RNA–Protein interactions for RNA: ENST00000358338.7

CACNA1E-202, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 14,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-202ENST00000358338 KIF7Q2M1P5 1343 aa8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 GAPVD1Q14C86 1478 aa8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 HMGN5P82970 282 aaKnown RBP8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 CCP110O43303 1012 aa8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 MRE11P49959 708 aa8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 VSIG10Q8N0Z9 540 aa8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 HNRNPMP52272 730 aaKnown RBP eCLIP8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 NOM1Q5C9Z4 860 aaKnown RBP8.15□□□□□ -1.1
CACNA1E-202ENST00000358338 ZNF428Q96B54 188 aa8.15□□□□□ -1.11
CACNA1E-202ENST00000358338 NAT10Q9H0A0 1025 aaKnown RBP8.15□□□□□ -1.11
CACNA1E-202ENST00000358338 EFCAB5A4FU69 1503 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 AKAP17AQ02040 695 aaKnown RBP8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 ANKRD45Q5TZF3 282 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 PLEKHH2Q8IVE3 1493 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 IGF1RP08069 1367 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 FAM184AQ8NB25 1140 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 SENP3-EIF4A1A0A087X0R7 540 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 PDE3AQ14432 1141 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 LRRC9Q6ZRR7 1453 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 ACBD3Q9H3P7 528 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 CCDC146Q8IYE0 955 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 IL27Q8NEV9 243 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 CSB-PGBD3P0DP91 1061 aa8.14□□□□□ -1.11
CACNA1E-202ENST00000358338 SYNE3Q6ZMZ3 975 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 SENP3Q9H4L4 574 aaPredicted RBP8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 APBB1O00213 710 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 PAK3O75914 559 aaPredicted RBP8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 ANKRD50Q9ULJ7 1429 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 PDCP20941 246 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 NGDNQ8NEJ9 315 aaKnown RBP8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 CCDC66A2RUB6 948 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 HIP1O00291 1037 aa8.13□□□□□ -1.11
CACNA1E-202ENST00000358338 SLC4A10Q6U841 1118 aa8.12□□□□□ -1.11
CACNA1E-202ENST00000358338 RASSF8Q8NHQ8 419 aa8.12□□□□□ -1.11
CACNA1E-202ENST00000358338 CWC15Q9P013 229 aaKnown RBP8.12□□□□□ -1.11
CACNA1E-202ENST00000358338 MBD3O95983 291 aa8.12□□□□□ -1.11
CACNA1E-202ENST00000358338 C1orf141Q5JVX7 400 aa8.12□□□□□ -1.11
CACNA1E-202ENST00000358338 ARGLU1Q9NWB6 273 aaPredicted RBP8.12□□□□□ -1.11
CACNA1E-202ENST00000358338 PSMA5P28066 241 aa8.12□□□□□ -1.11
CACNA1E-202ENST00000358338 DDX58O95786 925 aaKnown RBP8.11□□□□□ -1.11
CACNA1E-202ENST00000358338 CWC22Q9HCG8 908 aaKnown RBP8.11□□□□□ -1.11
CACNA1E-202ENST00000358338 DIAPH1O60610 1272 aaKnown RBP8.11□□□□□ -1.11
CACNA1E-202ENST00000358338 CDC45O75419 566 aa8.11□□□□□ -1.11
CACNA1E-202ENST00000358338 CCDC47Q96A33 483 aaKnown RBP8.11□□□□□ -1.11
CACNA1E-202ENST00000358338 CEP89Q96ST8 783 aa8.11□□□□□ -1.11
CACNA1E-202ENST00000358338 TRIM29Q14134 588 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 RABEP1Q15276 862 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 AMOTL1Q8IY63 956 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 CPLX1O14810 134 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 EXOC6Q8TAG9 804 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 SOX12O15370 315 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 CDR1P51861 262 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 CHMP3Q9Y3E7 222 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 CRBNQ96SW2 442 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 PLEKHG5O94827 1062 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 C22orf23Q9BZE7 217 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 C9orf78Q9NZ63 289 aaPredicted RBP8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 NCAPD3P42695 1498 aa8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 DHX16O60231 1041 aaKnown RBP8.1□□□□□ -1.11
CACNA1E-202ENST00000358338 EHBP1L1Q8N3D4 1523 aa8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 CLSTN1O94985 981 aa8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 IFIT2P09913 472 aaKnown RBP8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 TPD52L1Q16890 204 aaPredicted RBP8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 PKNOX2Q96KN3 472 aa8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 TSPYL1Q9H0U9 437 aa8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 TRDNQ13061 729 aa8.09□□□□□ -1.11
CACNA1E-202ENST00000358338 CAVIN1Q6NZI2 390 aaKnown RBP8.09□□□□□ -1.12
CACNA1E-202ENST00000358338 TULP1O00294 542 aaPredicted RBP8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 APAF1O14727 1248 aa8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 CCDC73Q6ZRK6 1079 aa8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 NCOA2Q15596 1464 aa8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 RIPK4P57078 832 aa8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 G3BP1Q13283 466 aaKnown RBP eCLIP8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 TTC5Q8N0Z6 440 aa8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 SAFBQ15424 915 aaKnown RBP eCLIP8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 CIZ1Q9ULV3 898 aaPredicted RBP8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 TRAK1Q9UPV9 953 aa8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 FGD5Q6ZNL6 1462 aa8.08□□□□□ -1.12
CACNA1E-202ENST00000358338 GCC1Q96CN9 775 aa8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 NASPP49321 788 aaPredicted RBP8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 RILPL2Q969X0 211 aa8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 BRMS1Q9HCU9 246 aa8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 WDR63Q8IWG1 891 aa8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 NOL10Q9BSC4 688 aaKnown RBP8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 ANO2Q9NQ90 1003 aa8.07□□□□□ -1.12
CACNA1E-202ENST00000358338 AK7Q96M32 723 aa8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 TAOK2Q9UL54 1235 aa8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 MYO6Q9UM54 1294 aa8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 TEFQ10587 303 aa8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 CNTROBQ8N137 903 aa8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 PIP4K2AP48426 406 aaPredicted RBP8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 MLECQ14165 292 aa8.06□□□□□ -1.12
CACNA1E-202ENST00000358338 MCTP1Q6DN14 999 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms