ 0.68
UBAP1-202ENST00000359544 SPATA31D1Q6ZQQ2 1576 aa19.3■□□□□ 0.68
UBAP1-202ENST00000359544 ARHGAP31Q2M1Z3 1444 aa19.3■□□□□ 0.68
UBAP1-202ENST00000359544 IDI1Q13907 227 aa19.3■□□□□ 0.68
UBAP1-202ENST00000359544 PKD2Q13563 968 aa19.29■□□□□ 0.68
UBAP1-202ENST00000359544 IQGAP3Q86VI3 1631 aa19.28■□□□□ 0.68
UBAP1-202ENST00000359544 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
UBAP1-202ENST00000359544 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.28■□□□□ 0.68
UBAP1-202ENST00000359544 A2ML1A8K2U0 1454 aa19.27■□□□□ 0.68
UBAP1-202ENST00000359544 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.68
UBAP1-202ENST00000359544 TET3O43151 1660 aa19.27■□□□□ 0.68
UBAP1-202ENST00000359544 SYNMO15061 1565 aa19.27■□□□□ 0.67
UBAP1-202ENST00000359544 VIRMAQ69YN4 1812 aaKnown RBP19.26■□□□□ 0.67
UBAP1-202ENST00000359544 CHGAP10645 457 aaKnown RBP19.26■□□□□ 0.67
UBAP1-202ENST00000359544 STAG3Q9UJ98 1225 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms