RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 A2ML1A8K2U0 1454 aa10.57□□□□□ -0.72
TNFSF11-202ENST00000358545 CLIP1P30622 1438 aa10.56□□□□□ -0.72
TNFSF11-202ENST00000358545 RNF17Q9BXT8 1623 aaKnown RBP10.56□□□□□ -0.72
TNFSF11-202ENST00000358545 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
TNFSF11-202ENST00000358545 MAP3K13O43283 966 aa10.54□□□□□ -0.72
TNFSF11-202ENST00000358545 IFNL1Q8IU54 200 aa10.54□□□□□ -0.72
TNFSF11-202ENST00000358545 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
TNFSF11-202ENST00000358545 WDR70Q9NW82 654 aa10.54□□□□□ -0.72
TNFSF11-202ENST00000358545 CDK11AQ9UQ88 783 aaPredicted RBP10.54□□□□□ -0.72
TNFSF11-202ENST00000358545 CD44P16070 742 aaKnown RBP10.53□□□□□ -0.72
TNFSF11-202ENST00000358545 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
TNFSF11-202ENST00000358545 ATP7AQ04656 1500 aa10.53□□□□□ -0.72
TNFSF11-202ENST00000358545 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
TNFSF11-202ENST00000358545 INO80Q9ULG1 1556 aaPredicted RBP10.53□□□□□ -0.72
TNFSF11-202ENST00000358545 IQGAP1P46940 1657 aa10.53□□□□□ -0.72
TNFSF11-202ENST00000358545 SYNMO15061 1565 aa10.52□□□□□ -0.72
TNFSF11-202ENST00000358545 FMN1Q68DA7 1419 aa10.52□□□□□ -0.73
TNFSF11-202ENST00000358545 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
TNFSF11-202ENST00000358545 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
TNFSF11-202ENST00000358545 PSEN1P49768 467 aa10.51□□□□□ -0.73
TNFSF11-202ENST00000358545 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
TNFSF11-202ENST00000358545 ADGBQ8N7X0 1667 aa10.51□□□□□ -0.73
TNFSF11-202ENST00000358545 A2MP01023 1474 aa10.5□□□□□ -0.73
TNFSF11-202ENST00000358545 XIRP1Q702N8 1843 aaKnown RBP10.5□□□□□ -0.73
TNFSF11-202ENST00000358545 DEPDC5O75140 1603 aa10.5□□□□□ -0.73
TNFSF11-202ENST00000358545 GGT6Q6P531 493 aa10.49□□□□□ -0.73
TNFSF11-202ENST00000358545 POTEAQ6S8J7 498 aa10.49□□□□□ -0.73
TNFSF11-202ENST00000358545 LRRC7Q96NW7 1537 aa10.49□□□□□ -0.73
TNFSF11-202ENST00000358545 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
TNFSF11-202ENST00000358545 SPAG9O60271 1321 aaKnown RBP10.48□□□□□ -0.73
TNFSF11-202ENST00000358545 NPHP4O75161 1426 aaPredicted RBP10.48□□□□□ -0.73
TNFSF11-202ENST00000358545 ARHGAP35Q9NRY4 1499 aa10.48□□□□□ -0.73
TNFSF11-202ENST00000358545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.73
TNFSF11-202ENST00000358545 TNRQ92752 1358 aa10.47□□□□□ -0.73
TNFSF11-202ENST00000358545 KCNV2Q8TDN2 545 aa10.46□□□□□ -0.74
TNFSF11-202ENST00000358545 ZNF777Q9ULD5 760 aaPredicted RBP10.46□□□□□ -0.74
TNFSF11-202ENST00000358545 EEA1Q15075 1411 aa10.46□□□□□ -0.74
TNFSF11-202ENST00000358545 MED14O60244 1454 aa10.46□□□□□ -0.74
TNFSF11-202ENST00000358545 ZC3H13Q5T200 1668 aaKnown RBP10.46□□□□□ -0.74
TNFSF11-202ENST00000358545 ANKLE2Q86XL3 938 aa10.45□□□□□ -0.74
TNFSF11-202ENST00000358545 UGGT1Q9NYU2 1555 aa10.45□□□□□ -0.74
TNFSF11-202ENST00000358545 PZPP20742 1482 aa10.44□□□□□ -0.74
TNFSF11-202ENST00000358545 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
TNFSF11-202ENST00000358545 FBXO31Q5XUX0 539 aaPredicted RBP10.43□□□□□ -0.74
TNFSF11-202ENST00000358545 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
TNFSF11-202ENST00000358545 KDM5DQ9BY66 1539 aa10.42□□□□□ -0.74
TNFSF11-202ENST00000358545 FAM135AQ9P2D6 1515 aa10.42□□□□□ -0.74
TNFSF11-202ENST00000358545 CCDC18Q5T9S5 1454 aa10.42□□□□□ -0.74
TNFSF11-202ENST00000358545 ROBO1Q9Y6N7 1651 aa10.42□□□□□ -0.74
TNFSF11-202ENST00000358545 GPATCH8Q9UKJ3 1502 aaKnown RBP10.41□□□□□ -0.74
TNFSF11-202ENST00000358545 NLRP1Q9C000 1473 aa10.41□□□□□ -0.74
TNFSF11-202ENST00000358545 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
TNFSF11-202ENST00000358545 CFAP65Q6ZU64 1925 aaKnown RBP10.4□□□□□ -0.74
TNFSF11-202ENST00000358545 SRCAPQ6ZRS2 3230 aa10.4□□□□□ -0.74
TNFSF11-202ENST00000358545 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
TNFSF11-202ENST00000358545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
TNFSF11-202ENST00000358545 THEMISQ8N1K5 641 aaPredicted RBP10.39□□□□□ -0.75
TNFSF11-202ENST00000358545 EFCAB3Q8N7B9 438 aa10.39□□□□□ -0.75
TNFSF11-202ENST00000358545 MS4A3Q96HJ5 214 aa10.39□□□□□ -0.75
TNFSF11-202ENST00000358545 KIAA1107Q9UPP5 1409 aa10.39□□□□□ -0.75
TNFSF11-202ENST00000358545 PPP1R37O75864 691 aa10.38□□□□□ -0.75
TNFSF11-202ENST00000358545 NLRP6P59044 892 aa10.38□□□□□ -0.75
TNFSF11-202ENST00000358545 TRPC6Q9Y210 931 aa10.38□□□□□ -0.75
TNFSF11-202ENST00000358545 SOX12O15370 315 aa10.38□□□□□ -0.75
TNFSF11-202ENST00000358545 LMOD2Q6P5Q4 547 aa10.38□□□□□ -0.75
TNFSF11-202ENST00000358545 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
TNFSF11-202ENST00000358545 PHLPP1O60346 1717 aa10.37□□□□□ -0.75
TNFSF11-202ENST00000358545 UBR1Q8IWV7 1749 aa10.37□□□□□ -0.75
TNFSF11-202ENST00000358545 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
TNFSF11-202ENST00000358545 UPF1Q92900 1129 aaKnown RBP eCLIP10.37□□□□□ -0.75
TNFSF11-202ENST00000358545 FAM135BQ49AJ0 1406 aa10.36□□□□□ -0.75
TNFSF11-202ENST00000358545 CASKIN1Q8WXD9 1431 aa10.36□□□□□ -0.75
TNFSF11-202ENST00000358545 UBTFP17480 764 aaKnown RBP10.36□□□□□ -0.75
TNFSF11-202ENST00000358545 ARHGEF1Q92888 912 aaKnown RBP10.35□□□□□ -0.75
TNFSF11-202ENST00000358545 PHF8Q9UPP1 1060 aa10.35□□□□□ -0.75
TNFSF11-202ENST00000358545 SCAF11Q99590 1463 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 KIF3BO15066 747 aa10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 CFDP1Q9UEE9 299 aaPredicted RBP10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 E2F4Q16254 413 aa10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
TNFSF11-202ENST00000358545 TMEM106CQ9BVX2 250 aa10.32□□□□□ -0.76
TNFSF11-202ENST00000358545 CEP152O94986 1710 aa10.31□□□□□ -0.76
TNFSF11-202ENST00000358545 FYCO1Q9BQS8 1478 aa10.31□□□□□ -0.76
TNFSF11-202ENST00000358545 CCNB3Q8WWL7 1395 aa10.31□□□□□ -0.76
TNFSF11-202ENST00000358545 MAP3K1Q13233 1512 aa10.31□□□□□ -0.76
TNFSF11-202ENST00000358545 RTEL1-TNFRSF6BF6WH68 1400 aa10.31□□□□□ -0.76
TNFSF11-202ENST00000358545 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
TNFSF11-202ENST00000358545 MBD5Q9P267 1494 aa10.31□□□□□ -0.76
TNFSF11-202ENST00000358545 TMEM132AQ24JP5 1023 aa10.3□□□□□ -0.76
TNFSF11-202ENST00000358545 LRP6O75581 1613 aa10.3□□□□□ -0.76
TNFSF11-202ENST00000358545 COL16A1Q07092 1604 aaPredicted RBP10.3□□□□□ -0.76
TNFSF11-202ENST00000358545 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
TNFSF11-202ENST00000358545 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
TNFSF11-202ENST00000358545 ZNF644Q9H582 1327 aaPredicted RBP10.3□□□□□ -0.76
TNFSF11-202ENST00000358545 TMEM94Q12767 1356 aa10.3□□□□□ -0.76
TNFSF11-202ENST00000358545 ABCC3O15438 1527 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms