RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 SLIT1O75093 1534 aa15.28■□□□□ 0.04
TRAPPC4-201ENST00000359005 EFCAB6Q5THR3 1501 aa15.28■□□□□ 0.04
TRAPPC4-201ENST00000359005 EID1Q9Y6B2 187 aa15.28■□□□□ 0.04
TRAPPC4-201ENST00000359005 PIP4K2BP78356 416 aa15.27■□□□□ 0.04
TRAPPC4-201ENST00000359005 UBR1Q8IWV7 1749 aa15.26■□□□□ 0.03
TRAPPC4-201ENST00000359005 NUTM2DQ5VT03 806 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-201ENST00000359005 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-201ENST00000359005 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
TRAPPC4-201ENST00000359005 RBM33Q96EV2 1170 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-201ENST00000359005 HSPA1LP34931 641 aa15.24■□□□□ 0.03
TRAPPC4-201ENST00000359005 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
TRAPPC4-201ENST00000359005 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-201ENST00000359005 CPS1P31327 1500 aa15.22■□□□□ 0.03
TRAPPC4-201ENST00000359005 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC4-201ENST00000359005 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-201ENST00000359005 CCDC144AA2RUR9 1427 aa15.21■□□□□ 0.03
TRAPPC4-201ENST00000359005 ZFYVE9O95405 1425 aa15.21■□□□□ 0.03
TRAPPC4-201ENST00000359005 TOM1O60784 492 aa15.21■□□□□ 0.03
TRAPPC4-201ENST00000359005 IQGAP1P46940 1657 aa15.21■□□□□ 0.03
TRAPPC4-201ENST00000359005 ALKQ9UM73 1620 aa15.21■□□□□ 0.02
TRAPPC4-201ENST00000359005 KCNA6P17658 529 aa15.2■□□□□ 0.02
TRAPPC4-201ENST00000359005 FOXD1Q16676 465 aa15.2■□□□□ 0.02
TRAPPC4-201ENST00000359005 ILDR2Q71H61 639 aa15.2■□□□□ 0.02
TRAPPC4-201ENST00000359005 RIMS2Q9UQ26 1411 aa15.19■□□□□ 0.02
TRAPPC4-201ENST00000359005 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
TRAPPC4-201ENST00000359005 TET3O43151 1660 aa15.19■□□□□ 0.02
TRAPPC4-201ENST00000359005 L3MBTL2Q969R5 705 aa15.18■□□□□ 0.02
TRAPPC4-201ENST00000359005 BCANQ96GW7 911 aa15.18■□□□□ 0.02
TRAPPC4-201ENST00000359005 ADGRB3O60242 1522 aa15.17■□□□□ 0.02
TRAPPC4-201ENST00000359005 STAC3Q96MF2 364 aa15.17■□□□□ 0.02
TRAPPC4-201ENST00000359005 DISP3Q9P2K9 1392 aa15.16■□□□□ 0.02
TRAPPC4-201ENST00000359005 TMEM94Q12767 1356 aa15.15■□□□□ 0.02
TRAPPC4-201ENST00000359005 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC4-201ENST00000359005 E9PCH4 1651 aa15.15■□□□□ 0.02
TRAPPC4-201ENST00000359005 PLEKHG1Q9ULL1 1385 aa15.14■□□□□ 0.01
TRAPPC4-201ENST00000359005 TBX22Q9Y458 520 aa15.14■□□□□ 0.01
TRAPPC4-201ENST00000359005 ADAMTS13Q76LX8 1427 aa15.13■□□□□ 0.01
TRAPPC4-201ENST00000359005 TMEM131LA2VDJ0 1609 aa15.13■□□□□ 0.01
TRAPPC4-201ENST00000359005 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAPPC4-201ENST00000359005 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAPPC4-201ENST00000359005 HDGFP51858 240 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-201ENST00000359005 KDM5AP29375 1690 aaKnown RBP15.09■□□□□ 0.01
TRAPPC4-201ENST00000359005 TRPM2O94759 1503 aa15.09■□□□□ 0.01
TRAPPC4-201ENST00000359005 SPHKAPQ2M3C7 1700 aa15.09■□□□□ 0.01
TRAPPC4-201ENST00000359005 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
TRAPPC4-201ENST00000359005 PTPRUQ92729 1446 aa15.08■□□□□ 0
TRAPPC4-201ENST00000359005 AMOTL2Q9Y2J4 779 aa15.06■□□□□ 0
TRAPPC4-201ENST00000359005 METP08581 1390 aa15.04■□□□□ -0
TRAPPC4-201ENST00000359005 DCAF11Q8TEB1 546 aa15.04■□□□□ -0
TRAPPC4-201ENST00000359005 MYO5BQ9ULV0 1848 aa15.03■□□□□ -0
TRAPPC4-201ENST00000359005 SLAIN2Q9P270 581 aa15.03■□□□□ -0
TRAPPC4-201ENST00000359005 RALGAPBQ86X10 1494 aa15.02■□□□□ -0
TRAPPC4-201ENST00000359005 FAM135BQ49AJ0 1406 aa15.02■□□□□ -0
TRAPPC4-201ENST00000359005 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
TRAPPC4-201ENST00000359005 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
TRAPPC4-201ENST00000359005 NKTRP30414 1462 aaKnown RBP15.01□□□□□ -0.01
TRAPPC4-201ENST00000359005 CLTCL1P53675 1640 aa14.99□□□□□ -0.01
TRAPPC4-201ENST00000359005 KIF1BO60333 1816 aa14.99□□□□□ -0.01
TRAPPC4-201ENST00000359005 NBPF8Q3BBV2 869 aa14.99□□□□□ -0.01
TRAPPC4-201ENST00000359005 MSH6P52701 1360 aa14.98□□□□□ -0.01
TRAPPC4-201ENST00000359005 PIK3R4Q99570 1358 aa14.98□□□□□ -0.01
TRAPPC4-201ENST00000359005 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
TRAPPC4-201ENST00000359005 RGL3Q3MIN7 710 aa14.98□□□□□ -0.01
TRAPPC4-201ENST00000359005 C19orf44Q9H6X5 657 aa14.98□□□□□ -0.01
TRAPPC4-201ENST00000359005 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
TRAPPC4-201ENST00000359005 C14orf37Q86TY3 774 aa14.97□□□□□ -0.01
TRAPPC4-201ENST00000359005 CARD11Q9BXL7 1154 aa14.97□□□□□ -0.01
TRAPPC4-201ENST00000359005 RGS17Q9UGC6 210 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC4-201ENST00000359005 SPATA31E1Q6ZUB1 1445 aa14.97□□□□□ -0.01
TRAPPC4-201ENST00000359005 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
TRAPPC4-201ENST00000359005 NEXMIFQ5QGS0 1516 aa14.96□□□□□ -0.02
TRAPPC4-201ENST00000359005 ROCK2O75116 1388 aaKnown RBP14.96□□□□□ -0.02
TRAPPC4-201ENST00000359005 LAMC1P11047 1609 aa14.95□□□□□ -0.02
TRAPPC4-201ENST00000359005 RPGRIP1LQ68CZ1 1315 aa14.95□□□□□ -0.02
TRAPPC4-201ENST00000359005 ADGRF5Q8IZF2 1346 aa14.95□□□□□ -0.02
TRAPPC4-201ENST00000359005 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
TRAPPC4-201ENST00000359005 NRXN3Q9Y4C0 1643 aa14.95□□□□□ -0.02
TRAPPC4-201ENST00000359005 SOCS7O14512 581 aa14.94□□□□□ -0.02
TRAPPC4-201ENST00000359005 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC4-201ENST00000359005 USP47Q96K76 1375 aa14.94□□□□□ -0.02
TRAPPC4-201ENST00000359005 SETBP1Q9Y6X0 1596 aa14.94□□□□□ -0.02
TRAPPC4-201ENST00000359005 NCOA3Q9Y6Q9 1424 aa14.93□□□□□ -0.02
TRAPPC4-201ENST00000359005 TRPM1Q7Z4N2 1603 aa14.93□□□□□ -0.02
TRAPPC4-201ENST00000359005 CHD2O14647 1828 aaKnown RBP14.93□□□□□ -0.02
TRAPPC4-201ENST00000359005 MED1Q15648 1581 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC4-201ENST00000359005 ATF3P18847 181 aa14.92□□□□□ -0.02
TRAPPC4-201ENST00000359005 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
TRAPPC4-201ENST00000359005 MYOM2P54296 1465 aa14.91□□□□□ -0.02
TRAPPC4-201ENST00000359005 GPRASP1Q5JY77 1395 aa14.91□□□□□ -0.02
TRAPPC4-201ENST00000359005 ROBO2Q9HCK4 1378 aa14.91□□□□□ -0.02
TRAPPC4-201ENST00000359005 ANP32CO43423 234 aa14.91□□□□□ -0.02
TRAPPC4-201ENST00000359005 DDX10Q13206 875 aaKnown RBP14.91□□□□□ -0.02
TRAPPC4-201ENST00000359005 BRINP3Q76B58 766 aa14.91□□□□□ -0.02
TRAPPC4-201ENST00000359005 DIP2AQ14689 1571 aa14.9□□□□□ -0.02
TRAPPC4-201ENST00000359005 DDX17Q92841 729 aaKnown RBP14.9□□□□□ -0.02
TRAPPC4-201ENST00000359005 KIAA1210Q9ULL0 1709 aa14.89□□□□□ -0.03
TRAPPC4-201ENST00000359005 EIF3AQ14152 1382 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-201ENST00000359005 CENPBP07199 599 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-201ENST00000359005 TMEM132EQ6IEE7 984 aa14.88□□□□□ -0.03
TRAPPC4-201ENST00000359005 MIER1Q8N108 512 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms