RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ARHGAP31Q2M1Z3 1444 aa19.85■□□□□ 0.77
PDLIM5-203ENST00000359265 KIF1BO60333 1816 aa19.84■□□□□ 0.77
PDLIM5-203ENST00000359265 CFAP65Q6ZU64 1925 aaKnown RBP19.84■□□□□ 0.77
PDLIM5-203ENST00000359265 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
PDLIM5-203ENST00000359265 NEURL4Q96JN8 1562 aa19.8■□□□□ 0.76
PDLIM5-203ENST00000359265 ZNF316A6NFI3 1004 aaPredicted RBP19.77■□□□□ 0.76
PDLIM5-203ENST00000359265 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
PDLIM5-203ENST00000359265 POLR1AO95602 1720 aaPredicted RBP19.73■□□□□ 0.75
PDLIM5-203ENST00000359265 A2ML1A8K2U0 1454 aa19.73■□□□□ 0.75
PDLIM5-203ENST00000359265 NOS1P29475 1434 aa19.73■□□□□ 0.75
PDLIM5-203ENST00000359265 PIK3C2BO00750 1634 aa19.73■□□□□ 0.75
PDLIM5-203ENST00000359265 UGGT1Q9NYU2 1555 aa19.72■□□□□ 0.75
PDLIM5-203ENST00000359265 SYNMO15061 1565 aa19.71■□□□□ 0.75
PDLIM5-203ENST00000359265 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
PDLIM5-203ENST00000359265 STRCP1A6NGW2 1772 aa19.71■□□□□ 0.75
PDLIM5-203ENST00000359265 ERVK-7P63135 1459 aa19.71■□□□□ 0.75
PDLIM5-203ENST00000359265 IFT172Q9UG01 1749 aa19.71■□□□□ 0.75
PDLIM5-203ENST00000359265 ADGRB3O60242 1522 aa19.68■□□□□ 0.74
PDLIM5-203ENST00000359265 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
PDLIM5-203ENST00000359265 TRPM1Q7Z4N2 1603 aa19.68■□□□□ 0.74
PDLIM5-203ENST00000359265 RALGAPBQ86X10 1494 aa19.67■□□□□ 0.74
PDLIM5-203ENST00000359265 NBPF8Q3BBV2 869 aa19.65■□□□□ 0.74
PDLIM5-203ENST00000359265 UPF1Q92900 1129 aaKnown RBP eCLIP19.65■□□□□ 0.74
PDLIM5-203ENST00000359265 SLC52A1Q9NWF4 448 aa19.65■□□□□ 0.74
PDLIM5-203ENST00000359265 FBXO31Q5XUX0 539 aaPredicted RBP19.64■□□□□ 0.73
PDLIM5-203ENST00000359265 ANKLE2Q86XL3 938 aa19.64■□□□□ 0.73
PDLIM5-203ENST00000359265 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
PDLIM5-203ENST00000359265 PPLO60437 1756 aa19.64■□□□□ 0.73
PDLIM5-203ENST00000359265 PRAG1Q86YV5 1406 aa19.63■□□□□ 0.73
PDLIM5-203ENST00000359265 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
PDLIM5-203ENST00000359265 MYO5BQ9ULV0 1848 aa19.62■□□□□ 0.73
PDLIM5-203ENST00000359265 LAMC1P11047 1609 aa19.62■□□□□ 0.73
PDLIM5-203ENST00000359265 NPHP4O75161 1426 aaPredicted RBP19.61■□□□□ 0.73
PDLIM5-203ENST00000359265 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
PDLIM5-203ENST00000359265 MYOM2P54296 1465 aa19.6■□□□□ 0.73
PDLIM5-203ENST00000359265 KIAA1210Q9ULL0 1709 aa19.6■□□□□ 0.73
PDLIM5-203ENST00000359265 STAC3Q96MF2 364 aa19.6■□□□□ 0.73
PDLIM5-203ENST00000359265 KDM2AQ9Y2K7 1162 aa19.6■□□□□ 0.73
PDLIM5-203ENST00000359265 TNRQ92752 1358 aa19.59■□□□□ 0.73
PDLIM5-203ENST00000359265 MED14O60244 1454 aa19.59■□□□□ 0.73
PDLIM5-203ENST00000359265 KDM5AP29375 1690 aaKnown RBP19.59■□□□□ 0.73
PDLIM5-203ENST00000359265 TMEM131LA2VDJ0 1609 aa19.57■□□□□ 0.72
PDLIM5-203ENST00000359265 NLRP1Q9C000 1473 aa19.56■□□□□ 0.72
PDLIM5-203ENST00000359265 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDLIM5-203ENST00000359265 IDI1Q13907 227 aa19.55■□□□□ 0.72
PDLIM5-203ENST00000359265 CHGAP10645 457 aaKnown RBP19.54■□□□□ 0.72
PDLIM5-203ENST00000359265 THEMISQ8N1K5 641 aaPredicted RBP19.54■□□□□ 0.72
PDLIM5-203ENST00000359265 IQGAP1P46940 1657 aa19.52■□□□□ 0.72
PDLIM5-203ENST00000359265 NEXMIFQ5QGS0 1516 aa19.52■□□□□ 0.72
PDLIM5-203ENST00000359265 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
PDLIM5-203ENST00000359265 XIRP1Q702N8 1843 aaKnown RBP19.52■□□□□ 0.72
PDLIM5-203ENST00000359265 ROCK2O75116 1388 aaKnown RBP19.52■□□□□ 0.72
PDLIM5-203ENST00000359265 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
PDLIM5-203ENST00000359265 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
PDLIM5-203ENST00000359265 NRXN1Q9ULB1 1477 aa19.5■□□□□ 0.71
PDLIM5-203ENST00000359265 HSPA5P11021 654 aaKnown RBP19.5■□□□□ 0.71
PDLIM5-203ENST00000359265 FAM135BQ49AJ0 1406 aa19.5■□□□□ 0.71
PDLIM5-203ENST00000359265 SRCAPQ6ZRS2 3230 aa19.49■□□□□ 0.71
PDLIM5-203ENST00000359265 GPRASP1Q5JY77 1395 aa19.49■□□□□ 0.71
PDLIM5-203ENST00000359265 USP47Q96K76 1375 aa19.49■□□□□ 0.71
PDLIM5-203ENST00000359265 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
PDLIM5-203ENST00000359265 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
PDLIM5-203ENST00000359265 HIRIP3Q9BW71 556 aaPredicted RBP19.45■□□□□ 0.7
PDLIM5-203ENST00000359265 SETBP1Q9Y6X0 1596 aa19.44■□□□□ 0.7
PDLIM5-203ENST00000359265 PIK3C2GO75747 1445 aa19.42■□□□□ 0.7
PDLIM5-203ENST00000359265 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
PDLIM5-203ENST00000359265 VGFO15240 615 aaPredicted RBP19.42■□□□□ 0.7
PDLIM5-203ENST00000359265 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
PDLIM5-203ENST00000359265 ADGRF5Q8IZF2 1346 aa19.4■□□□□ 0.7
PDLIM5-203ENST00000359265 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
PDLIM5-203ENST00000359265 ROBO1Q9Y6N7 1651 aa19.4■□□□□ 0.7
PDLIM5-203ENST00000359265 NBPF1Q3BBV0 1214 aa19.39■□□□□ 0.69
PDLIM5-203ENST00000359265 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.39■□□□□ 0.69
PDLIM5-203ENST00000359265 SLIT1O75093 1534 aa19.37■□□□□ 0.69
PDLIM5-203ENST00000359265 SCAF11Q99590 1463 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-203ENST00000359265 TMEM2Q9UHN6 1383 aa19.37■□□□□ 0.69
PDLIM5-203ENST00000359265 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
PDLIM5-203ENST00000359265 EIF3AQ14152 1382 aaKnown RBP19.33■□□□□ 0.69
PDLIM5-203ENST00000359265 CCDC7Q96M83 1385 aa19.33■□□□□ 0.69
PDLIM5-203ENST00000359265 LTKP29376 864 aa19.33■□□□□ 0.68
PDLIM5-203ENST00000359265 RBM33Q96EV2 1170 aaKnown RBP19.33■□□□□ 0.68
PDLIM5-203ENST00000359265 ADGRB1O14514 1584 aa19.32■□□□□ 0.68
PDLIM5-203ENST00000359265 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
PDLIM5-203ENST00000359265 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
PDLIM5-203ENST00000359265 LRP6O75581 1613 aa19.32■□□□□ 0.68
PDLIM5-203ENST00000359265 WASHC2AQ641Q2 1341 aa19.31■□□□□ 0.68
PDLIM5-203ENST00000359265 C14orf93Q9H972 538 aaKnown RBP19.31■□□□□ 0.68
PDLIM5-203ENST00000359265 JCADQ9P266 1359 aa19.31■□□□□ 0.68
PDLIM5-203ENST00000359265 ST20-MTHFSA0A0A6YYL1 179 aa19.3■□□□□ 0.68
PDLIM5-203ENST00000359265 NUTM2DQ5VT03 806 aaPredicted RBP19.3■□□□□ 0.68
PDLIM5-203ENST00000359265 ARHGEF28Q8N1W1 1705 aaKnown RBP19.3■□□□□ 0.68
PDLIM5-203ENST00000359265 TMEM94Q12767 1356 aa19.3■□□□□ 0.68
PDLIM5-203ENST00000359265 DDX10Q13206 875 aaKnown RBP19.29■□□□□ 0.68
PDLIM5-203ENST00000359265 ZNF772Q68DY9 489 aaPredicted RBP19.29■□□□□ 0.68
PDLIM5-203ENST00000359265 PHLPP1O60346 1717 aa19.28■□□□□ 0.68
PDLIM5-203ENST00000359265 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
PDLIM5-203ENST00000359265 RXRBP28702 533 aa19.28■□□□□ 0.68
PDLIM5-203ENST00000359265 NRXN3Q9Y4C0 1643 aa19.28■□□□□ 0.68
PDLIM5-203ENST00000359265 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
PDLIM5-203ENST00000359265 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms